Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01357 ATGGAACTACGTCCAGACGAGCAGCAGAACCAGGCCTCTTTCTTTTTGCTGGACTCTCTGTACTGTGAGGAAGAAAAATGGGAAGAGGAGGAAACAGTAGAACGAAGTTTTCCGGTGGCCAGTAACGGGGTCTTCTGTAATCTTCTGTTTGAAGAAGGTCCAGCGTTTTGTGAAAATGAAGAGCTTTTATCTCTCTTCTCCAAAGAGGAAGAACAGCTAGACCGAACCCATGTCTGTCTGGAAAGTCTGAAGGCAGATCGCCTGCTCTCTGCAGCTCGCTCTGAGGCTGTACATTGGATTCTGATAGTGAATGCCCATTTCGGATTCACACCTCTCACTGCCATTTTAGCCACTAACTATCTGGAAAGGTTTCTCTCCAGCCTCCATTTTCAGCGAGACAAACCTTGGATGGTTCAGCTGGTGGCTGTCACTTGCCTCTCTTTGGCTGCAAAAGTAGAAGAGATCGAAGTTCCTCTTCTTCTAGACCTCCAAGTGGAAGGAACCAAGTTTGTGTTTGAGGCGAAGACGATTCAGAGAATGGAGCTTCTGCTGCTGTCGAGTCTTCAATGGCGGATGCATCCAGTTACCCCTCTTTCATTTCTTGACCATATCACCAGCAGGCTGGGTTTTAAGAACCACCATCACTGGGAGTTTATCAGACGCTGTGAGAGTCTCACTCTCTCTCTCACCTCAGACTCCAGATTCATCGGTTTTCTTCCATCTGTAATTGCCACTGCAACGATGATGAATGTCATCGAACAGCTCGAACCAAGCAACTCACTGCCATTACAGAACCAGCTACTGAATTTTCTTAACATAACCAGGGACAAGGTGGAAGAGTGTTTTAATCTTATAAAAGAGTTGAAGGTCTTCCCCATCAGTCATCTCAAGCGTAAGGAGAGAGCTCCAAGCAGCCCAAGCGGTGTCGTTGACGGTTTCTTGACCTCTGATAGTTCCAATGATTCGTGGGTATCAGTGTGTTCAGCTTCTTCATCAGTCTATTCATCGCCAGAACCTCCATTGAAGAAGAGTAGAGCTCAAAACCAGCAAATGAGGGTGCCTTCTATACTCAACCGAGTCTTCGTCGACGTTGTTGCAAGCCCTCCTTAG 1110 46.94 MELRPDEQQNQASFFLLDSLYCEEEKWEEEETVERSFPVASNGVFCNLLFEEGPAFCENEELLSLFSKEEEQLDRTHVCLESLKADRLLSAARSEAVHWILIVNAHFGFTPLTAILATNYLERFLSSLHFQRDKPWMVQLVAVTCLSLAAKVEEIEVPLLLDLQVEGTKFVFEAKTIQRMELLLLSSLQWRMHPVTPLSFLDHITSRLGFKNHHHWEFIRRCESLTLSLTSDSRFIGFLPSVIATATMMNVIEQLEPSNSLPLQNQLLNFLNITRDKVEECFNLIKELKVFPISHLKRKERAPSSPSGVVDGFLTSDSSNDSWVSVCSASSSVYSSPEPPLKKSRAQNQQMRVPSILNRVFVDVVASPP 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29764426 29765751 + Bma017901.1 Bma03g01357 80030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01357 369 SMART Cyclin_C_2 195 307 IPR004367 -
Bma03g01357 369 Gene3D - 75 193 - -
Bma03g01357 369 MobiDBLite consensus disorder prediction 330 349 - -
Bma03g01357 369 SUPERFAMILY Cyclin-like 57 193 IPR036915 -
Bma03g01357 369 Pfam Cyclin, C-terminal domain 195 289 IPR004367 -
Bma03g01357 369 CDD CYCLIN 93 185 IPR013763 -
Bma03g01357 369 SMART cyclin_7 98 186 IPR013763 -
Bma03g01357 369 PANTHER CYCLINS 43 345 IPR039361 -
Bma03g01357 369 Pfam Cyclin, N-terminal domain 65 192 IPR006671 -
Bma03g01357 369 PANTHER CYCLIN D3.1 PROTEIN 43 345 - -
Bma03g01357 369 Gene3D - 65 283 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01357 Bma05g00508 CCT
Bma03g01357 Bma05g00508 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01124 Bma-Chr3:14625199 Bma03g01357 Bma-Chr3:29764426 4.10E-91 dispersed
Bma03g01357 Bma-Chr3:29764426 Bma11g00604 Bma-Chr11:9019130 2.96E-94 dispersed
Bma03g01357 Bma-Chr3:29764426 Bma03g01358 Bma-Chr3:30070549 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01357 K14505 - qsu:112038380 370.933