Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01409 ATGGATGGTTCTCATCAAAGCCTCACTCGTTTCATTCTGCTGTTGCTTGCGTTTTCTGCTCTCTCTTCCCTGCATGTTGTGCATGGGCAACTCACTATAGTGGGATTCTATTCTAGTACGTGTCCACAACTGGAATCGGTAGTGAGATCGACGGTGGAGGGTCATCTCAGTTCCAACCCAGCCATGGCTCCAGGCTTGCTTCGAATGTTCTTCCACGACTGCTTCGTCCACGGCTGCGACGCTTCCATTCTTATCGCCGGCCCGTCCTCTGAACGAACGGCCCGTCAAAACAGTAATCTCAGAGGCTTTGACGTCATCGACGACGCCAAGACCCAGCTCGAGGCTCTCTGCCCCGGTGTCGTCTCCTGCGCCGACATTCTCGCCATCGCGGCCCGAGACGTTGTTTTTCTGAGCAAAGGACCAAGCTGGGAAGTGCCCACTGGGCGTAGGGATGGGCGGGTGTCTTTGGCTTCTGATGCCGCCGATTTGCCTGGAGCTCGAGATTCCGTTGCAGAACAGGTGAGAAAGTTCACTGAGAAGAATCTGAACACCCTAGACCTCGTCGCCCTCGTTGGTGGGCACTCCATTGGAACGGCAGCGTGCAATCAGTTCAGATACAGGCTTTTCAACTTCAGCACGACCACCGCAAACGGAGCAGATCCGACCATCGACGCGGCCTTTCTTCCGGAGCTGCAAGCACTCTGCCCACAGAATGGAGACGGGTCGAGAAGGGTGGACATGGATATGGATAGTGGGGGGAGATTGGACGAGTCTTTCTTCGTCAACCTGATTAACAGGCGGGGAGTGCTGGAGTCCGATCAGAGGGTCTGGGAAGACCCGTCGACTCAGGCTTTGGTGAGAAGATTTCTGGGCGGGAGAGGGTCTCTTGGGTTGAACTTCAACAGAGAGTTCAGTAAATCCATGGTGAAGATGAGTAACATCGGAGTCAAGTCTGGATCTGAGGGTGAAATTCGAACAGTTTGCTCTGCACTTAATTAA 999 54.05 MDGSHQSLTRFILLLLAFSALSSLHVVHGQLTIVGFYSSTCPQLESVVRSTVEGHLSSNPAMAPGLLRMFFHDCFVHGCDASILIAGPSSERTARQNSNLRGFDVIDDAKTQLEALCPGVVSCADILAIAARDVVFLSKGPSWEVPTGRRDGRVSLASDAADLPGARDSVAEQVRKFTEKNLNTLDLVALVGGHSIGTAACNQFRYRLFNFSTTTANGADPTIDAAFLPELQALCPQNGDGSRRVDMDMDSGGRLDESFFVNLINRRGVLESDQRVWEDPSTQALVRRFLGGRGSLGLNFNREFSKSMVKMSNIGVKSGSEGEIRTVCSALN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36361041 36362207 + Bma018018.1 Bma03g01409 80082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01409 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Bma03g01409 332 CDD secretory_peroxidase 30 330 IPR033905 GO:0004601|GO:0042744
Bma03g01409 332 ProSiteProfiles Plant heme peroxidase family profile. 35 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 SUPERFAMILY Heme-dependent peroxidases 34 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 Gene3D - 35 332 - -
Bma03g01409 332 PANTHER PEROXIDASE 10 330 - -
Bma03g01409 332 Pfam Peroxidase 48 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 Gene3D Peroxidase, domain 2 164 311 - -
Bma03g01409 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 PANTHER PEROXIDASE 25-RELATED 10 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01409 332 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01409 Bma-Chr3:36361041 Bma03g01416 Bma-Chr3:37171462 0 dispersed
Bma03g01403 Bma-Chr3:35700436 Bma03g01409 Bma-Chr3:36361041 0 proximal
Bma03g01409 Bma-Chr3:36361041 Bma03g01414 Bma-Chr3:37067169 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01409 K00430 - qsu:111997082 433.335