Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01531 ATGGATCCAAAGCTTTCCATTCTACTTTATCTACTGTTAGTGTCCGCCTTTGTGGCGTCTCAGAGCATCGTCAGAAACCTCCCTGGCTACTCTGGAGATCTTCCCTTCAAACTTGAAACTGGGTATGTGGGCGTGGGAGATTCGGAAGATGTTCAGCTGTTCTACTACTTTTTTGAATCCGAGAGGAGCCCGAAGGACGATCCCCTCGTGCTTTGGCTCACTGGTGGTCCTGGGTGTTCCTCATTTTTTGGGTTGGCTTTTGAAGTTGGTCCTATATACTTTCCAGATGCTCATTGGGAAGGTGCCAATGTGGGTGGAGAATCGTCAGTCTTAGGATTGAATCCGTATTCATGGACTAAGTTCCTCAACATGATATTTCTAGACGCACCTGTCGGCACGGGATTTTCATATGCAAAAACGACGGAAGCGTATGAAGTCACAGATACTTTACAAGTTGCACACACTTATGAATTTCTCAGGAAGTGGCTTCTGGCACATCCAGACTTTCTCAAGAATCCCCTTTATCTTTCCGGTGATTCGTATGCAGGCACAATTATTCCGATGATCGCTCAAGAAATTACTTACGGTATGGAAGCTGGACATGAGCCTCTTATGAATCTGAAAGGCTATACGATTGGAAACCCCGTCACTGACAGGCCTGCTGAAACCTTGTCAAGACATGAGTTTGCGTACCACAAGGCACTCATATCAAAAAGACTCTATCAGTCTCTCACAGACAATTGCAAAAGCGATGACGATAACTTAGCTGGAAAAAACGATTCGTTGTGTCAAGCAAGTATGAACGAGTTCAAGAAGTGCACAGAAAAACTAAGTTTTCACAACATATTGGAACATTCTTGTTATAACTTCACGGATCCAGATATGCGATCTAATTGGGATCCAATATCACATCCACGGAAGGATTTCATTTCCTTGATTCCACAAGTTCCTCCTCCTCGTAATCCAACCTGTCGGAGACATAATTACATGTACGCATACTACTGGGCGAATGATCAATCGGTTCAAAATGCGCTGCATATTCGCGAGGGGAGTATAGAAGAGTGGTTGAGATGCAATCGAAGTCTTGCTTATACGTTTAACGTTTTTAGTGCTACTATTTACCACAAGAATCTCCTCGATAAAGGTTATCGAATTTTTATTTATAGCGGTGACCATGACATGCTCGTCTCGCATTTGTCGACACAAGCATGGATAGAGTCTTTAAACTTGACTATTATCGATAATTGGAGACCATGGTTTGTTGATGATGAGATTGCCGGATACTCGAAGGAGTATGCAGGTGAAAAATACGGGTGGACGTATGCAACTGTGAAGGGATCAGGGCACACAGCTCCAGAGTACAATCCAAAAGAATGCTTTGCAATGGCTTCCAGATGGTTTTCTCACAAACCTCTTTAG 1419 43.48 MDPKLSILLYLLLVSAFVASQSIVRNLPGYSGDLPFKLETGYVGVGDSEDVQLFYYFFESERSPKDDPLVLWLTGGPGCSSFFGLAFEVGPIYFPDAHWEGANVGGESSVLGLNPYSWTKFLNMIFLDAPVGTGFSYAKTTEAYEVTDTLQVAHTYEFLRKWLLAHPDFLKNPLYLSGDSYAGTIIPMIAQEITYGMEAGHEPLMNLKGYTIGNPVTDRPAETLSRHEFAYHKALISKRLYQSLTDNCKSDDDNLAGKNDSLCQASMNEFKKCTEKLSFHNILEHSCYNFTDPDMRSNWDPISHPRKDFISLIPQVPPPRNPTCRRHNYMYAYYWANDQSVQNALHIREGSIEEWLRCNRSLAYTFNVFSATIYHKNLLDKGYRIFIYSGDHDMLVSHLSTQAWIESLNLTIIDNWRPWFVDDEIAGYSKEYAGEKYGWTYATVKGSGHTAPEYNPKECFAMASRWFSHKPL 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 50379953 50383340 + Bma018235.1 Bma03g01531 80204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01531 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 469 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 6 469 - -
Bma03g01531 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 Pfam Serine carboxypeptidase 28 468 IPR001563 GO:0004185|GO:0006508
Bma03g01531 472 Gene3D alpha/beta hydrolase 18 297 IPR029058 -
Bma03g01531 472 SUPERFAMILY alpha/beta-Hydrolases 24 471 IPR029058 -
Bma03g01531 472 Gene3D - 322 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01531 Bma-Chr3:50379953 Bma04g00134 Bma-Chr4:1077493 6.21E-146 dispersed
Bma03g01529 Bma-Chr3:50155699 Bma03g01531 Bma-Chr3:50379953 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01531 K16296 - qsu:111997404 535.413