Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01356 | ATGGACGCAAAACCAGACGATACTTCAGCATCATCTCAGGCAAACACTTCTGCTGTTACACCCTCTGAAGTACAACATAATATTGCAGTCACTGCTGAATCTGAGAATTTGAAACGTGATGTGCCATCTAGACTATCTTCTACTGGCATATCTTCTTGGGCTAAGAGTTTGAAGATTACACAGCCTTTGATTGGATCACAAGATGGTTCACCAACTGCTCAGGCAGGCAAATCAAGTTTTTCACGTTTCACCAGTGGCTTTGGATTGCAGTTGTCTCCAAAAGATCCTTCTCCAAAAGATGCCTCTGACAGCACTTTAAAATCTCAGGAACCTGGTTTATTCGGGACACTTACAAAAGGTTTAGTTGATTCTTCTAGAAGTGCTGTGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACATATATCACAGAAAACATAATTGCTATGGGATTCCCGGCTGGCGATATGAGTTCAGGCTTTTTTGGTTATGTTGAGGGTTTCTATCGGAACCACATGGAAGAAGTTCTTAAATTCTTTGAAACTCATCATAAGGACAAGTACAAAGTGTACAATCTTTGTTCTGAGAGGCTGTACGATGCTTCATTGTTTGAAGGAAAGGTGGCTAGTTTTCCTTTTGATGACCATAATTGCCCCCCAGCTCGATTGATAATATCATTTTGTCAAAGTGCTTACTCGTGGCTGAAAGAAGATATTGAAAATGTAGTGGTTGTGCATTGCAAAGCAGGAATGGCTAGAACAGGTTTGATGATATCTAGTCTTCTTCTATACCTGAAGTTTTTTCCAACTGCCGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTTGATGGCAAAGGCCTTATCCTACCTAGTCAGATTAGGTATGTCAAGTATTTTGAGCGCATATTAACATACTTCAATGGTGAAAATCCACCTGGCCGCAGGTGCCTGCTTAGAGGATTTCGGCTTCATAGATGTCCGCATTGGACCAGGCCGTCTATAACTGTGTCTGATCATAATGGTGTTCTTTTCTCCTCCAAAAAACATCCAAGAACCAAAGATATCTCTCCAGAAGACTTTTGGTTTAGTGCACCAAAGAAGGGGGTGATGGTTTTTGCTTTACCTGGGGAGCCTGGTCTAACGGAGTTGGTGGGGGACTTTAAGATCCACTTCCATGACCGCCAAGGAGATTTTTACTGTTGGCTAAACACAACTATGATTGAAAATCGCAAAATTCTGGACACTAATGATCTTGATGGGTTTGACAAGAGGAAACTGCCTTCCCCAGGATTTCAGGTCGAGGTTGTTTTAGTGGATTATGATGGTAACATTCCTACGTCACCGGATACCGCAAATAATACAAAGAAGTCAGATGAAAGATCAAGTTCGACTCCTGCTCCACTCGATGGGGGTTCAGCTCCTCCGAAACCTACAGAAAATCCCATAAATGAAGATAAATACGATGCATCTTCAGGCTTGGCAGCAGATGAGGGTGGTTCTTCAAAGGGCGAGCAAGGTGTTTCTTCTGGTTCAGTGATTGAACCTGGAAGTGCCACCTCTAATTCTACGGGTAAGGCTGAAGATGAAGTTAGGAATTTAACACAGGCAACGGAAGAAGTTTCTTTAGTAGACAGTATCCCAAAACGAATCGCAACCTCTGGGGAGCCCAAAAATGATGCTGGGACAGAAGTTTCAACCCCCGAAAGTGAGTTCAAGGCAATGGCTGCTGATGCTTCTGTCTTTACCTTTGGCGACGAGGACGATTACGAGACTGATTGA | 1833 | 42.94 | MDAKPDDTSASSQANTSAVTPSEVQHNIAVTAESENLKRDVPSRLSSTGISSWAKSLKITQPLIGSQDGSPTAQAGKSSFSRFTSGFGLQLSPKDPSPKDASDSTLKSQEPGLFGTLTKGLVDSSRSAVKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVLKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPARLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGKGLILPSQIRYVKYFERILTYFNGENPPGRRCLLRGFRLHRCPHWTRPSITVSDHNGVLFSSKKHPRTKDISPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMIENRKILDTNDLDGFDKRKLPSPGFQVEVVLVDYDGNIPTSPDTANNTKKSDERSSSTPAPLDGGSAPPKPTENPINEDKYDASSGLAADEGGSSKGEQGVSSGSVIEPGSATSNSTGKAEDEVRNLTQATEEVSLVDSIPKRIATSGEPKNDAGTEVSTPESEFKAMAADASVFTFGDEDDYETD | 610 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 29597487 | 29603603 | + | Bma017898.1 | Bma03g01356 | 80029 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 460 | 610 | - | - | |
Bma03g01356 | 610 | Pfam | C2 domain of PTEN tumour-suppressor protein | 332 | 455 | IPR014020 | - | |
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 87 | 112 | - | - | |
Bma03g01356 | 610 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 14 | 610 | - | - | |
Bma03g01356 | 610 | Gene3D | Protein tyrosine phosphatase superfamily | 130 | 327 | IPR029021 | - | |
Bma03g01356 | 610 | Gene3D | - | 333 | 458 | - | - | |
Bma03g01356 | 610 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A | 14 | 610 | - | - | |
Bma03g01356 | 610 | SMART | PTEN_C2_2 | 329 | 457 | IPR014020 | - | |
Bma03g01356 | 610 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 158 | 325 | IPR029021 | - | |
Bma03g01356 | 610 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 401 | 455 | IPR035892 | - | |
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 463 | 486 | - | - | |
Bma03g01356 | 610 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 261 | 271 | IPR016130 | GO:0016311|GO:0016791 | |
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bma03g01356 | 610 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 145 | 324 | IPR029023 | - | |
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Bma03g01356 | 610 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 238 | 298 | IPR000387 | GO:0016311|GO:0016791 | |
Bma03g01356 | 610 | ProSiteProfiles | C2 tensin-type domain profile. | 331 | 458 | IPR014020 | - | |
Bma03g01356 | 610 | MobiDBLite | consensus disorder prediction | 520 | 559 | - | - | |
Bma03g01356 | 610 | CDD | PTP_PTEN | 155 | 320 | IPR045101 | GO:0016791 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g01356 | Bma08g00514 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00437 | Bma-Chr2:6538711 | Bma03g01356 | Bma-Chr3:29597487 | 2.66E-46 | transposed | |
Bma15g00872 | Bma-Chr15:25723058 | Bma03g01356 | Bma-Chr3:29597487 | 0 | transposed | |
Bma03g01356 | Bma-Chr3:29597487 | Bma08g00514 | Bma-Chr8:27821531 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01356 | K01110 | - | mnt:21410065 | 883.248 |