Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01258 | ATGGCTGTCGTGTTTCATGACCTTAGCTCTGCTTCTGGCCTTAAGAAACTAGATGAGTACCTGCTCCCTCGCAGTTACATTACCGGGTATCAAGCCTCTAAGGATGATATTACGGTCCACGCAGCCCTCCAGGGTGCTCCATCTGCTGAATTCGTTAACTTGTCCCGGTGGTACAATCATATTGAAGCACTCTTGAGAATTTCGGGTGTATCTGGAGAAGGTTCTGGTGTTATTGTTTCTAGTTGTGCTACCATTACAGAGGAAGCTGTTGCAACACCACCTGCTGGTGACTCAAAGATTATTTTACTAACTGCCAAAACATATGATTCTCAGGCTGCTGCTGTTGAGGATGATGATGATGATATTGATCTATTTGGTGAAGAAACTGAAGAGGAGAAGAAGGTTGCTGAAGAAAGAGCTGCTGCTGCTAAGTCATCGGCAAAGAAGAAAGAGTCTGGCAAGTCATCAGTTTTGTTGGATGTGAAGCCATGGGATGATGAGACTGACATGAAAAAACTTGAAGAAGCAGTGAGAGGTGTTGAAATGGAAGGATTGCTTTGGGGGGCATCCAAGCTCATGCCTGTTGGATATGGTATCAAGAAATTGCAGATAATGATGACTATTGTGGATGACCTGGTGTCTGTTGACAATCTTATCGAGGAGCATCTCACAGTCGAGCCAATCAACGAGTATGTTCAGAGCTGTGACATTGTGGCATTCAACAAAATCTGTAAGTTCTTCTTTGTACTTTTTCTCTCAAACAAGAAGCATCAGCATGATATAATTGCATTTACGATCTTGTGA | 804 | 43.16 | MAVVFHDLSSASGLKKLDEYLLPRSYITGYQASKDDITVHAALQGAPSAEFVNLSRWYNHIEALLRISGVSGEGSGVIVSSCATITEEAVATPPAGDSKIILLTAKTYDSQAAAVEDDDDDIDLFGEETEEEKKVAEERAAAAKSSAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVEMEGLLWGASKLMPVGYGIKKLQIMMTIVDDLVSVDNLIEEHLTVEPINEYVQSCDIVAFNKICKFFFVLFLSNKKHQHDIIAFTIL | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 21187580 | 21189518 | - | Bma017721.1 | Bma03g01258 | 79931 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01258 | 267 | Pfam | EF-1 guanine nucleotide exchange domain | 156 | 243 | IPR014038 | GO:0003746|GO:0006414 | |
Bma03g01258 | 267 | SUPERFAMILY | eEF-1beta-like | 151 | 243 | IPR036219 | - | |
Bma03g01258 | 267 | Gene3D | - | 147 | 243 | IPR014717 | - | |
Bma03g01258 | 267 | Gene3D | - | 5 | 75 | - | - | |
Bma03g01258 | 267 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 1 | 249 | - | - | |
Bma03g01258 | 267 | PANTHER | RIPENING REGULATED PROTEIN DDTFR10-LIKE | 1 | 249 | - | - | |
Bma03g01258 | 267 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 232 | 243 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bma03g01258 | 267 | Coils | Coil | 126 | 146 | - | - | |
Bma03g01258 | 267 | CDD | EF1B | 157 | 243 | IPR014038 | GO:0003746|GO:0006414 | |
Bma03g01258 | 267 | SMART | EF1_GNE_2 | 154 | 243 | IPR014038 | GO:0003746|GO:0006414 | |
Bma03g01258 | 267 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 118 | 126 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bma03g01258 | 267 | SUPERFAMILY | GST C-terminal domain-like | 11 | 68 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01258 | Bma-Chr3:21187580 | Bma14g00801 | Bma-Chr14:8956557 | 9.40E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01258 | K03232 | - | mnt:21388962 | 336.65 |