Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01258 ATGGCTGTCGTGTTTCATGACCTTAGCTCTGCTTCTGGCCTTAAGAAACTAGATGAGTACCTGCTCCCTCGCAGTTACATTACCGGGTATCAAGCCTCTAAGGATGATATTACGGTCCACGCAGCCCTCCAGGGTGCTCCATCTGCTGAATTCGTTAACTTGTCCCGGTGGTACAATCATATTGAAGCACTCTTGAGAATTTCGGGTGTATCTGGAGAAGGTTCTGGTGTTATTGTTTCTAGTTGTGCTACCATTACAGAGGAAGCTGTTGCAACACCACCTGCTGGTGACTCAAAGATTATTTTACTAACTGCCAAAACATATGATTCTCAGGCTGCTGCTGTTGAGGATGATGATGATGATATTGATCTATTTGGTGAAGAAACTGAAGAGGAGAAGAAGGTTGCTGAAGAAAGAGCTGCTGCTGCTAAGTCATCGGCAAAGAAGAAAGAGTCTGGCAAGTCATCAGTTTTGTTGGATGTGAAGCCATGGGATGATGAGACTGACATGAAAAAACTTGAAGAAGCAGTGAGAGGTGTTGAAATGGAAGGATTGCTTTGGGGGGCATCCAAGCTCATGCCTGTTGGATATGGTATCAAGAAATTGCAGATAATGATGACTATTGTGGATGACCTGGTGTCTGTTGACAATCTTATCGAGGAGCATCTCACAGTCGAGCCAATCAACGAGTATGTTCAGAGCTGTGACATTGTGGCATTCAACAAAATCTGTAAGTTCTTCTTTGTACTTTTTCTCTCAAACAAGAAGCATCAGCATGATATAATTGCATTTACGATCTTGTGA 804 43.16 MAVVFHDLSSASGLKKLDEYLLPRSYITGYQASKDDITVHAALQGAPSAEFVNLSRWYNHIEALLRISGVSGEGSGVIVSSCATITEEAVATPPAGDSKIILLTAKTYDSQAAAVEDDDDDIDLFGEETEEEKKVAEERAAAAKSSAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVEMEGLLWGASKLMPVGYGIKKLQIMMTIVDDLVSVDNLIEEHLTVEPINEYVQSCDIVAFNKICKFFFVLFLSNKKHQHDIIAFTIL 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21187580 21189518 - Bma017721.1 Bma03g01258 79931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01258 267 Pfam EF-1 guanine nucleotide exchange domain 156 243 IPR014038 GO:0003746|GO:0006414
Bma03g01258 267 SUPERFAMILY eEF-1beta-like 151 243 IPR036219 -
Bma03g01258 267 Gene3D - 147 243 IPR014717 -
Bma03g01258 267 Gene3D - 5 75 - -
Bma03g01258 267 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 249 - -
Bma03g01258 267 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 249 - -
Bma03g01258 267 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 232 243 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bma03g01258 267 Coils Coil 126 146 - -
Bma03g01258 267 CDD EF1B 157 243 IPR014038 GO:0003746|GO:0006414
Bma03g01258 267 SMART EF1_GNE_2 154 243 IPR014038 GO:0003746|GO:0006414
Bma03g01258 267 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 118 126 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bma03g01258 267 SUPERFAMILY GST C-terminal domain-like 11 68 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01258 Bma-Chr3:21187580 Bma14g00801 Bma-Chr14:8956557 9.40E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01258 K03232 - mnt:21388962 336.65