Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01194 | ATGGCAAAGTCACCGGAGACAGAGCACCCAAACAAGGCCTGTGGATGGGCTGCCAGAGACACCTCTGGCGTTCTTTCCCCTTTCCATTTCTCTCGAAGGAAGGCGGGTGAGAAAGATGTGGCGTTCAAAGTGCTTTATTGTGGAATTTGTCACAGCGACCTTCACATGCTGAAAAACGAATGGGGCAGTTCCGTCTATCCTCTCGTTCCTGGGCATGAAATAGTGGGAGTAGTGACAGAGGTTGGGAAGAAAGTAGAAAAATTCAAAGTTGGAGATAGAGTCGGCGTGGGTTGTATGGTAGGATCGTGCCGATCTTGTGGCAGCTGTGCGCAAGACCTCGAAAACTACTGCTCCAAAATGATTCTCACCTATGCAGCAAAAGACACCGATGGAACGATCACGTACGGAGGCTACTCCGACCACATGGTGGCCGATGAACACTTCATTGTCCGCATCCCAGACGGCCTCCCTCTCGACGCATCTGCACCGCTCCTCTGTGCTGGCATAACCGTTTATAGCCCGTTGAGATATTACGGCCTCGACAAGCCCGGCATGCATATCGGTATAGTTGGCCTGGGCGGGCTCGGCCATGTGGGCGTCAAGTTTGCCAAGGCTTTTGGTGCGAAGGTCACTGTGATTAGTACTTCCCCTGCTAAGAAAGAGGAGGCTATTCAACGTCTCGGCGCTGACTCCTTTTTGGTTAGCAGGGACCAGACCCAATTGCAGGCTGAAATGGGCACGTTTGATGGTATCATTGATACTGTGTCGGCTGCCCACCCTCTTGTGCCGCTGCTTGGCTTGCTGAAACCACATGGGAAGCTTGTCATGGTCGGTGCTCCGGAGAAGCCATTGGAGCTTCCGGCCTTCGCCTTGCTCATGGGTATGAAATTAGTGGGGGGTAGCTGCATTGGAGGAATGAAGGAGACACAGGAGATGATCGATTTTGCAGCGAAGCATGGGATCGCGGCGGATGTGGAGGTGATTAAGATGGACTACGTGAATGAAGCCATGGCTCGGATGCTGAAAGCAGACGTGAAATATCGGTTCGTCCTCGACGTCGGCAACACCTTGAAGCCTAGCACTTAA | 1086 | 52.67 | MAKSPETEHPNKACGWAARDTSGVLSPFHFSRRKAGEKDVAFKVLYCGICHSDLHMLKNEWGSSVYPLVPGHEIVGVVTEVGKKVEKFKVGDRVGVGCMVGSCRSCGSCAQDLENYCSKMILTYAAKDTDGTITYGGYSDHMVADEHFIVRIPDGLPLDASAPLLCAGITVYSPLRYYGLDKPGMHIGIVGLGGLGHVGVKFAKAFGAKVTVISTSPAKKEEAIQRLGADSFLVSRDQTQLQAEMGTFDGIIDTVSAAHPLVPLLGLLKPHGKLVMVGAPEKPLELPAFALLMGMKLVGGSCIGGMKETQEMIDFAAKHGIAADVEVIKMDYVNEAMARMLKADVKYRFVLDVGNTLKPST | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 17950504 | 17952292 | + | Bma017620.1 | Bma03g01194 | 79867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01194 | 361 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
Bma03g01194 | 361 | Gene3D | - | 167 | 323 | - | - | |
Bma03g01194 | 361 | Gene3D | - | 16 | 353 | - | - | |
Bma03g01194 | 361 | PANTHER | ALDEHYDE REDUCTASE | 2 | 359 | - | - | |
Bma03g01194 | 361 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 151 | IPR013154 | - | |
Bma03g01194 | 361 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491 | |
Bma03g01194 | 361 | Pfam | Zinc-binding dehydrogenase | 194 | 317 | IPR013149 | - | |
Bma03g01194 | 361 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 156 | 321 | IPR036291 | - | |
Bma03g01194 | 361 | CDD | CAD1 | 15 | 352 | - | - | |
Bma03g01194 | 361 | SUPERFAMILY | GroES-like | 20 | 184 | IPR011032 | - | |
Bma03g01194 | 361 | PANTHER | LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE | 2 | 359 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01039 | Bma-Chr3:12141113 | Bma03g01194 | Bma-Chr3:17950504 | 1.39E-170 | dispersed | |
Bma03g01194 | Bma-Chr3:17950504 | Bma06g00655 | Bma-Chr6:35204886 | 0 | dispersed | |
Bma15g00757 | Bma-Chr15:15622763 | Bma03g01194 | Bma-Chr3:17950504 | 1.09E-19 | dispersed | |
Bma15g00759 | Bma-Chr15:15661955 | Bma03g01194 | Bma-Chr3:17950504 | 5.75E-20 | dispersed | |
Bma04g00805 | Bma-Chr4:9499246 | Bma03g01194 | Bma-Chr3:17950504 | 1.20E-15 | transposed | |
Bma05g00197 | Bma-Chr5:5452839 | Bma03g01194 | Bma-Chr3:17950504 | 4.50E-12 | transposed | |
Bma15g01079 | Bma-Chr15:43134402 | Bma03g01194 | Bma-Chr3:17950504 | 2.81E-77 | wgd | |
Bma03g01194 | Bma-Chr3:17950504 | Bma06g00315 | Bma-Chr6:5280906 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01194 | - | K23232 | mcha:111005856 | 578.941 |