Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00034 TTTTTGGAGTTAGGGTTTTTAGTAGGAATGGGAGACGTTGTGATTGATAAATTGGCATCTGCTAGAAAATCCTTAAGGCTTAGCTTGGAGAAATCTAAGGCTTTAGGTTCTGCTCTAGATAAAACTGGCCCCAGATTGGAAGAGATTAAGCGGAGATTACCTTCCCTTGAGGCGGCTGTCCGGCCAATCCGTGCTGACAAGGACGCTCTAACTTCAGTCGGTGGCCATATTAACCGAGCAGTCGGCCCTGCAGCAGCAGTGCTTAAAGTTTTTGATGCCATTCATGGCCTTGAGAAGTCACTTTTATCAGATCCACGCGGTGATCTACCTGGTTATCTGTCGGTGTTGAAACGCCTTGAAGAGGCATTGAGATTTTTGGGTGACAACTGTGGATTGGCAATTCAGTGGTTGGAAGATATAGTGGAGTACCTACATGATAATACCGTTGCAGATGAGCGGTACATAGCAAACTTGAAGACTTCACTGGTAAATCTTCGAGCATTGCAGAATGATAAGGAAAATAAAGATCTTGATGGAGGGCTTTTGCACGCTGCAATGGACAAATTAGAAAATGAGTTCCGCAGGCTACTTACTGAGCATAGTGTGCCTCTTCCAATGTCATCTTCATCCCTGCTTGAGGAGCAAGCAGCCATTGCACCATCACCCTTACCTGTTTCTGTTATTCATAAACTGCAGGCTATTCTGGGCAGATTGACCGCTAACAAGAGGCACGGGAAGGGCATGTCGATTTATATAGAAGTACGCAGTTCGAATGTTAGAGCAAGTTTGAAAGCTCTGGATTTGGACTATCTTCAGATATCACTGACAGAGTTCAATGAAGTACAAAACATAGAAGGACACATAGCACAGTGGGGAAGACACTTAGAGTTTTCTGTGAAACACTTGTTTGAGGCAGAGTACAAGCTTTGCAAAGAAATATTTGAGAGACTTGGGCAGGAATTGTGGATGGATTGCTTTGCAAAGATAGCAGCTGAGTCTGGCATCCTTTTATTTCTTCAGTTTGGGAAGACAGTTACAGACAGTAAGATGAATCCCATTAAATTGTTGATGTTGTTAGATATATTTGCATATTTGAGTACTTTGAGGCTGGACTTCAACCGGCTTTTTGGCGGGGCAGCATGTGTTGATATCCAAAACCTTACAAGAGATCTCATTAAGAGGGTTATTAATGGAGCATCTGAAATCTTCTGGGAACTTCGGAATCAGGTAGAGTTACAGAGGCAAATTCCTCCTCCATCTGACGGGAGTGTTCCGAGGTTGGTAACCTTTATTTCTGATTTCTGTAATAAACTGCTTGGGGACAATTATAAGCCAATTCTAACCCAAGCTCTGGTCATTTACCATAGCTGGAAGCGTGAGAAATTTCAAGAAAAACTTATTGTTGATGAAGTGTTGGAAATTGTGAAAGCAGTAGAGATGAATCTAGAGACATGGATTAAGTCTTATGAGGATTCCACTTTATCAAACCTTTTTGCAATGAATAACCACGGTCATTTATACAAGCATTTGAAGGGAACCAAATTGGGGGATCTTAAGGGGCAACTTTGGTTGAAGGAACATGAACAATTGAAGGACTATTATGCCACAGATTTTTTAAGAGATAGCTGGAATAAGCTTCCAGGTCATTTAAGTAGAGAAGGATTGATTTTATTCTCTGGGGGACGGGCTACTGCTCGAGATCTTGTCAAGAAAAGATTGAAAAGTTTTAATGAAGCTTTTGATGACATGTATAAGAAGCAATCAAACTGGGTTGTTCCCGACCTGGAAATGCGGGAGAAGATGTGCCAGCTCATTGTGCAGGCAGTTGTGCCTGTTTATAGAAGCTACATGCAAAATTATGGGGCCCTGGTTGAGCAAGATGGAAGCTCTTACAAGTATGCTAAGTATACAATAGAGACATTGGAAAAAATGCTTGTGTCTCTTTTTCAGCCAAAGCCTACTAGATATGGCAGTTTTAAGGGAAGGCAGACGAGTGGGAAATTCAGCAATGGCACTGCAAATTTTCGACGAACTGCCTCTGCAGTTATGTGA 2052 42.06 FLELGFLVGMGDVVIDKLASARKSLRLSLEKSKALGSALDKTGPRLEEIKRRLPSLEAAVRPIRADKDALTSVGGHINRAVGPAAAVLKVFDAIHGLEKSLLSDPRGDLPGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLHDNTVADERYIANLKTSLVNLRALQNDKENKDLDGGLLHAAMDKLENEFRRLLTEHSVPLPMSSSSLLEEQAAIAPSPLPVSVIHKLQAILGRLTANKRHGKGMSIYIEVRSSNVRASLKALDLDYLQISLTEFNEVQNIEGHIAQWGRHLEFSVKHLFEAEYKLCKEIFERLGQELWMDCFAKIAAESGILLFLQFGKTVTDSKMNPIKLLMLLDIFAYLSTLRLDFNRLFGGAACVDIQNLTRDLIKRVINGASEIFWELRNQVELQRQIPPPSDGSVPRLVTFISDFCNKLLGDNYKPILTQALVIYHSWKREKFQEKLIVDEVLEIVKAVEMNLETWIKSYEDSTLSNLFAMNNHGHLYKHLKGTKLGDLKGQLWLKEHEQLKDYYATDFLRDSWNKLPGHLSREGLILFSGGRATARDLVKKRLKSFNEAFDDMYKKQSNWVVPDLEMREKMCQLIVQAVVPVYRSYMQNYGALVEQDGSSYKYAKYTIETLEKMLVSLFQPKPTRYGSFKGRQTSGKFSNGTANFRRTASAVM 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 372870 374921 + Bma018486.1 Bma04g00034 80403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00034 683 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma04g00034 683 SUPERFAMILY Cullin repeat-like 87 649 IPR016159 -
Bma04g00034 683 Coils Coil 155 175 - -
Bma04g00034 683 Gene3D Exocyst complex component Exo70 137 656 - -
Bma04g00034 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 673 IPR004140 GO:0000145|GO:0006887
Bma04g00034 683 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 15 673 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02121 Bma04g00034 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00593 Bma-Chr1:5415825 Bma04g00034 Bma-Chr4:372870 6.74E-46 dispersed
Bma01g02125 Bma-Chr1:77736610 Bma04g00034 Bma-Chr4:372870 5.74E-34 dispersed
Bma04g00034 Bma-Chr4:372870 Bma09g01005 Bma-Chr9:49536443 0 dispersed
Bma01g02121 Bma-Chr1:77629710 Bma04g00034 Bma-Chr4:372870 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00034 K07195 - rcu:8265192 1041.95