Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01341 ATGGATGAACCTTTTCTGTCAAGATCAAGAGCAGAGGAAGAAGAATCTAGTAGAACATCGACGAGAAGAGAAATTCCTCCTGGCTACATCGATATCGGACAGTCGTATCGCCAATCAACTTCGCATCTAATAACCTCCGATGCGATAATCCCAATCCTCGCCTCTCCGAAGTCTCCTTACATCAACGTCCTACCCACTTTTAACAGGAATGGAAAAATCGCCCACCGCTCCTATTCCGCCCCGGCGCTATTCTCTGACATTAAGGAAGCATTCCGAGGTTCTTCGGACCCTAGGCCTGGTTGGAAATTGCCCCCTTTAATTGTCCGGCAAGCTATCGTCGGCCTCATACTATATTTCGCAATCGGCATTGTAGTCTACCTAACTGGTAGCTTCAAAGGGAAAACCACCTTTAAGCCGGTAGATTCCATGTACTTCACTGTCGTCACTCTTTGTACCATTGGCTATGGTGATATTGTTCCAGATTCTACGTTTACTAAAATTTTTACTTGTGTCTTCATACTAGTTGGTTTTGGATTCATTGATATTCTGCTCAACGGCTTGGTCGTTTACATATGCGATCGACAAGAGGCGGTCTTTTTGAGCACGGTTGACGAGAATCGATTCAACGCCATGGTCAGGACCTACATGGTAGATAAGGAGAAGGGAAGAATGAGAATAAGAACAAAGGTGTGTTTGGCAGTGGGTGTTGTGGTCATTTGCATTGCAGTAGGGGCCATCGGTGTGCATTTTCTGGAGACATTGAATTGGGTTGATAGCATTTATCTTTCTATTACTTCTGTATCGACAGTGGGGTATGGAGATTATTCTTTTACTACTTTAGAAGGAAGATGCTTTGCCATTATTTGGCTTCTGGTGAGCACTTTGGCTGTTGCTAGGGCCTTTCTGTATCTCGCTGAGTTCAGAATTGACAAAAGAAACAGAAAAACTGCGACCTGGGTCCTTCAGAAGAAGATTACTATAGGCGATTTAGTAGCTGCCGATATAGACCACAACGGATTCATCAGTAAATCAGAATTTGTTCTTTACAAGCTCAAAGAGATGGGAAAAATAGCAGAGAAAGACATTCTACGTATTGGCAAACAATTTGATTTATTGGACACAAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATAAGTGA 1170 43.08 MDEPFLSRSRAEEEESSRTSTRREIPPGYIDIGQSYRQSTSHLITSDAIIPILASPKSPYINVLPTFNRNGKIAHRSYSAPALFSDIKEAFRGSSDPRPGWKLPPLIVRQAIVGLILYFAIGIVVYLTGSFKGKTTFKPVDSMYFTVVTLCTIGYGDIVPDSTFTKIFTCVFILVGFGFIDILLNGLVVYICDRQEAVFLSTVDENRFNAMVRTYMVDKEKGRMRIRTKVCLAVGVVVICIAVGAIGVHFLETLNWVDSIYLSITSVSTVGYGDYSFTTLEGRCFAIIWLLVSTLAVARAFLYLAEFRIDKRNRKTATWVLQKKITIGDLVAADIDHNGFISKSEFVLYKLKEMGKIAEKDILRIGKQFDLLDTSNCGKITLADLMEDK 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28156926 28158798 + Bma017868.1 Bma03g01341 80014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01341 389 PANTHER OS01G0696100 PROTEIN 53 385 - -
Bma03g01341 389 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 53 385 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma03g01341 389 SUPERFAMILY Voltage-gated potassium channels 105 191 - -
Bma03g01341 389 SUPERFAMILY EF-hand 332 386 IPR011992 -
Bma03g01341 389 Pfam Ion channel 236 306 IPR013099 -
Bma03g01341 389 Pfam Ion channel 115 188 IPR013099 -
Bma03g01341 389 Gene3D - 198 328 - -
Bma03g01341 389 Gene3D - 330 388 - -
Bma03g01341 389 SUPERFAMILY Voltage-gated potassium channels 219 325 - -
Bma03g01341 389 PRINTS Two pore domain K+ channel signature 148 176 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma03g01341 389 PRINTS Two pore domain K+ channel signature 268 277 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma03g01341 389 MobiDBLite consensus disorder prediction 1 21 - -
Bma03g01341 389 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Bma03g01341 389 Gene3D - 107 197 - -
Bma03g01341 389 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01341 Bma-Chr3:28156926 Bma10g01122 Bma-Chr10:35936040 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01341 K05389 - cit:102629027 546.969