Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01193 ATGAAGGATGGAACCTCTGGACATGCATGGATAAATTATAACTCCACAACAAAGAAATTGAGTGTATTTTTAACTTATGATCAAAGTACAGTGTTTGATGGAAATTACACCCTTTCATACATGGTTGATTTGAGGGAGGTGCTGACCGAGAAAGTTAGAGTTGGTTTCTCTGCTGCCACAGGTGACTGGGTTGAAACACATAACATAAATTCTTGGTCATTCAGCTCAAGCTTGGAAGATGATGATGAGAAAAAGAAAGGCAAAGCAGCGTTAATAATTGGTTTAACTGTAAGCTTGGGTATTTTGACTTGCGGACTAGGTTTGCTTATGTTTGTCTCTTGGAAAAGAAGAGTTGGCATCAAGAAAGGTGACTTAGGCATGGATATGGATGATGAATTTTTGAGAGAAAGTGGGCCAAAGAGGTTTAGTTATCGAGAACTGGCTCGGGCGACAAACAATTTCAACGAGGGAGGGAAGCTCGGAGAAGGCGGATTTGGAGGTGTTTTCAAAGGGTTGCTAAGTGAATCCAAGACCAGAGTGGCTGTAAAGAGGGTCTCAAGAGGATCAAAGCAAGGTCAGAAGGAGTATGTGTCCGAAGTGAGGATCATCAGTCGATTGAGACATAGAAATTTGGTTCAACTCATTGGGTGGTGTCACGAACGAGGGGAACTTCTTCTGGTCTACGAGTTCATGCCCAATGGAAGTCTAGACACCCATCTTTTTGGAAGAAAAGAGATCCTAACTTGGACAGTGCGGTATAAAATAGTGACTGGTTTGGCTTCTGCTCTGTTGTACCTTCACGAAGAATGGGAACAATGCGTTGTCCACAGGGATATCAAGTCGAGCAATGTCATGTTGGACTTAAATTTCAATGCCAAGCTCGGAGATTTTGGTCTTGCAAGGCTTGTTGACCATGATTTGGGTTCTCAAACGACTGTTTTAGCAGGAACCATGGGCTACCTAGCTCCGGAATGTGTCACCATTGGCAAGGCTAGTAAGGAGTCTGATGTCTACAGTTTTGGGGTCGTTTCTCTCGAAATTGCCTGTGGAAGACGACCAGTCCAACTGCAGGCCGAACCTAGTCAGATAAGGCTGATAGAGTGGGTTTGGGACCTCTATGGAAATGGCCTGGTCTTAGAAGCTGCAGATAAGGGGCTTATGGCAGAGTTTGATGAAAGACAAATGGAGTGTTTGTTGGTGGTTGGCTTGTGGTGTTGCCATCCAGATTACACCATCCGACCGTCTATTAAACAAGTGATTAACGTGCTTAATTTCGAAGCACCATTGCCGTGTCTACCTTCAAAGCTGCCTGTGCCTACGTACTATGCACCGCCATTGCATTTGTGCAATTTTTCATACACGTCTTCAGGTAAGGCGGAAACATTCAAAGATCGTTCCAAGTGTTCTTGTAGCAGTTGCACGACTTTCTCTTCGTTGTCGGCTGGCTCTGATAAATCTCTACTGCATTCTCAGCCTTATGTCTAG 1485 44.24 MKDGTSGHAWINYNSTTKKLSVFLTYDQSTVFDGNYTLSYMVDLREVLTEKVRVGFSAATGDWVETHNINSWSFSSSLEDDDEKKKGKAALIIGLTVSLGILTCGLGLLMFVSWKRRVGIKKGDLGMDMDDEFLRESGPKRFSYRELARATNNFNEGGKLGEGGFGGVFKGLLSESKTRVAVKRVSRGSKQGQKEYVSEVRIISRLRHRNLVQLIGWCHERGELLLVYEFMPNGSLDTHLFGRKEILTWTVRYKIVTGLASALLYLHEEWEQCVVHRDIKSSNVMLDLNFNAKLGDFGLARLVDHDLGSQTTVLAGTMGYLAPECVTIGKASKESDVYSFGVVSLEIACGRRPVQLQAEPSQIRLIEWVWDLYGNGLVLEAADKGLMAEFDERQMECLLVVGLWCCHPDYTIRPSIKQVINVLNFEAPLPCLPSKLPVPTYYAPPLHLCNFSYTSSGKAETFKDRSKCSCSSCTTFSSLSAGSDKSLLHSQPYV 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17878308 17879792 + Bma017617.1 Bma03g01193 79866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01193 494 Pfam Protein kinase domain 155 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01193 494 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 176 IPR013320 -
Bma03g01193 494 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 3 474 - -
Bma03g01193 494 SMART serkin_6 154 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01193 494 Gene3D Phosphorylase Kinase; domain 1 139 230 - -
Bma03g01193 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Bma03g01193 494 Gene3D - 1 93 - -
Bma03g01193 494 ProSitePatterns Legume lectins alpha-chain signature. 48 57 IPR000985 -
Bma03g01193 494 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Bma03g01193 494 Pfam Legume lectin domain 2 86 IPR001220 GO:0030246
Bma03g01193 494 Gene3D Transferase(Phosphotransferase) domain 1 231 443 - -
Bma03g01193 494 SUPERFAMILY Protein kinase-like (PK-like) 138 444 IPR011009 -
Bma03g01193 494 ProSiteProfiles Protein kinase domain profile. 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01193 494 PANTHER - 3 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01193 Bma-Chr3:17878308 Bma12g00328 Bma-Chr12:5269475 1.13E-171 dispersed
Bma03g01193 Bma-Chr3:17878308 Bma10g00593 Bma-Chr10:7271495 3.75E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66423 PF00069 Pkinase 1.40E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01193 - - jre:108982582 677.937