Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g01547 | ATGAGAGAACATGACAGGGCTACCATACATGAAGCAATGGAGCAGCAGACCATAAGCGTTGCTAAGGCTGGTCTTGTAACAACTCTCAGAACTAGGACGATAGTATTTGGTGCAACAAATCCTAAAGGGCACTATGATCCTGATCAACCTTTATCTGTCAATACAACCCTCTCTGGTCCCTTGCTGAGCAGATTTGATATAGTCCTTGTCCTCCTAGACACAAAGAATGCTGAATGGGATGCAGTTGTTTCTTCGCACATTCTGTCTGAGGGTGAAGTAGAACAAGGGAAGTTTGAAGATCTATCAAAATCTTGGTCTTTGCCTATGATTCGCAGGTATATTCACTTTGTGAAAGGGTACTTCAGACCTGTGCTGACAAAGGAAGCAGAAAATATCATCTCAAATTATTATCAGCTCCAAAGAAGATCGGCAACTCATAATGCAGCCAGGACAACCGTCCGAATGCTTGAAAGTTTGATCCGCTTAGCTCAAGGTCTGCCCTTTTTTGTTGAATTATGTTATCAGCCATATTTTTATCTTTGTGCTGATTTTGATACAAAAAATTTTGCAGCTCACGCCAGACTCATGTTTAGAAATGAAGTTACTCGGTTAGATGCCATTACGGCTATATTATGCGTTGAATCATCCATGACTACCTCAGCTATTGTGGACAGTGTCGGGAATGCACTCCACTCCAATTTTACAGAGAATCCAGATGTGGAATGTATCCTTTTCAGGTTTTGTTAG | 747 | 41.37 | MREHDRATIHEAMEQQTISVAKAGLVTTLRTRTIVFGATNPKGHYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNAEWDAVVSSHILSEGEVEQGKFEDLSKSWSLPMIRRYIHFVKGYFRPVLTKEAENIISNYYQLQRRSATHNAARTTVRMLESLIRLAQGLPFFVELCYQPYFYLCADFDTKNFAAHARLMFRNEVTRLDAITAILCVESSMTTSAIVDSVGNALHSNFTENPDVECILFRFC | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 51453499 | 51457620 | - | Bma018258.1 | Bma03g01547 | 80220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g01547 | 248 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 1 | 243 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | PANTHER | DNA HELICASE MCM9 | 1 | 243 | - | - | |
Bma03g01547 | 248 | Gene3D | - | 1 | 167 | IPR027417 | - | |
Bma03g01547 | 248 | SMART | mcm | 1 | 218 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | ProSiteProfiles | MCM family domain profile. | 1 | 87 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | Pfam | MCM P-loop domain | 1 | 89 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | Pfam | MCM AAA-lid domain | 109 | 164 | IPR041562 | - | |
Bma03g01547 | 248 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 61 | 69 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 11 | 24 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 34 | 46 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bma03g01547 | 248 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 4 | 167 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01547 | Bma-Chr3:51453499 | Bma10g01097 | Bma-Chr10:32664098 | 2.75E-154 | dispersed | |
Bma03g01547 | Bma-Chr3:51453499 | Bma03g00566 | Bma-Chr3:4689080 | 5.97E-18 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g01547 | K10738 | - | oeu:111379335 | 364.77 |