Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01416 ATGGCTCCAGGCTTGCTTCGAATGTTCTTCCACGACTGCTTCGTCCACGGCTGCGACGCTTCCATTCTCATCGCCGGCCCGTCCTCTGAACGAACGGCCCGTCAAAACAGTAATCTCAGAGGCTTTGATGTCATCGACGACGCCAAGACCCAGCTCGAGGCTCTCTGCCCCGGTGTCGTCTCCTGCGCCGACATTCTCGCCATCGCGGCCCGAGACGTTGTTTTTCTGAGCAAAGGACCAAGCTGGGAAGTGCCCACCGGGCGTAGGGATGGGCGGGTGTCTTTGGCTTCTGATGCCGCCGATTTGCCTGGAGCTCGAGATTCCGTTGCAGAACAGGTGAGAAAGTTCACTGAGAAGAATCTGAACACCCTAGACCTCGTCGCCCTCGTTGGTGGGCACTCCATCGGAACGGCAGCGTGCAATCAGTTCAGATACAGGCTTTTCAACTTCAGCACGACCACCGCAAACGGAGCAGATCCGACCATCGACCCGGCCTTTCTTCCGGAGCTGCAAGCACTCTGCCCACAGAATGGAGACGGGTCGAGAAGGGTGGACATGGATACGGATAGTGGGGGGAGATTGGACGAGTCTTTCTTCGTCAACCTGATGAACAGGCGGGGAGTGCTGGAGTCCGATCAGAGGCTCTGGGAAGACCCGTCGACTCAGGCTTTGGTGAGAAGCTTTCTGGGCGGGAGAGGGTCTCTTGGGTTGAACTTCAACAGAGAGTTCAGTAAATCCATGGTGAAGATGAGTAACATCGGCGTCAAGTCTGGATCTGAGGGTGAAATTCGAACAGTTTGCTCTGCAGTTAATTAG 816 56.0 MAPGLLRMFFHDCFVHGCDASILIAGPSSERTARQNSNLRGFDVIDDAKTQLEALCPGVVSCADILAIAARDVVFLSKGPSWEVPTGRRDGRVSLASDAADLPGARDSVAEQVRKFTEKNLNTLDLVALVGGHSIGTAACNQFRYRLFNFSTTTANGADPTIDPAFLPELQALCPQNGDGSRRVDMDTDSGGRLDESFFVNLMNRRGVLESDQRLWEDPSTQALVRSFLGGRGSLGLNFNREFSKSMVKMSNIGVKSGSEGEIRTVCSAVN 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37171462 37172442 - Bma018034.1 Bma03g01416 80089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01416 271 ProSitePatterns Peroxidases proximal heme-ligand signature. 125 135 IPR019793 -
Bma03g01416 271 PANTHER PEROXIDASE 25-RELATED 1 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 Gene3D - 1 271 - -
Bma03g01416 271 Pfam Peroxidase 1 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Bma03g01416 271 ProSiteProfiles Plant heme peroxidase family profile. 1 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Haem peroxidase superfamily signature 60 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Haem peroxidase superfamily signature 125 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Haem peroxidase superfamily signature 78 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 CDD secretory_peroxidase 1 270 IPR033905 GO:0004601|GO:0042744
Bma03g01416 271 Gene3D Peroxidase, domain 2 103 250 - -
Bma03g01416 271 PANTHER PEROXIDASE 1 269 - -
Bma03g01416 271 PRINTS Plant peroxidase signature 185 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 59 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 124 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 245 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 40 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 78 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 PRINTS Plant peroxidase signature 201 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma03g01416 271 SUPERFAMILY Heme-dependent peroxidases 1 271 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01409 Bma-Chr3:36361041 Bma03g01416 Bma-Chr3:37171462 0 dispersed
Bma03g01414 Bma-Chr3:37067169 Bma03g01416 Bma-Chr3:37171462 0 dispersed
Bma03g01416 Bma-Chr3:37171462 Bma12g00372 Bma-Chr12:7081697 1.04E-128 dispersed
Bma03g01415 Bma-Chr3:37141928 Bma03g01416 Bma-Chr3:37171462 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01416 K00430 - qsu:111997082 384.8