Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01529 | ATGCATACCAAGCTTTCCGTTCTACTTTATCTAATGTTCGTCTCCAGCTTTGTGGCTTCTCAAACCATCGTCAAAAACCTCCCTGGCTACTCTGGAGATCTTCCCTTCAAACTTGAAACTGGGTATGTGGGCGTGGGAGATTCGGATGATGTTCAGCTGTTCTACTACTTTTTTGAATCCGAGAGGAGCCCGAAGGACGATCCCCTCGTGCTTTGGCTCACTGGTGGTCCTGGGTGTTCTTCATTTTTTGGGTTGGCTTTTGAAGTTGGCCCTGTGTACTTCCCAGATGCTAAATGGAAAGGTCCAAATGTTCACGATAAATTGCCAAATTTAGGATTGAGTCCATATTCGTGGACAAAGTTCCTCAACATGATATTTCTAGACGCCCCTGTCGGGACGGGATTCTCTTATGCGAAAACTCCAGAAGCGTACCAAACTGGTGATTCGTTACAAGTTGGACAAACTTATGAATTTCTAAGAAAGTGGCTTATGGCACATCCTAAGTTTCTAAAAAACCCACTTTACCTTTCCGGTGATTCCTTCGCCGGCACAATAATTCCAATGATTGTTCAAGAAATAACTGATGGTATTGAAGCTGGACATCATCCAGTCTTGAATCTCAAGGGCTATTCGCTCGGAAACCCTGTCACTGACACTGATGCTGAGGCATGGTCAAGATTTGAATTTGCTTACCAGAAGACATTAATATCGAAAAAACTCTACGAGTCTATCACTGCTAACTGTAAAGGCAATTACAATTCCTCAGTTGGAACAGCTGATCCACTTTGCCAAGAGAGTCTGAATGAGTATGCAGAGAAATATAATTATATGTACGCATACCGTTGGGCTAATAATCCGGCAGTTCAAGAGGCTCTTCATATTCGCAAGGGGAGTGTGAAACTGTGGGTGAGATGCAATGCGAGCATGCATTATCTCTATGAGGTCTCAAGCGCTCTGGTTTACCATCAGAATCTCATCGCGAAAGGTTATCGTATTTTTATTTATAGTGGGGATCATGATTTGTCTCTTCCACATACATCAACACAAGCATGGATAGAGTCTTTGAATTTGACTATTGTTGATGATTGGAGACCATGGTTTGTTGAGGATGAAATTGCTGGGTACTCGATGGAATATGTGGGCAAAAAATGCCGATTGACGTATGCGACTGTGAAGGGAGCAGGTCACACAGCTCCTGAGTATAAACGAAAAGAATGCTTTGCAATGGCTTCTAGGTGGTTTTCATACAACTCACTTTAG | 1260 | 42.94 | MHTKLSVLLYLMFVSSFVASQTIVKNLPGYSGDLPFKLETGYVGVGDSDDVQLFYYFFESERSPKDDPLVLWLTGGPGCSSFFGLAFEVGPVYFPDAKWKGPNVHDKLPNLGLSPYSWTKFLNMIFLDAPVGTGFSYAKTPEAYQTGDSLQVGQTYEFLRKWLMAHPKFLKNPLYLSGDSFAGTIIPMIVQEITDGIEAGHHPVLNLKGYSLGNPVTDTDAEAWSRFEFAYQKTLISKKLYESITANCKGNYNSSVGTADPLCQESLNEYAEKYNYMYAYRWANNPAVQEALHIRKGSVKLWVRCNASMHYLYEVSSALVYHQNLIAKGYRIFIYSGDHDLSLPHTSTQAWIESLNLTIVDDWRPWFVEDEIAGYSMEYVGKKCRLTYATVKGAGHTAPEYKRKECFAMASRWFSYNSL | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 50155699 | 50159057 | - | Bma018231.1 | Bma03g01529 | 80202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01529 | 419 | Gene3D | alpha/beta hydrolase | 18 | 419 | IPR029058 | - | |
Bma03g01529 | 419 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 6 | 272 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | Pfam | Serine carboxypeptidase | 28 | 273 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 18 | 266 | 416 | - | - | |
Bma03g01529 | 419 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 18 | 6 | 272 | - | - | |
Bma03g01529 | 419 | SUPERFAMILY | alpha/beta-Hydrolases | 24 | 415 | IPR029058 | - | |
Bma03g01529 | 419 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 386 | 399 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 162 | 187 | IPR001563 | GO:0004185|GO:0006508 | |
Bma03g01529 | 419 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 266 | 416 | IPR001563 | GO:0004185|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01529 | Bma-Chr3:50155699 | Bma04g00134 | Bma-Chr4:1077493 | 4.75E-139 | dispersed | |
Bma03g01529 | Bma-Chr3:50155699 | Bma03g01531 | Bma-Chr3:50379953 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01529 | K16296 | - | fve:101307753 | 481.1 |