Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01256 ATGACTACCACGACTACTAATGTTGGCGGCGGTGATGAGGATAGGGTTTTGGCCGCTGCGCAGCAGATCTTGAAGAGTCTAAATGCTCCGAAGGAGGTTAGGGAAGATATGCTTTTGATCTTCTCGAATTTCGATAATCGTCTTTCGAATATCACTCAGTTGATCAATAGTGAGGATATGAAGAACGAGAACCGTTACGAGGCGGCTGAAAAGGTGATTCTTCGCTGGGAGTCCAATTCGGATGCTTCGAGGAATTCTCTTCATTGGGAGGAGTCGCCGGATGAGGCGGCTGAATATTTGTCGGCTGTGGATGAAGTGCTCCAGTTGATTGAGGATCTTTCGCTTCGGTCGGATTCTTCGGAGATTGTAGACCGTGCCTCGGACACAATCCAGGTTGCCATGGCCAGGCTTGAGGAAGAATTCCGCCATATCTTGATTCGAAGCACAGTCCCTCTAGATGCTGATCACCTCCATGTTTCAATCCGCAGGGTCTCACTATCTTTTGCATCCAACTATGGAGATATTGACGATGAATTTGAGAGCTTTGAGGAGGTTGATCGTGATTCTGGACGATTTCATGAGAGAGGTGCGAGTTTGGGGGATGACGTGTGGGTTGATTTGATACATCCCGAAGCAGTCGTGGAATTGAAAGAGATTGCAAACAGGATGGTACGCTCTGGTTATGAAAGAGAGTGTGTTCAGGTCTATAGCACCATCCGGCGGGAAGTTTTGGACGAATGTCTAGGGATTCTTGGAATTGAAAAGCTGAGCATTGAGGAGGTCCAGAAAATAGACTGGAAAATTTTGGACGAGAAAATGAAGAAATGGAGTCTAGCAGTTAAAATTGTGGTTCGAGTGCTTTTCATGGGTGAAAAACGACTTTGTGATAATTTTTTTGATGGGTCTGATGTGTCTAAGGAGGTTTGCTTCAATGAGACTGCAAAAGGGTGTGTGATGCAGTTGTTGAATTTTGGGGAGGCGGTGGCCATTGGGGAAAGGTCCCCAGAGAAGTTATTTAGAATCTTGAATATGTATGATTCTTTGGCTAATGTTTTACCGGATTTACAAGCAATGGTTACTGATGAGTTTGTCATCAGCGAGGCACGTGAAGTGCTATCTGGCCTGGCAGAGGCATCCCGAGGGACCTTTGCGGTGTTCGAGAATGCTGTTCAGTGTGAGACATCAAAGAAGCCCATGATAAATGCTGAGATTCATCCTCTTACTCGTTATGTGATGAATTATGTAAGATTGCTTGTGGATTACCGTTCTATATTAGATTCACTCTTGGAAAATGGGGAAGAAGAATTGAATTGCGTAAAGAATGAGAATGGTGATAATTTTGAGTTAGACTACACGTCACCTTTAGCCCATCGCCTGTTTTTGTTGATATCATGTCTGGAAGCCAATCTTGAAGAGAAATCAAAACTTTATGGAGATGGGGCGATACAGTACGTATTTCTTATGAACAATATTTTATACATAGTTCAAAAGGTGAAAGATTCTGAGCTTCGCAAGCTATTGGGTGATAACTGGGTTCGGAAACGGCGCGGTAAGATTCGCCAGCTCGCAACCAGTTATATTCGAGCTTCTTGGACCAAGGTACTGTCTTATTTGAACGATGGAGCTGGTACTGGTGGGAGTTCAAGTAATGCCTTGAAGGTGGCTTTAAAGGAAAGACTCAAGAATTTCAATGCTGGATTTGAGGAAATCTATAGATCCCAGTCGGGTTGGAAAGTACATGATCCTCAACTTAGCGAAGATCTACGAATCTCTGTATCTGAGAAGGTCATTCCGGCTTACCGCTCCTTCATGGGGAAGTTTGAAAAGCAGCTAGAGAGTGGAAGACATGCTGAGAAGTATGTTAAATACACAGCAGATGATATAGGAAATTATCTGTTGGATTTGTTTGAAGGAACACCTCGCATTCTACACCACCTACGAAGAAAAAGTACATAA 1956 43.81 MTTTTTNVGGGDEDRVLAAAQQILKSLNAPKEVREDMLLIFSNFDNRLSNITQLINSEDMKNENRYEAAEKVILRWESNSDASRNSLHWEESPDEAAEYLSAVDEVLQLIEDLSLRSDSSEIVDRASDTIQVAMARLEEEFRHILIRSTVPLDADHLHVSIRRVSLSFASNYGDIDDEFESFEEVDRDSGRFHERGASLGDDVWVDLIHPEAVVELKEIANRMVRSGYERECVQVYSTIRREVLDECLGILGIEKLSIEEVQKIDWKILDEKMKKWSLAVKIVVRVLFMGEKRLCDNFFDGSDVSKEVCFNETAKGCVMQLLNFGEAVAIGERSPEKLFRILNMYDSLANVLPDLQAMVTDEFVISEAREVLSGLAEASRGTFAVFENAVQCETSKKPMINAEIHPLTRYVMNYVRLLVDYRSILDSLLENGEEELNCVKNENGDNFELDYTSPLAHRLFLLISCLEANLEEKSKLYGDGAIQYVFLMNNILYIVQKVKDSELRKLLGDNWVRKRRGKIRQLATSYIRASWTKVLSYLNDGAGTGGSSSNALKVALKERLKNFNAGFEEIYRSQSGWKVHDPQLSEDLRISVSEKVIPAYRSFMGKFEKQLESGRHAEKYVKYTADDIGNYLLDLFEGTPRILHHLRRKST 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21081145 21083100 + Bma017718.1 Bma03g01256 79929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01256 651 Pfam Exo70 exocyst complex subunit 274 633 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma03g01256 651 SUPERFAMILY Cullin repeat-like 73 637 IPR016159 -
Bma03g01256 651 Gene3D Exocyst complex component Exo70 72 643 - -
Bma03g01256 651 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 48 650 - -
Bma03g01256 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 48 650 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01256 Bma06g00256 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01893 Bma-Chr1:69735239 Bma03g01256 Bma-Chr3:21081145 6.62E-79 dispersed
Bma03g01256 Bma-Chr3:21081145 Bma06g00256 Bma-Chr6:3506836 0 dispersed
Bma07g00116 Bma-Chr7:1844124 Bma03g01256 Bma-Chr3:21081145 7.25E-99 dispersed
Bma08g00969 Bma-Chr8:48666134 Bma03g01256 Bma-Chr3:21081145 6.77E-94 dispersed
Bma14g00483 Bma-Chr14:5467529 Bma03g01256 Bma-Chr3:21081145 7.87E-104 dispersed
Bma01g01069 Bma-Chr1:11259933 Bma03g01256 Bma-Chr3:21081145 8.27E-145 transposed
Bma06g00151 Bma-Chr6:1957129 Bma03g01256 Bma-Chr3:21081145 5.59E-30 transposed
Bma12g01079 Bma-Chr12:43094469 Bma03g01256 Bma-Chr3:21081145 0 transposed
Bma03g01256 Bma-Chr3:21081145 Bma06g00255 Bma-Chr6:3501444 9.30E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01256 K07195 - mnt:21411514 937.176