Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01344 ATGGCATCTGGGAATTCTTTGAATTCAGAATTATCAAAGAAGACTTCATTGGGTTTGTCACTATGGGTTTTGATCTGTTTATGTGTTGGTGCATTTATAGTATTAATCCTTTGCTTCCTATCCATATGGGTAATGTTCAGGAGAAAATCTAGAAGAACTGTTGACAAATTTTCTATTTCTCAAATACCAAATGTATCAAAGGATATCAAGGTTGACAAGGTCGGTACTCAGACTGGGCATGGTAACCCTGAAAGCTTATTCCTTTCCATCCATGAAAAATCGGGTGATAAAAGCTCGGAGAAGACGATAGCTCAATTGGGCATGAGAAAATCAAGTGAAACAGATAATATCAGCCAAGGCAGCTCGTTGCAACATTACGAAAGGGGATGCAGTTCACAGTCTGGGGAAGAAGGAAACTCTGGAACCGTTAGGAAACAGCCTTCACAATCTTATGGAGGATATGGATTTGTGCCACCCTCTCCTCTAGTCGGGTTGCCGGAAGTTTCGCATCTTGGGTGGGGCCATTGGTTCACTCTTAGGGATCTAGAATTTGCTACTAATCGTTTTTCTGCAGAGAATGTGCTCGGTGAGGGTGGTTATGGAGTTGTATACAGAGGCAGACTGGTTAATGGAACTGATGTGGCTGTGAAAAAACTTCTTAATAACTGGGGACAGGCAGAGAAGGAATTTAGAGTGGAAGTGGAGGCCATTGGTCATGTTCGCCACAAAAATCTTGTGCGGCTATTAGGTTATTGCATAGAAGGAGTTCATCGGATGCTAGTATATGAATATGTGAACAATGGAAACTTAGAACAATGGCTGCATGGGGCGATGCGGGTCCATGGCTCCCTTACCTGGGAGGCGCGTATGAAGGTGCTTCTTGGTACAGCTAAGGCGCTTGCTTATTTGCATGAAGCGATAGAACCTAAAGTAGTTCACAGAGACATAAAATCAAGCAATATCTTGATTGATGACGAGTTCAATGGCAAAGTTTCTGATTTTGGATTGGCCAAGCTTTTAGGCTCAGGAGAGAGTCACATCACAACTCGGGTGATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAACACAGGATTGTTAAACGAGAAAAGTGACGTCTATAGCTTTGGTGTTCTCCTTATTGAAACAGTGACAGGAAGGGACCCTGTGGATTATGGCCGTCCTGCGAATGAAGTTAATGTTGTAGAGTGGCTTAAGGTGATGGTGGGAACTAGAAGAGCGGAGGAAGCTGTAGATCAAAATCTTGAAGTTAAGCCCACGATAAGAGCGTTAAAACGAGCCCTTCTTGCTGCACTTAGATGTGTTGATCCTGAGTCAGACAAGAGACCGAAAATGAGTCAAGTTGTAAGGATGCTAGAAGCCGATGAATACCCATTCTGCGAGGTGAGATTAATATCTCAACCGAGGCTAATTATCTATTGTTGTTTTACTCGATCTTAA 1464 42.9 MASGNSLNSELSKKTSLGLSLWVLICLCVGAFIVLILCFLSIWVMFRRKSRRTVDKFSISQIPNVSKDIKVDKVGTQTGHGNPESLFLSIHEKSGDKSSEKTIAQLGMRKSSETDNISQGSSLQHYERGCSSQSGEEGNSGTVRKQPSQSYGGYGFVPPSPLVGLPEVSHLGWGHWFTLRDLEFATNRFSAENVLGEGGYGVVYRGRLVNGTDVAVKKLLNNWGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRVHGSLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNGKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLIETVTGRDPVDYGRPANEVNVVEWLKVMVGTRRAEEAVDQNLEVKPTIRALKRALLAALRCVDPESDKRPKMSQVVRMLEADEYPFCEVRLISQPRLIIYCCFTRS 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28445738 28448014 - Bma017871.1 Bma03g01344 80017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01344 487 SMART serkin_6 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01344 487 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Bma03g01344 487 PANTHER OS10G0497600 PROTEIN 3 472 - -
Bma03g01344 487 CDD STKc_IRAK 195 461 - -
Bma03g01344 487 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01344 487 MobiDBLite consensus disorder prediction 108 151 - -
Bma03g01344 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Bma03g01344 487 PANTHER OS01G0323000 PROTEIN 3 472 - -
Bma03g01344 487 Gene3D Transferase(Phosphotransferase) domain 1 265 469 - -
Bma03g01344 487 ProSiteProfiles Protein kinase domain profile. 189 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01344 487 MobiDBLite consensus disorder prediction 108 149 - -
Bma03g01344 487 Gene3D Phosphorylase Kinase; domain 1 170 264 - -
Bma03g01344 487 SUPERFAMILY Protein kinase-like (PK-like) 173 471 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01344 Bma-Chr3:28445738 Bma05g00240 Bma-Chr5:6529823 0 dispersed
Bma03g01344 Bma-Chr3:28445738 Bma15g00184 Bma-Chr15:1925429 9.11E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66425 PF00069 Pkinase 5.90E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01344 - - zju:107416135 788.104