Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01357 | ATGGAACTACGTCCAGACGAGCAGCAGAACCAGGCCTCTTTCTTTTTGCTGGACTCTCTGTACTGTGAGGAAGAAAAATGGGAAGAGGAGGAAACAGTAGAACGAAGTTTTCCGGTGGCCAGTAACGGGGTCTTCTGTAATCTTCTGTTTGAAGAAGGTCCAGCGTTTTGTGAAAATGAAGAGCTTTTATCTCTCTTCTCCAAAGAGGAAGAACAGCTAGACCGAACCCATGTCTGTCTGGAAAGTCTGAAGGCAGATCGCCTGCTCTCTGCAGCTCGCTCTGAGGCTGTACATTGGATTCTGATAGTGAATGCCCATTTCGGATTCACACCTCTCACTGCCATTTTAGCCACTAACTATCTGGAAAGGTTTCTCTCCAGCCTCCATTTTCAGCGAGACAAACCTTGGATGGTTCAGCTGGTGGCTGTCACTTGCCTCTCTTTGGCTGCAAAAGTAGAAGAGATCGAAGTTCCTCTTCTTCTAGACCTCCAAGTGGAAGGAACCAAGTTTGTGTTTGAGGCGAAGACGATTCAGAGAATGGAGCTTCTGCTGCTGTCGAGTCTTCAATGGCGGATGCATCCAGTTACCCCTCTTTCATTTCTTGACCATATCACCAGCAGGCTGGGTTTTAAGAACCACCATCACTGGGAGTTTATCAGACGCTGTGAGAGTCTCACTCTCTCTCTCACCTCAGACTCCAGATTCATCGGTTTTCTTCCATCTGTAATTGCCACTGCAACGATGATGAATGTCATCGAACAGCTCGAACCAAGCAACTCACTGCCATTACAGAACCAGCTACTGAATTTTCTTAACATAACCAGGGACAAGGTGGAAGAGTGTTTTAATCTTATAAAAGAGTTGAAGGTCTTCCCCATCAGTCATCTCAAGCGTAAGGAGAGAGCTCCAAGCAGCCCAAGCGGTGTCGTTGACGGTTTCTTGACCTCTGATAGTTCCAATGATTCGTGGGTATCAGTGTGTTCAGCTTCTTCATCAGTCTATTCATCGCCAGAACCTCCATTGAAGAAGAGTAGAGCTCAAAACCAGCAAATGAGGGTGCCTTCTATACTCAACCGAGTCTTCGTCGACGTTGTTGCAAGCCCTCCTTAG | 1110 | 46.94 | MELRPDEQQNQASFFLLDSLYCEEEKWEEEETVERSFPVASNGVFCNLLFEEGPAFCENEELLSLFSKEEEQLDRTHVCLESLKADRLLSAARSEAVHWILIVNAHFGFTPLTAILATNYLERFLSSLHFQRDKPWMVQLVAVTCLSLAAKVEEIEVPLLLDLQVEGTKFVFEAKTIQRMELLLLSSLQWRMHPVTPLSFLDHITSRLGFKNHHHWEFIRRCESLTLSLTSDSRFIGFLPSVIATATMMNVIEQLEPSNSLPLQNQLLNFLNITRDKVEECFNLIKELKVFPISHLKRKERAPSSPSGVVDGFLTSDSSNDSWVSVCSASSSVYSSPEPPLKKSRAQNQQMRVPSILNRVFVDVVASPP | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 29764426 | 29765751 | + | Bma017901.1 | Bma03g01357 | 80030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01357 | 369 | SMART | Cyclin_C_2 | 195 | 307 | IPR004367 | - | |
Bma03g01357 | 369 | Gene3D | - | 75 | 193 | - | - | |
Bma03g01357 | 369 | MobiDBLite | consensus disorder prediction | 330 | 349 | - | - | |
Bma03g01357 | 369 | SUPERFAMILY | Cyclin-like | 57 | 193 | IPR036915 | - | |
Bma03g01357 | 369 | Pfam | Cyclin, C-terminal domain | 195 | 289 | IPR004367 | - | |
Bma03g01357 | 369 | CDD | CYCLIN | 93 | 185 | IPR013763 | - | |
Bma03g01357 | 369 | SMART | cyclin_7 | 98 | 186 | IPR013763 | - | |
Bma03g01357 | 369 | PANTHER | CYCLINS | 43 | 345 | IPR039361 | - | |
Bma03g01357 | 369 | Pfam | Cyclin, N-terminal domain | 65 | 192 | IPR006671 | - | |
Bma03g01357 | 369 | PANTHER | CYCLIN D3.1 PROTEIN | 43 | 345 | - | - | |
Bma03g01357 | 369 | Gene3D | - | 65 | 283 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g01357 | Bma05g00508 | CCT | |
Bma03g01357 | Bma05g00508 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01124 | Bma-Chr3:14625199 | Bma03g01357 | Bma-Chr3:29764426 | 4.10E-91 | dispersed | |
Bma03g01357 | Bma-Chr3:29764426 | Bma11g00604 | Bma-Chr11:9019130 | 2.96E-94 | dispersed | |
Bma03g01357 | Bma-Chr3:29764426 | Bma03g01358 | Bma-Chr3:30070549 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01357 | K14505 | - | qsu:112038380 | 370.933 |