Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01325 ATGTATTTGAATCTCGCTGTGGTTTTTTCTTCACAGAGTTCCTCGGAGGCAGAGTTTTTCTCTGAATATGGTGATGCTAATAGGTACAAAATTCAAGAAGTCATTGGAAAAGGAAGTTATGGAGTAGTATGTTCAGCAGTTGACACTCACACAGGCCAAAAAGTGGCAATAAAGAAGATACACGACATTTTCGAACACATATCGGATGCTGCTCGTATTCTTCGCGAGATAAAACTGCTGAGACTCCTGCGGCACCCTGATATTGTCGAAATCAAACATGTTATGTTGCCACCTTCTCGAAGGGACTTCAATGATATTTATGTTGTTTTTGAGCTGATGGAATCAGACCTTCATCAAGTCATTAAAGCGAACGATGATTTGACCAGAGAACACTATCAGTTTTTTCTTTATCAGTTGCTCCGAGCATTGAAATATATCCACACAGCAAATGTCTACCATAGAGATCTGAAGCCCAAGAATATACTGGCGAATGCTAATTGCAAACTTAAAATCTGTGACTTTGGGTTGGCTAGAGTTTCATTCAATGACACACCGACAACTATATTTTGGACAGATTATGTCGCTACTAGATGGTATAGAGCTCCGGAGCTATGTGGGTCCTTTTTCTCGAAGTATACAACTGCCATTGATATATGGAGCATTGGATGCATATTCGCTGAAGTATTGACAGGCAAACCACTTTTTCCTGGCAAAAATGTTGTTCACCAACTTGATTTAATGACCGATCTTCTCGGAACACCTTTACTAGATACCATTTCTCGGGTAAGAAATGAAAAGGCTAGGAGGTACTTAACCAGCATGAGGAAGAAGCAGCCTGTACCTTTTGCTCAAAAATTTCCAAATGCAGATCCTCTAGCTCTGCGGTTACTGGAGAGATTACTTGCTTTTGATCCAAAAGACAGGCCGACCGCCGAAGAGGCTCTCGCAGATCCGTATTTTAAAGGGTTGGCGAAAATTGAGCGGGAGCCTTCCTGCCAGCCAATTACAAAGATGGAGTTTGAGTTCGAGAGGAGAAGGGTGACAAAGGAAGACATACGAGAGTTAATATTCCGCGAGATATTAGAGTACCATCCTCAACTGCTGAAAGACTACGTGAATGGACCTCCCGCATACTGCTATCACAAATCTAGCCCGGCACATCAGCAAAGAAGTGGATCAGAGGCAGATCAAGGCTCATATTCTGAACCCAATCAAGCAACACATACAACTATCCCGTCCAAAATGATGCCAGATATGGCCATCGACTCCAACCACTTTTTCATGACCCGTGTAGGCGCAAAATCCGAGCACGAAAACAACGCAAACTTTTTACAGGCCAAGGCTCAGTTCGATAGCATAAATGCAGCAGCAGCAGCTGCGTCAATGGCTGCCCACAGGAAGGCCGCGACGGTTCACTTTGGTTTGACAAGGCTGCATTAG 1440 43.47 MYLNLAVVFSSQSSSEAEFFSEYGDANRYKIQEVIGKGSYGVVCSAVDTHTGQKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFNDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVSFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTTAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPLLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIRELIFREILEYHPQLLKDYVNGPPAYCYHKSSPAHQQRSGSEADQGSYSEPNQATHTTIPSKMMPDMAIDSNHFFMTRVGAKSEHENNANFLQAKAQFDSINAAAAAASMAAHRKAATVHFGLTRLH 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26540777 26543818 + Bma017839.1 Bma03g01325 79998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01325 479 SMART serkin_6 29 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01325 479 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 381 - -
Bma03g01325 479 CDD STKc_TDY_MAPK 28 365 - -
Bma03g01325 479 ProSitePatterns Protein kinases ATP-binding region signature. 35 59 IPR017441 GO:0005524
Bma03g01325 479 Gene3D Phosphorylase Kinase; domain 1 44 366 - -
Bma03g01325 479 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 381 - -
Bma03g01325 479 Pfam Protein kinase domain 29 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01325 479 Gene3D Transferase(Phosphotransferase) domain 1 115 343 - -
Bma03g01325 479 ProSitePatterns MAP kinase signature. 64 167 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bma03g01325 479 SUPERFAMILY Protein kinase-like (PK-like) 25 324 IPR011009 -
Bma03g01325 479 MobiDBLite consensus disorder prediction 384 412 - -
Bma03g01325 479 ProSiteProfiles Protein kinase domain profile. 29 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01325 479 MobiDBLite consensus disorder prediction 380 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01325 Bma-Chr3:26540777 Bma12g00683 Bma-Chr12:28416798 7.08E-06 dispersed
Bma03g01325 Bma-Chr3:26540777 Bma15g00264 Bma-Chr15:2612270 3.01E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66424 PF00069 Pkinase 1.60E-67 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01325 - - mnt:21404254 694.886