Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g01561 AGGCTCCAGGGGAATCCTGCTTGCTCAGACCTCAGCTTATCTGAGTTTTGTATCTCAGAGAATGGTATTAGTAGTAATGGAAGCAATGCCTTGACTGGTAACTGTCTGAATTCAATTTGTCCTCCTCCTTATGAATGTTCTTCGACATTATGCCCATCGAGATGTACTTGTGCTGCTCCTCTCATTGTTGGATATCGTTTGAAAAGCCCAGGATTCTCAGATTTTATTGCCTACCAAAGAAATTTCAATCATTATCTGACCTCCGGATTGGCCTTAAATCTTGAACAGCTATTAGTTTCTTCATTTTGGTGGGAAGAAGGGCCTCGATTAGGAATGTCTTTAAAGATTTTTCCAGCTAATGATAACAACAATTCTTTTCAGTTCAGCCGGACTGAGATTCGACGGATCATGTACATGTTTACAGCTTGGAAAATCCGTGATAATGCTACATTCGGACCGTATGAAGTGACCAGTTTCACTCTCTCAGACATTTACAAGGATGTTTTAATCACAACTTCATCCAATATGAGCAAAGGTGAGCTAGCTGGCATTATAGTGGGTGCAATCGCAGGTGCAGTAATATTATCTGCAATTGTTTCTCTTCTCATAGTAAGAGCTTATATGAGGAAACGCCAAATATTTGCCGGAAGACCTCGATGTGATGAGAGATCTGTATTTTCACATGCAGCATCTACGTCGTCCATTAAAATCGACGGTGTGAAAAAATTCACTTATGGAGAAATGGCTTTGGCTACAAATAATTTCGACAGCTCTGCTCTGGTTGGGCAAGGAGGTTACGGAAAGGTATATAGAGGAATTCTGAAGGAAGGCTCCGTCGTCGCGATAAAACGGGCACAAGAAGGGTCATTGCAGGGCGAGAAGGAGTTCTTGACAGAAATTCAATTATTATCTCGGCTTCATCACCGGAACCTTGTGTCTTTGATCGGATATTGTGACGAAGAAGGCGAACAGATGTTGGTGTATGAATTTATGTTGAATGGCACTCTAAGAGATCACCTTTCTGATATGGCAGTCAACAGCAAGGAGCCTTTGAGTTTCACAATGCGATTGAGAATAGCCTTGGCATCGGCCAAGGGAATCCTTTACCTGCATACCGAAGCTGACCCTCCAATATTCCACCGAGACATCAAGGCCAGCAATATATTATTGGATTCCAAGTTTACAGCAAAAGTGGCTGATTTTGGACTTTCTCGACTTGCCCCGATGCCTGATATTGAAGGGTCTGCACCTGCTCCTGTATCGACGGTAGTGAAGGGAACGCCGGGCTATCTTGATCCGGAGTATTTCTTAACTCAGAAACTGACGGACAAAAGTGATGTTTATAGTCTTGGTGTGGTGCTTTTAGAACTCTTGACTGGAATGCACCCAATCTCACACGGCAAAAACATTGTTCGAGAGGTGAAAAGAATGTACCGAAGTGGGAAAATCTTCTCAGTCATTGACGATCGAATGGGGTCTTACCCATCCGAGGTTGTGGAAAGATTTGTGTCTCTGGCCCTCAAGTGCTGTCAAGACGAATCGGATGGACGGCCTTCAATGGCGGAGGTTGTTCGAGTGCTCGAAAGCATATGTGGGACAACGTCGGAGCCTGATTTTAAAGCCTCAAAATCTCCTGTTACCGACACTAGGAAGGCATCTACTCCGCCATCTTCTTCATCTTCATTGGTCGGAAGCTTTTACGTGTCAACGGATGTCTCCGGCAGCGAACTAGTGAGTGGGACTGTACCCACCATCACACCCAGATAA 1767 44.2 RLQGNPACSDLSLSEFCISENGISSNGSNALTGNCLNSICPPPYECSSTLCPSRCTCAAPLIVGYRLKSPGFSDFIAYQRNFNHYLTSGLALNLEQLLVSSFWWEEGPRLGMSLKIFPANDNNNSFQFSRTEIRRIMYMFTAWKIRDNATFGPYEVTSFTLSDIYKDVLITTSSNMSKGELAGIIVGAIAGAVILSAIVSLLIVRAYMRKRQIFAGRPRCDERSVFSHAASTSSIKIDGVKKFTYGEMALATNNFDSSALVGQGGYGKVYRGILKEGSVVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMLNGTLRDHLSDMAVNSKEPLSFTMRLRIALASAKGILYLHTEADPPIFHRDIKASNILLDSKFTAKVADFGLSRLAPMPDIEGSAPAPVSTVVKGTPGYLDPEYFLTQKLTDKSDVYSLGVVLLELLTGMHPISHGKNIVREVKRMYRSGKIFSVIDDRMGSYPSEVVERFVSLALKCCQDESDGRPSMAEVVRVLESICGTTSEPDFKASKSPVTDTRKASTPPSSSSSLVGSFYVSTDVSGSELVSGTVPTITPR 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 51976003 51978473 + Bma018283.1 Bma03g01561 80234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g01561 588 SUPERFAMILY Protein kinase-like (PK-like) 232 531 IPR011009 -
Bma03g01561 588 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Bma03g01561 588 Gene3D Phosphorylase Kinase; domain 1 226 330 - -
Bma03g01561 588 Gene3D Transferase(Phosphotransferase) domain 1 331 548 - -
Bma03g01561 588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 562 - -
Bma03g01561 588 Pfam Protein kinase domain 258 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01561 588 SMART serkin_6 255 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01561 588 MobiDBLite consensus disorder prediction 537 563 - -
Bma03g01561 588 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 562 - -
Bma03g01561 588 CDD STKc_IRAK 261 530 - -
Bma03g01561 588 ProSiteProfiles Protein kinase domain profile. 255 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma03g01561 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00250 Bma-Chr3:1937533 Bma03g01561 Bma-Chr3:51976003 9.76E-70 dispersed
Bma03g01561 Bma-Chr3:51976003 Bma04g01239 Bma-Chr4:36567348 1.59E-109 dispersed
Bma05g00513 Bma-Chr5:25441025 Bma03g01561 Bma-Chr3:51976003 2.43E-70 dispersed
Bma08g01023 Bma-Chr8:49338283 Bma03g01561 Bma-Chr3:51976003 7.23E-70 dispersed
Bma03g01561 Bma-Chr3:51976003 Bma12g00043 Bma-Chr12:966690 1.03E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66427 PF00069 Pkinase 4.40E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g01561 - - jre:108986649 728.398