Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01344 | ATGGCATCTGGGAATTCTTTGAATTCAGAATTATCAAAGAAGACTTCATTGGGTTTGTCACTATGGGTTTTGATCTGTTTATGTGTTGGTGCATTTATAGTATTAATCCTTTGCTTCCTATCCATATGGGTAATGTTCAGGAGAAAATCTAGAAGAACTGTTGACAAATTTTCTATTTCTCAAATACCAAATGTATCAAAGGATATCAAGGTTGACAAGGTCGGTACTCAGACTGGGCATGGTAACCCTGAAAGCTTATTCCTTTCCATCCATGAAAAATCGGGTGATAAAAGCTCGGAGAAGACGATAGCTCAATTGGGCATGAGAAAATCAAGTGAAACAGATAATATCAGCCAAGGCAGCTCGTTGCAACATTACGAAAGGGGATGCAGTTCACAGTCTGGGGAAGAAGGAAACTCTGGAACCGTTAGGAAACAGCCTTCACAATCTTATGGAGGATATGGATTTGTGCCACCCTCTCCTCTAGTCGGGTTGCCGGAAGTTTCGCATCTTGGGTGGGGCCATTGGTTCACTCTTAGGGATCTAGAATTTGCTACTAATCGTTTTTCTGCAGAGAATGTGCTCGGTGAGGGTGGTTATGGAGTTGTATACAGAGGCAGACTGGTTAATGGAACTGATGTGGCTGTGAAAAAACTTCTTAATAACTGGGGACAGGCAGAGAAGGAATTTAGAGTGGAAGTGGAGGCCATTGGTCATGTTCGCCACAAAAATCTTGTGCGGCTATTAGGTTATTGCATAGAAGGAGTTCATCGGATGCTAGTATATGAATATGTGAACAATGGAAACTTAGAACAATGGCTGCATGGGGCGATGCGGGTCCATGGCTCCCTTACCTGGGAGGCGCGTATGAAGGTGCTTCTTGGTACAGCTAAGGCGCTTGCTTATTTGCATGAAGCGATAGAACCTAAAGTAGTTCACAGAGACATAAAATCAAGCAATATCTTGATTGATGACGAGTTCAATGGCAAAGTTTCTGATTTTGGATTGGCCAAGCTTTTAGGCTCAGGAGAGAGTCACATCACAACTCGGGTGATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAACACAGGATTGTTAAACGAGAAAAGTGACGTCTATAGCTTTGGTGTTCTCCTTATTGAAACAGTGACAGGAAGGGACCCTGTGGATTATGGCCGTCCTGCGAATGAAGTTAATGTTGTAGAGTGGCTTAAGGTGATGGTGGGAACTAGAAGAGCGGAGGAAGCTGTAGATCAAAATCTTGAAGTTAAGCCCACGATAAGAGCGTTAAAACGAGCCCTTCTTGCTGCACTTAGATGTGTTGATCCTGAGTCAGACAAGAGACCGAAAATGAGTCAAGTTGTAAGGATGCTAGAAGCCGATGAATACCCATTCTGCGAGGTGAGATTAATATCTCAACCGAGGCTAATTATCTATTGTTGTTTTACTCGATCTTAA | 1464 | 42.9 | MASGNSLNSELSKKTSLGLSLWVLICLCVGAFIVLILCFLSIWVMFRRKSRRTVDKFSISQIPNVSKDIKVDKVGTQTGHGNPESLFLSIHEKSGDKSSEKTIAQLGMRKSSETDNISQGSSLQHYERGCSSQSGEEGNSGTVRKQPSQSYGGYGFVPPSPLVGLPEVSHLGWGHWFTLRDLEFATNRFSAENVLGEGGYGVVYRGRLVNGTDVAVKKLLNNWGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRVHGSLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNGKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLIETVTGRDPVDYGRPANEVNVVEWLKVMVGTRRAEEAVDQNLEVKPTIRALKRALLAALRCVDPESDKRPKMSQVVRMLEADEYPFCEVRLISQPRLIIYCCFTRS | 487 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28445738 | 28448014 | - | Bma017871.1 | Bma03g01344 | 80017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01344 | 487 | SMART | serkin_6 | 189 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g01344 | 487 | ProSitePatterns | Protein kinases ATP-binding region signature. | 195 | 218 | IPR017441 | GO:0005524 | |
Bma03g01344 | 487 | PANTHER | OS10G0497600 PROTEIN | 3 | 472 | - | - | |
Bma03g01344 | 487 | CDD | STKc_IRAK | 195 | 461 | - | - | |
Bma03g01344 | 487 | Pfam | Protein kinase domain | 191 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g01344 | 487 | MobiDBLite | consensus disorder prediction | 108 | 151 | - | - | |
Bma03g01344 | 487 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 311 | 323 | IPR008271 | GO:0004672|GO:0006468 | |
Bma03g01344 | 487 | PANTHER | OS01G0323000 PROTEIN | 3 | 472 | - | - | |
Bma03g01344 | 487 | Gene3D | Transferase(Phosphotransferase) domain 1 | 265 | 469 | - | - | |
Bma03g01344 | 487 | ProSiteProfiles | Protein kinase domain profile. | 189 | 453 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma03g01344 | 487 | MobiDBLite | consensus disorder prediction | 108 | 149 | - | - | |
Bma03g01344 | 487 | Gene3D | Phosphorylase Kinase; domain 1 | 170 | 264 | - | - | |
Bma03g01344 | 487 | SUPERFAMILY | Protein kinase-like (PK-like) | 173 | 471 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01344 | Bma-Chr3:28445738 | Bma05g00240 | Bma-Chr5:6529823 | 0 | dispersed | |
Bma03g01344 | Bma-Chr3:28445738 | Bma15g00184 | Bma-Chr15:1925429 | 9.11E-93 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66425 | PF00069 | Pkinase | 5.90E-47 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01344 | - | - | zju:107416135 | 788.104 |