Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01308 ATGAAACTTGAACAACAAGATGAACAGATCAAACAGATGTGCCGGAGTGACGAAGTCGATGCGGGTGACCTTGACCATCGTCTGAGTCTTTTATCAGAGGTTCGGCTTCCTGCAACCCCCGGCAACGACTCCGATGGAGATGGGGATGCCCTCTTCATTCCTCCTCTCAACTTCTCGGCTGTCGACGCCGGCATTTTTCGCTCCGGCTTCCCTCATGACGCCGACTTCTCCTTCATTCAAAGCCTAGGCCTCCGCTCCATCATATACCTTTGTCCGGAGCCTTATCCTGATTCAAATATGGAGTTTCTCAAGTCTAATGGAATCAAATTGTATCAATTCGGCATTGAAGGACATAAGGAGCCATTTGTAAACATCCCAGAGAATAAAATTCGTGAAGCACTGAGAGTTGTTCTTGATGCAAGGAATCACCCGCTTCTAATTCACTGTAAACGAGGAAAGCATCGAACTGGTTGTTTGGTGGGATGCCTGAGGAAAATGCAGAGATGGTGCTTATCGTCTGTATTTTCTGAGTACCAGCGATTTGCAGCGGCTAAAGCTAGAGTTTCTGATCAGAGGTTCATTGAAGTTTTTGATGTTTCTGCCTTAAACCATCTTCCCACGACTCTTTCTAGCTTTCTACGTTAA 645 46.2 MKLEQQDEQIKQMCRSDEVDAGDLDHRLSLLSEVRLPATPGNDSDGDGDALFIPPLNFSAVDAGIFRSGFPHDADFSFIQSLGLRSIIYLCPEPYPDSNMEFLKSNGIKLYQFGIEGHKEPFVNIPENKIREALRVVLDARNHPLLIHCKRGKHRTGCLVGCLRKMQRWCLSSVFSEYQRFAAAKARVSDQRFIEVFDVSALNHLPTTLSSFLR 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25800582 25802173 + Bma017811.1 Bma03g01308 79981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01308 214 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Bma03g01308 214 CDD PFA-DSP_Siw14 51 198 - -
Bma03g01308 214 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 198 IPR029021 -
Bma03g01308 214 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 211 IPR020422 GO:0006470|GO:0008138
Bma03g01308 214 PANTHER TYROSINE-PROTEIN PHOSPHATASE 36 210 - -
Bma03g01308 214 Gene3D Protein tyrosine phosphatase superfamily 51 201 IPR029021 -
Bma03g01308 214 PANTHER - 36 210 - -
Bma03g01308 214 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Bma03g01308 214 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Bma03g01308 214 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Bma03g01308 214 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Bma03g01308 214 Pfam Tyrosine phosphatase family 53 203 IPR004861 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01308 Bma08g00533 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00600 Bma-Chr2:13616873 Bma03g01308 Bma-Chr3:25800582 1.21E-72 dispersed
Bma03g01308 Bma-Chr3:25800582 Bma08g00533 Bma-Chr8:31164361 1.10E-78 dispersed
Bma03g01308 Bma-Chr3:25800582 Bma02g01405 Bma-Chr2:56279284 1.03E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01308 K18045 - ming:122069668 303.523