Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01308 | ATGAAACTTGAACAACAAGATGAACAGATCAAACAGATGTGCCGGAGTGACGAAGTCGATGCGGGTGACCTTGACCATCGTCTGAGTCTTTTATCAGAGGTTCGGCTTCCTGCAACCCCCGGCAACGACTCCGATGGAGATGGGGATGCCCTCTTCATTCCTCCTCTCAACTTCTCGGCTGTCGACGCCGGCATTTTTCGCTCCGGCTTCCCTCATGACGCCGACTTCTCCTTCATTCAAAGCCTAGGCCTCCGCTCCATCATATACCTTTGTCCGGAGCCTTATCCTGATTCAAATATGGAGTTTCTCAAGTCTAATGGAATCAAATTGTATCAATTCGGCATTGAAGGACATAAGGAGCCATTTGTAAACATCCCAGAGAATAAAATTCGTGAAGCACTGAGAGTTGTTCTTGATGCAAGGAATCACCCGCTTCTAATTCACTGTAAACGAGGAAAGCATCGAACTGGTTGTTTGGTGGGATGCCTGAGGAAAATGCAGAGATGGTGCTTATCGTCTGTATTTTCTGAGTACCAGCGATTTGCAGCGGCTAAAGCTAGAGTTTCTGATCAGAGGTTCATTGAAGTTTTTGATGTTTCTGCCTTAAACCATCTTCCCACGACTCTTTCTAGCTTTCTACGTTAA | 645 | 46.2 | MKLEQQDEQIKQMCRSDEVDAGDLDHRLSLLSEVRLPATPGNDSDGDGDALFIPPLNFSAVDAGIFRSGFPHDADFSFIQSLGLRSIIYLCPEPYPDSNMEFLKSNGIKLYQFGIEGHKEPFVNIPENKIREALRVVLDARNHPLLIHCKRGKHRTGCLVGCLRKMQRWCLSSVFSEYQRFAAAKARVSDQRFIEVFDVSALNHLPTTLSSFLR | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 25800582 | 25802173 | + | Bma017811.1 | Bma03g01308 | 79981 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01308 | 214 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 147 | 157 | IPR016130 | GO:0016311|GO:0016791 | |
Bma03g01308 | 214 | CDD | PFA-DSP_Siw14 | 51 | 198 | - | - | |
Bma03g01308 | 214 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 53 | 198 | IPR029021 | - | |
Bma03g01308 | 214 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 57 | 211 | IPR020422 | GO:0006470|GO:0008138 | |
Bma03g01308 | 214 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 36 | 210 | - | - | |
Bma03g01308 | 214 | Gene3D | Protein tyrosine phosphatase superfamily | 51 | 201 | IPR029021 | - | |
Bma03g01308 | 214 | PANTHER | - | 36 | 210 | - | - | |
Bma03g01308 | 214 | PRINTS | Plant and fungal dual specificity phosphatase signature | 52 | 69 | IPR020428 | GO:0016791 | |
Bma03g01308 | 214 | PRINTS | Plant and fungal dual specificity phosphatase signature | 108 | 122 | IPR020428 | GO:0016791 | |
Bma03g01308 | 214 | PRINTS | Plant and fungal dual specificity phosphatase signature | 89 | 102 | IPR020428 | GO:0016791 | |
Bma03g01308 | 214 | PRINTS | Plant and fungal dual specificity phosphatase signature | 125 | 139 | IPR020428 | GO:0016791 | |
Bma03g01308 | 214 | Pfam | Tyrosine phosphatase family | 53 | 203 | IPR004861 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g01308 | Bma08g00533 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00600 | Bma-Chr2:13616873 | Bma03g01308 | Bma-Chr3:25800582 | 1.21E-72 | dispersed | |
Bma03g01308 | Bma-Chr3:25800582 | Bma08g00533 | Bma-Chr8:31164361 | 1.10E-78 | dispersed | |
Bma03g01308 | Bma-Chr3:25800582 | Bma02g01405 | Bma-Chr2:56279284 | 1.03E-105 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01308 | K18045 | - | ming:122069668 | 303.523 |