Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01302 ATGAGGAAGAGGGAGAGGGAGAATCCTTGCGGGGTTTGTGGCCATTATCACAAATACGAGGAAGGGGAAGTCTGCGGGATTTGTGGCCACCGCGTTCCGGTATCGTCGGAGAAAACGTCGATGCAAATAAGTGCCTTTCCGTCGGAGATCTTATCTGAATTTCTTTATTTGGGTAGCTATGACAACGCTTCGAGGCCCGAACTTCTCAAAACTCAAGGAATCTCCCGCGTTCTGAATAGTGTACCTGCTTGTCAAAATCTCTACAGGAATTCATTCATTTATCACTGCCTCGAATACGATAAATCTCTACCATTCGATGATGCAATTCAGTTTCTAGGTCTTTTAGGTCTTTTGAAAGTGTGGTCGAATAACATTCCTAGTGTATTCAACATTCTTAGTAATTATGCAGAGCAATGTGAAAGGGACAAAGCACGGGTTCTGGTACACTGCATGTCGGGGAAAAATAGGTCCCCGGCTATTGTAATAGCTTACTTGATGAAGAGCAAAGGGTGGAGACTCCAACAGAGCTATCTGTGGGTGAAAGAGCGGAGACCGTCTGTCGATATCACTGAAGCTGTGCATCAACAGTTGCAGGAGTTCGAGAAGAAAGCCTTTGGATCGGCCGACACGAACAAATCTAACATGCCGGTATTCCCTCCTGCAGTCTCCGGCACAACTTTTAGTTTCGGCTTCCCAAAAGTCAACGATCCAATTCCCGTTCCTGCTTTCAATACTGCTGGTGGGACGTCCATTTTTTCCCGTTCGACTTCAGACATCCCTCGCGAGTTTAAGTTCGGAGCCAGTCAACAAAACCCCAGTGGAAGCGATGTGCCGATGGATAGCTCTTAA 849 46.64 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPVSSEKTSMQISAFPSEILSEFLYLGSYDNASRPELLKTQGISRVLNSVPACQNLYRNSFIYHCLEYDKSLPFDDAIQFLGLLGLLKVWSNNIPSVFNILSNYAEQCERDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLQQSYLWVKERRPSVDITEAVHQQLQEFEKKAFGSADTNKSNMPVFPPAVSGTTFSFGFPKVNDPIPVPAFNTAGGTSIFSRSTSDIPREFKFGASQQNPSGSDVPMDSS 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25499425 25501689 - Bma017798.1 Bma03g01302 79975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01302 282 Pfam Dual specificity phosphatase, catalytic domain 55 202 IPR000340 GO:0008138|GO:0016311
Bma03g01302 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Bma03g01302 282 Gene3D Protein tyrosine phosphatase superfamily 40 214 IPR029021 -
Bma03g01302 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 205 IPR029021 -
Bma03g01302 282 SMART dsp_5 46 203 IPR020422 GO:0006470|GO:0008138
Bma03g01302 282 MobiDBLite consensus disorder prediction 262 282 - -
Bma03g01302 282 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 282 - -
Bma03g01302 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 126 195 IPR000387 GO:0016311|GO:0016791
Bma03g01302 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 206 IPR020422 GO:0006470|GO:0008138
Bma03g01302 282 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 282 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01302 Bma-Chr3:25499425 Bma04g01172 Bma-Chr4:30285245 1.10E-12 dispersed
Bma03g01302 Bma-Chr3:25499425 Bma03g00116 Bma-Chr3:909104 6.12E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01302 K04459 - zju:107417407 409.068