Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01356 ATGGACGCAAAACCAGACGATACTTCAGCATCATCTCAGGCAAACACTTCTGCTGTTACACCCTCTGAAGTACAACATAATATTGCAGTCACTGCTGAATCTGAGAATTTGAAACGTGATGTGCCATCTAGACTATCTTCTACTGGCATATCTTCTTGGGCTAAGAGTTTGAAGATTACACAGCCTTTGATTGGATCACAAGATGGTTCACCAACTGCTCAGGCAGGCAAATCAAGTTTTTCACGTTTCACCAGTGGCTTTGGATTGCAGTTGTCTCCAAAAGATCCTTCTCCAAAAGATGCCTCTGACAGCACTTTAAAATCTCAGGAACCTGGTTTATTCGGGACACTTACAAAAGGTTTAGTTGATTCTTCTAGAAGTGCTGTGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACATATATCACAGAAAACATAATTGCTATGGGATTCCCGGCTGGCGATATGAGTTCAGGCTTTTTTGGTTATGTTGAGGGTTTCTATCGGAACCACATGGAAGAAGTTCTTAAATTCTTTGAAACTCATCATAAGGACAAGTACAAAGTGTACAATCTTTGTTCTGAGAGGCTGTACGATGCTTCATTGTTTGAAGGAAAGGTGGCTAGTTTTCCTTTTGATGACCATAATTGCCCCCCAGCTCGATTGATAATATCATTTTGTCAAAGTGCTTACTCGTGGCTGAAAGAAGATATTGAAAATGTAGTGGTTGTGCATTGCAAAGCAGGAATGGCTAGAACAGGTTTGATGATATCTAGTCTTCTTCTATACCTGAAGTTTTTTCCAACTGCCGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTTGATGGCAAAGGCCTTATCCTACCTAGTCAGATTAGGTATGTCAAGTATTTTGAGCGCATATTAACATACTTCAATGGTGAAAATCCACCTGGCCGCAGGTGCCTGCTTAGAGGATTTCGGCTTCATAGATGTCCGCATTGGACCAGGCCGTCTATAACTGTGTCTGATCATAATGGTGTTCTTTTCTCCTCCAAAAAACATCCAAGAACCAAAGATATCTCTCCAGAAGACTTTTGGTTTAGTGCACCAAAGAAGGGGGTGATGGTTTTTGCTTTACCTGGGGAGCCTGGTCTAACGGAGTTGGTGGGGGACTTTAAGATCCACTTCCATGACCGCCAAGGAGATTTTTACTGTTGGCTAAACACAACTATGATTGAAAATCGCAAAATTCTGGACACTAATGATCTTGATGGGTTTGACAAGAGGAAACTGCCTTCCCCAGGATTTCAGGTCGAGGTTGTTTTAGTGGATTATGATGGTAACATTCCTACGTCACCGGATACCGCAAATAATACAAAGAAGTCAGATGAAAGATCAAGTTCGACTCCTGCTCCACTCGATGGGGGTTCAGCTCCTCCGAAACCTACAGAAAATCCCATAAATGAAGATAAATACGATGCATCTTCAGGCTTGGCAGCAGATGAGGGTGGTTCTTCAAAGGGCGAGCAAGGTGTTTCTTCTGGTTCAGTGATTGAACCTGGAAGTGCCACCTCTAATTCTACGGGTAAGGCTGAAGATGAAGTTAGGAATTTAACACAGGCAACGGAAGAAGTTTCTTTAGTAGACAGTATCCCAAAACGAATCGCAACCTCTGGGGAGCCCAAAAATGATGCTGGGACAGAAGTTTCAACCCCCGAAAGTGAGTTCAAGGCAATGGCTGCTGATGCTTCTGTCTTTACCTTTGGCGACGAGGACGATTACGAGACTGATTGA 1833 42.94 MDAKPDDTSASSQANTSAVTPSEVQHNIAVTAESENLKRDVPSRLSSTGISSWAKSLKITQPLIGSQDGSPTAQAGKSSFSRFTSGFGLQLSPKDPSPKDASDSTLKSQEPGLFGTLTKGLVDSSRSAVKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVLKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPARLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGKGLILPSQIRYVKYFERILTYFNGENPPGRRCLLRGFRLHRCPHWTRPSITVSDHNGVLFSSKKHPRTKDISPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMIENRKILDTNDLDGFDKRKLPSPGFQVEVVLVDYDGNIPTSPDTANNTKKSDERSSSTPAPLDGGSAPPKPTENPINEDKYDASSGLAADEGGSSKGEQGVSSGSVIEPGSATSNSTGKAEDEVRNLTQATEEVSLVDSIPKRIATSGEPKNDAGTEVSTPESEFKAMAADASVFTFGDEDDYETD 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29597487 29603603 + Bma017898.1 Bma03g01356 80029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01356 610 MobiDBLite consensus disorder prediction 460 610 - -
Bma03g01356 610 Pfam C2 domain of PTEN tumour-suppressor protein 332 455 IPR014020 -
Bma03g01356 610 MobiDBLite consensus disorder prediction 87 112 - -
Bma03g01356 610 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 14 610 - -
Bma03g01356 610 Gene3D Protein tyrosine phosphatase superfamily 130 327 IPR029021 -
Bma03g01356 610 Gene3D - 333 458 - -
Bma03g01356 610 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 14 610 - -
Bma03g01356 610 SMART PTEN_C2_2 329 457 IPR014020 -
Bma03g01356 610 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 158 325 IPR029021 -
Bma03g01356 610 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 401 455 IPR035892 -
Bma03g01356 610 MobiDBLite consensus disorder prediction 463 486 - -
Bma03g01356 610 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311|GO:0016791
Bma03g01356 610 MobiDBLite consensus disorder prediction 1 32 - -
Bma03g01356 610 ProSiteProfiles Phosphatase tensin-type domain profile. 145 324 IPR029023 -
Bma03g01356 610 MobiDBLite consensus disorder prediction 1 49 - -
Bma03g01356 610 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 238 298 IPR000387 GO:0016311|GO:0016791
Bma03g01356 610 ProSiteProfiles C2 tensin-type domain profile. 331 458 IPR014020 -
Bma03g01356 610 MobiDBLite consensus disorder prediction 520 559 - -
Bma03g01356 610 CDD PTP_PTEN 155 320 IPR045101 GO:0016791
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01356 Bma08g00514 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00437 Bma-Chr2:6538711 Bma03g01356 Bma-Chr3:29597487 2.66E-46 transposed
Bma15g00872 Bma-Chr15:25723058 Bma03g01356 Bma-Chr3:29597487 0 transposed
Bma03g01356 Bma-Chr3:29597487 Bma08g00514 Bma-Chr8:27821531 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01356 K01110 - mnt:21410065 883.248