Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00033 | TTCTCCTTCTGCAGCCCTCCCATGGCTATTGACTTCATGGCCGGCTTCCCTAACGTTGCCGATCGACAGATGGCCCTCCAGGAGGCTGCCTCTCAAGGTTTGAAGAGCATGGAACACCTGATCTACGCCCTTTCTCAGAAGCAGCACTACAATCACTCCGATTGCACAGATCTCACCGACGCTGCGGTTTCCAAGTTCAACAAGGTCATTTCTCTTCTCAACCGGACCGGCCACGCGCGCTTCAGGCGCGGTCCCCTTCCCTCTCCCCCCCCATCGTCGACCTCCTCTGCCCCTCTCTCCCAGGCTTTGAGCCTTACCCCGACTACTTTCACTTCTCCCTCAACTGTCTCCAACCCTCCCATTGCGCCTCCGGCGAGCTTCGCTCTGCCTCAGCCGCCACAAAGCATGACTCTTGACTTCACGAAACCTAATGTTTTGAGCTCAAATCTCAAGAGTAACGACCTCGAGTTCACCAAAGACAGCTTCAGCGTCTCGTCAAGTTCCTCGTTCATGTCGTCGGCCATCACCGGAGACGGGAGCGTGTCAAATGGAAAGCTCGGACCTTCGATCTTCCTATCCTCCGCACCGGCAGTCTCCGCGGGAAAGCCGCCTCTCTCAGCGGCGCCCTACAAGAAGAGGTGTCACGAGCACTCGCAGTCTCATTCCCACTCCTACTCTCAGTCTCACTCCCACTCCCACTCGGAAAACATCTCCGGAAAACTTTCCGGTTCTACTTCCGCTTCCGGCAAGTGCCACTGCTCCAAAAGAAGGAAAAACCGTGTAAAGAAAACAATAAGAGTCCCGGCGGTGAGTTCAAAGATCGCGGACATTCCACCGGACGAGTATTCGTGGAGAAAATACGGACAGAAGCCGATCAAAGGGTCGCCATACCCACGGGGATACTACAAGTGCAGTACTGTGAGGGGATGCCCGGCGAGGAAACACGTAGAAAGGGCTCCGGACGATCCGAAGATGCTAATCGTAACGTACGAGGGAGAGCACCGGCATACGCAGGGGGCGATGCAGGAGAACATGGGCGGAGGAGTAGGGCTGGTGTTCGAGTCAACGTGA | 1071 | 56.02 | FSFCSPPMAIDFMAGFPNVADRQMALQEAASQGLKSMEHLIYALSQKQHYNHSDCTDLTDAAVSKFNKVISLLNRTGHARFRRGPLPSPPPSSTSSAPLSQALSLTPTTFTSPSTVSNPPIAPPASFALPQPPQSMTLDFTKPNVLSSNLKSNDLEFTKDSFSVSSSSSFMSSAITGDGSVSNGKLGPSIFLSSAPAVSAGKPPLSAAPYKKRCHEHSQSHSHSYSQSHSHSHSENISGKLSGSTSASGKCHCSKRRKNRVKKTIRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPKMLIVTYEGEHRHTQGAMQENMGGGVGLVFEST | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 369663 | 371397 | + | Bma018485.1 | Bma04g00033 | 80402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00033 | 356 | SUPERFAMILY | WRKY DNA-binding domain | 276 | 337 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma04g00033 | 356 | PANTHER | WRKY TRANSCRIPTION FACTOR 17-RELATED | 21 | 355 | - | - | |
Bma04g00033 | 356 | Pfam | WRKY DNA -binding domain | 280 | 336 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma04g00033 | 356 | ProSiteProfiles | WRKY domain profile. | 273 | 339 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma04g00033 | 356 | MobiDBLite | consensus disorder prediction | 223 | 250 | - | - | |
Bma04g00033 | 356 | MobiDBLite | consensus disorder prediction | 79 | 136 | - | - | |
Bma04g00033 | 356 | Pfam | Plant zinc cluster domain | 211 | 276 | IPR018872 | - | |
Bma04g00033 | 356 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 21 | 355 | IPR044810 | GO:0003700 | |
Bma04g00033 | 356 | MobiDBLite | consensus disorder prediction | 198 | 262 | - | - | |
Bma04g00033 | 356 | Gene3D | WRKY domain | 263 | 339 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma04g00033 | 356 | SMART | WRKY_cls | 278 | 338 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma04g00033 | 356 | MobiDBLite | consensus disorder prediction | 95 | 116 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02124 | Bma-Chr1:77734156 | Bma04g00033 | Bma-Chr4:369663 | 3.59E-160 | dispersed | |
Bma01g02264 | Bma-Chr1:79806697 | Bma04g00033 | Bma-Chr4:369663 | 2.63E-61 | dispersed | |
Bma02g00060 | Bma-Chr2:493419 | Bma04g00033 | Bma-Chr4:369663 | 1.43E-72 | dispersed | |
Bma04g00033 | Bma-Chr4:369663 | Bma09g00258 | Bma-Chr9:13682400 | 6.28E-73 | dispersed | |
Bma04g00033 | Bma-Chr4:369663 | Bma01g00400 | Bma-Chr1:3338515 | 5.44E-86 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57103 | PF10533 | Plant_zn_clust | 9.30E-15 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00033 | - | - | bhj:120087087 | 462.996 |