Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01363 ATGGGCAGCGTTGAAGCAGAAAGAGCAGTGACAGGACTGGCAGCGAGAGACCCATCTGGAATTCTCTCTCCTTACACTTATACTCTCAGAAACACAGGCCCAGAAGATGTTTACATCAGAGTGATATGTTGTGGAATTTGCCATACAGATCTTCATCAGATGAAAAACGATCTCGGCATGTCCAACTATCCTATGGTTCCAGGGCATGAGGTTGTTGGAGAAGTTATGGAAGTCGGGAAAGACGTCACAAGTTTCAGAGTTGGGGAGATGGTGGGAGTAGGTTGCATCGTAGGTTCTTGCAGAAAATGTATGCCTTGTGACTCGCACAAAGAGCAGTACTGCGCCAAGAAAATCTGGACATATAATGATGTCTACCCAGATGGCAAGCCTACCTACGGCGGTTTTGCAACATCCATGCTCGTCCACCATAAATTTGTGGTTAAAATACCAGAAGGGATGGCACCAGAACAGGCAGCGCCACTACTGTGCGCAGGGGTGACAGTTTACAGCCCACTGAGCCACTTTGGTTTAAAGCAAAGTGGGTTGAGAGGCGGGATACTAGGGCTAGGTGGAGTGGGACACATGGGCGTCAAGATAGCCAAAGCTATGGGCCATCATGTCACTGTAATCAGCTCGTCTGACAAAAAAAGGCAAGAAGCTCTCGGCCATCTTGGCGCAGATGAGTATCTCGTCAGCTCAGATGCAGCAAAAATGAAAGAAGCTTCTGAATCTCTTGATTATATTATTGATACTGTGCCTGTTTTTCATCCTCTCGAGCCTTGTCTTTCTCTGCTCAAAATGGAGGGGAAGTTGATCTTGATGGGCGTCATCACTACCCCTATGCAGTTTGTTTCTCCCATGATCATGCTTGGTCGGAAGTCAATTACAGGGAGTTTCATAGGGAGCATGAAGGAGATTGAAGAGGTGCTTGATCTCTTCAAAGAGAAGAATCTTTCCTCCATGATTGAGGTGGTGAAGTTAGATTACATTAACAAGGCCTTCGAGAGGTTGGAGAAGAACGATGTTAGGTATAGGTTTGTGGTGGATGTTGCTGGAAGCAAGTTTGATGTCTGA 1074 46.46 MGSVEAERAVTGLAARDPSGILSPYTYTLRNTGPEDVYIRVICCGICHTDLHQMKNDLGMSNYPMVPGHEVVGEVMEVGKDVTSFRVGEMVGVGCIVGSCRKCMPCDSHKEQYCAKKIWTYNDVYPDGKPTYGGFATSMLVHHKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRQEALGHLGADEYLVSSDAAKMKEASESLDYIIDTVPVFHPLEPCLSLLKMEGKLILMGVITTPMQFVSPMIMLGRKSITGSFIGSMKEIEEVLDLFKEKNLSSMIEVVKLDYINKAFERLEKNDVRYRFVVDVAGSKFDV 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30918434 30920141 + Bma017911.1 Bma03g01363 80036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01363 357 CDD CAD1 11 349 - -
Bma03g01363 357 Gene3D - 14 350 - -
Bma03g01363 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Bma03g01363 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 355 - -
Bma03g01363 357 Gene3D - 164 320 - -
Bma03g01363 357 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Bma03g01363 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Bma03g01363 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bma03g01363 357 PANTHER ALDEHYDE REDUCTASE 5 355 - -
Bma03g01363 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Bma03g01363 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01363 Bma-Chr3:30918434 Bma06g00655 Bma-Chr6:35204886 1.32E-112 dispersed
Bma03g01363 Bma-Chr3:30918434 Bma03g01039 Bma-Chr3:12141113 3.35E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01363 K00083 - csv:101222395 568.926