Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01451 ATGGAAAATATTGCTGCTCAGTTGAAGAGAGGGATATCGAGACAGTTTTCCACGGGTTCGATTCGGCGGAACCTGAGCCGGCAGTTCACGCGTCAGTCGTCTCTGGACCCAAGGCGGAACAACATGAGATTCAGCTTCGGAAGGCAGTCTTCGATGGACCCTATTCGGCGCTGCCCTGGCCATGATAATGACCTCACCGTCCCGGAGAACCTGGACGCCACGATGAACCTTCTCTTCATGGCGTGCCGGGGAGACGTTAAAGGTGTCGATGACTTGCTCGATGAAGGAGTTGACGTGAATAGCATCGACTTAGATGGACGAACTGCGCTGCATATCGCCGCATGCGAAGGCCATATCGAGGTTGTCAAACTTTTGCTCAGCCGCAGGGCTAATATCGACGCTCGGGATCGTTGGGGCAGTACGGCAGCTGCTGATGCCAAATACTATGGGCAGACAGAAGCCTTCAGCATTTTGAGGGCACGCGGTGCAAAAATTCCAAAAATCAGGAAGACGCCAATGACTGTTGCAAATCCCCGTGAAGTTCCAGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGAGTGATGGTATCTCAAAGGGAACATATCAAGTCGCCAAATGGAATGGGACAAAGGTTGCTGTAAAAATACTTGATAAAGAGAGCTACTCAAACCCTGATACTATAAATGCTTTCAGACACGAATTGACAATATTAGAAAAGGTCCGTCATCCAAATGTAGTTCAGTTTGTTGGAGCAGTTACCCAGAATGTTCCCATGATGATTGTTTCAGAATATCATTCAAAGGGAGACTTGGCTAGTTATCTTCAAAAGAAAGGACGCCTTTCTCCATCTAAAGCTCTCAGATTTGCGCTTGATATTGCTAGGCATGGAATGAACTATCTTCATGAATGTAAGCCAGACGCTATTATCCACTGTGATCTAAGGCCAAAAAATATTTTGCTCGATAATGGAGGTCAACTGAAGGTAGCTGGATTTGGTTTGATAAGATTGTCAAAAATTTCTCCCGACAAAGCAAAAGTAGCACTCCCTGAGACTAACGTTGACCATTCAAGCTTATATTTGGCTCCTGAGGTTTACAAGAATGAAATATTTGACAGAAGTGTGGACTCATTTTCTTTTGGTCTTATTGTGTATGAGATGATTGAGGGCATACAGCCTTTCCATCCTAAATCTCCAGAAGAGGTCGCAAAAACAATATGTTTGGAAGGACAAAGACCTCAATTCAAGATCAAATTAAAAAGTTATCCTCCAGATTTGAGAGAGTTAATAGAGGAGTGCTGGGATCCAGAGCCTGTTGTACGGCCAACATTTTCAGAGATTATTGTTCGTTTGGATAAAATTGTATCCAACTGCTCAAAACAAGGATGGTGGAAAGACACTTTTAAGCTTCCGTGGTATGTGTAG 1431 44.44 MENIAAQLKRGISRQFSTGSIRRNLSRQFTRQSSLDPRRNNMRFSFGRQSSMDPIRRCPGHDNDLTVPENLDATMNLLFMACRGDVKGVDDLLDEGVDVNSIDLDGRTALHIAACEGHIEVVKLLLSRRANIDARDRWGSTAAADAKYYGQTEAFSILRARGAKIPKIRKTPMTVANPREVPEYELNPLELQIRRSDGISKGTYQVAKWNGTKVAVKILDKESYSNPDTINAFRHELTILEKVRHPNVVQFVGAVTQNVPMMIVSEYHSKGDLASYLQKKGRLSPSKALRFALDIARHGMNYLHECKPDAIIHCDLRPKNILLDNGGQLKVAGFGLIRLSKISPDKAKVALPETNVDHSSLYLAPEVYKNEIFDRSVDSFSFGLIVYEMIEGIQPFHPKSPEEVAKTICLEGQRPQFKIKLKSYPPDLRELIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPWYV 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41255879 41261585 - Bma018107.1 Bma03g01451 80124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01451 476 ProSitePatterns Tyrosine protein kinases specific active-site signature. 311 323 IPR008266 GO:0004672|GO:0006468
Bma03g01451 476 CDD STKc_MAP3K-like 199 453 - -
Bma03g01451 476 PIRSF ILK 8 474 - -
Bma03g01451 476 SUPERFAMILY Protein kinase-like (PK-like) 202 453 IPR011009 -
Bma03g01451 476 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Bma03g01451 476 Gene3D Phosphorylase Kinase; domain 1 187 269 - -
Bma03g01451 476 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 473 - -
Bma03g01451 476 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
Bma03g01451 476 Pfam Ankyrin repeats (3 copies) 79 165 IPR002110 GO:0005515
Bma03g01451 476 Pfam Protein tyrosine and serine/threonine kinase 200 452 IPR001245 GO:0004672|GO:0006468
Bma03g01451 476 Gene3D - 48 184 IPR036770 -
Bma03g01451 476 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 473 - -
Bma03g01451 476 SMART ANK_2a 73 101 IPR002110 GO:0005515
Bma03g01451 476 SMART ANK_2a 105 134 IPR002110 GO:0005515
Bma03g01451 476 SMART ANK_2a 138 167 IPR002110 GO:0005515
Bma03g01451 476 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Bma03g01451 476 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Bma03g01451 476 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Bma03g01451 476 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Bma03g01451 476 Gene3D Transferase(Phosphotransferase) domain 1 270 469 - -
Bma03g01451 476 SUPERFAMILY Ankyrin repeat 75 174 IPR036770 -
Bma03g01451 476 ProSiteProfiles Protein kinase domain profile. 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01451 Bma-Chr3:41255879 Bma04g01688 Bma-Chr4:53102334 0 dispersed
Bma03g01451 Bma-Chr3:41255879 Bma10g00075 Bma-Chr10:773719 2.16E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66426 PF07714 PK_Tyr_Ser-Thr 4.40E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01451 - - csv:101213574 827.009