Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01529 ATGCATACCAAGCTTTCCGTTCTACTTTATCTAATGTTCGTCTCCAGCTTTGTGGCTTCTCAAACCATCGTCAAAAACCTCCCTGGCTACTCTGGAGATCTTCCCTTCAAACTTGAAACTGGGTATGTGGGCGTGGGAGATTCGGATGATGTTCAGCTGTTCTACTACTTTTTTGAATCCGAGAGGAGCCCGAAGGACGATCCCCTCGTGCTTTGGCTCACTGGTGGTCCTGGGTGTTCTTCATTTTTTGGGTTGGCTTTTGAAGTTGGCCCTGTGTACTTCCCAGATGCTAAATGGAAAGGTCCAAATGTTCACGATAAATTGCCAAATTTAGGATTGAGTCCATATTCGTGGACAAAGTTCCTCAACATGATATTTCTAGACGCCCCTGTCGGGACGGGATTCTCTTATGCGAAAACTCCAGAAGCGTACCAAACTGGTGATTCGTTACAAGTTGGACAAACTTATGAATTTCTAAGAAAGTGGCTTATGGCACATCCTAAGTTTCTAAAAAACCCACTTTACCTTTCCGGTGATTCCTTCGCCGGCACAATAATTCCAATGATTGTTCAAGAAATAACTGATGGTATTGAAGCTGGACATCATCCAGTCTTGAATCTCAAGGGCTATTCGCTCGGAAACCCTGTCACTGACACTGATGCTGAGGCATGGTCAAGATTTGAATTTGCTTACCAGAAGACATTAATATCGAAAAAACTCTACGAGTCTATCACTGCTAACTGTAAAGGCAATTACAATTCCTCAGTTGGAACAGCTGATCCACTTTGCCAAGAGAGTCTGAATGAGTATGCAGAGAAATATAATTATATGTACGCATACCGTTGGGCTAATAATCCGGCAGTTCAAGAGGCTCTTCATATTCGCAAGGGGAGTGTGAAACTGTGGGTGAGATGCAATGCGAGCATGCATTATCTCTATGAGGTCTCAAGCGCTCTGGTTTACCATCAGAATCTCATCGCGAAAGGTTATCGTATTTTTATTTATAGTGGGGATCATGATTTGTCTCTTCCACATACATCAACACAAGCATGGATAGAGTCTTTGAATTTGACTATTGTTGATGATTGGAGACCATGGTTTGTTGAGGATGAAATTGCTGGGTACTCGATGGAATATGTGGGCAAAAAATGCCGATTGACGTATGCGACTGTGAAGGGAGCAGGTCACACAGCTCCTGAGTATAAACGAAAAGAATGCTTTGCAATGGCTTCTAGGTGGTTTTCATACAACTCACTTTAG 1260 42.94 MHTKLSVLLYLMFVSSFVASQTIVKNLPGYSGDLPFKLETGYVGVGDSDDVQLFYYFFESERSPKDDPLVLWLTGGPGCSSFFGLAFEVGPVYFPDAKWKGPNVHDKLPNLGLSPYSWTKFLNMIFLDAPVGTGFSYAKTPEAYQTGDSLQVGQTYEFLRKWLMAHPKFLKNPLYLSGDSFAGTIIPMIVQEITDGIEAGHHPVLNLKGYSLGNPVTDTDAEAWSRFEFAYQKTLISKKLYESITANCKGNYNSSVGTADPLCQESLNEYAEKYNYMYAYRWANNPAVQEALHIRKGSVKLWVRCNASMHYLYEVSSALVYHQNLIAKGYRIFIYSGDHDLSLPHTSTQAWIESLNLTIVDDWRPWFVEDEIAGYSMEYVGKKCRLTYATVKGAGHTAPEYKRKECFAMASRWFSYNSL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 50155699 50159057 - Bma018231.1 Bma03g01529 80202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01529 419 Gene3D alpha/beta hydrolase 18 419 IPR029058 -
Bma03g01529 419 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 272 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 Pfam Serine carboxypeptidase 28 273 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 266 416 - -
Bma03g01529 419 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 6 272 - -
Bma03g01529 419 SUPERFAMILY alpha/beta-Hydrolases 24 415 IPR029058 -
Bma03g01529 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 386 399 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Bma03g01529 419 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 266 416 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01529 Bma-Chr3:50155699 Bma04g00134 Bma-Chr4:1077493 4.75E-139 dispersed
Bma03g01529 Bma-Chr3:50155699 Bma03g01531 Bma-Chr3:50379953 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01529 K16296 - fve:101307753 481.1