Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma03g01337 | ATGTCCGGCCAAAGCCAGCGTTTGAATGTGGTTCCCACAGTTACAATGCTTGGTGTTATGAAAGCTCGTCTTGTTGGTGCAACAAGAGGCCATGCCCTGCTCAAGAAGAAGAGTGATGCTTTGACTGTGCAGTTCCGTCAGATATTGAAGAAAATCGTTTCAACTAAGGAATCAATGGGCGACATCATGAAGACCTCTTCATTTGCTCTTACTGAAGCAAAATATGTTGCTGGTGAAAACATTAAACACATTGTCCTGGAGAACGTCCAAAATGCTTCTCTCAAAGTTCGATCCAGACAAGAGAACGTAGCAGGTGTAAAACTCCCTAAATTTGAGTATTTTACTGATGGTGAGACCAAGAATGACCGCACAGGTTTGGCTAGAGGTGGACAACAGGTCCAGCTCTGTCGAACTGCATACGTGAAAGCAATTGAGGTTCTAGTTGAGCTTGCGTCACTTCAGACATCATTTCTGACGCTTGATGAGGCTATAAAGACCACAAATCGCAGAGTTAATGCTCTGGAAAATGTTGTTAAGCCAAGATTGGATAATACAATCGGTTACATAAAGGGGGAGCTAGATGAGCTTGAAAGGGAAGATTTCTTCAGACTAAAAAAGATACAGGGTTATAAGAAGAGGGAGATCGAGAGACAGCTTGCAGCTGCCAAGCAATTTGCAGAGGAGCAATTTGCGGAGAAGATATCCTTGCAGAAGGGAATTTCCTTAAACGCGGCTCACAATATATGGTCCTCAGCCATGGAGAAAGACGAGGATATTATTTGGCGGTTAGTTTTCTGTGTAACTGGTATAATTTCGAAGAATTTCTTGGTAGAATAA | 837 | 42.65 | MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGENIKHIVLENVQNASLKVRSRQENVAGVKLPKFEYFTDGETKNDRTGLARGGQQVQLCRTAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLDNTIGYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEEQFAEKISLQKGISLNAAHNIWSSAMEKDEDIIWRLVFCVTGIISKNFLVE | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 27667590 | 27668426 | - | Bma017862.1 | Bma03g01337 | 80010 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma03g01337 | 278 | Gene3D | - | 1 | 198 | - | - | |
| Bma03g01337 | 278 | Pfam | ATP synthase subunit D | 17 | 208 | IPR002699 | GO:0046961 | |
| Bma03g01337 | 278 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT D-RELATED | 1 | 261 | - | - | |
| Bma03g01337 | 278 | PANTHER | V-TYPE ATP SYNTHASE SUBUNIT D | 1 | 261 | IPR002699 | GO:0046961 | |
| Bma03g01337 | 278 | TIGRFAM | V_ATPase_subD: V-type ATPase, D subunit | 9 | 212 | IPR002699 | GO:0046961 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma03g01337 | Bma-Chr3:27667590 | Bma08g00531 | Bma-Chr8:30949722 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma03g01337 | K02149 | - | tcc:18612121 | 470.7 |