Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00037 | GAACGTATTCCAATTGAGGAGGTGTTTGAACAATTGAAATGCTCAAGAGAAGGTCTTTCATCCGAGGAAGGAGCCAACCGGCTTCAAGTTTTTGGTCCAAACAAACTCGAAGAGAAGAAGGAGAGCAAAATTCTCAAGTTTTTGGGCTTTATGTGGAATCCGTTATCCTGGGTCATGGAAGCTGCTGCGATCATGGCTATTGCGTTGGCAAATGGAGGTGGAAGGCCTCCTGACTGGCAGGACTTCATAGGGATCATCATCTTACTTTTAATCAACTCTACAATCAGTTTTATAGAAGAAAACAATGCTGGAAACGCTGCTGCAGCTCTTATGGCTGGTCTTGCTCCCAAAACTAAGGGAGAAATTGAAGCAGTTGTTATTGCCACTGGTGTGCACACCTTTTTCGGCAAAGCTGCTCACTTGGTAGACAACACCAATCAAGTTGGCCATTTCCAGAAAGTTCTAACGGCCATTGGTAATTTCTGTATTTGCTCAATCGCCGTTGGAATTGTTATTGAGATTATTGTTATGTACCCCATACAACATAGAGAGTACAGAGACGGCATTGACAACTTGCTGGTGCTTTTGATCGGAGGAATTCCAATCGCCATGCCAACTGTTTTGTCCGTCACCATGGCCATTGGTTCTCACAGGCTTTCCCAGCAGGGTGCTATCACTAAGAGAATGACAGCTATTGAGGAAATGGCAGGTATGGATGTCCTCTGCAGTGACAAGACTGGAACCCTCACTTTGAACAAGTTGACTGTAGACAGAAGCTTGGTCGAAGTGTTTGTTAAGGGGGTGGAAAAAGAGTACGTGATTGTTCTAGCTGCAAGAGCTTCTCGCATTGAAAATCAGGATGCCATTGATGCTGCTATTGTTGGAACACTTGCAGATCCGAAGGAGGCACGAGCTGGTATTACGGAAGTTCATTTCTTTCCATTTAATCCCGTAGATAAGAGAACTGCTCTCACTTACATTGATTCTCAAGGGAACTGGCATCGTGCTAGCAAGGGCGCCCCTGAGCAAATATTAACTCTATGTAATGCGAAGGAAGATGTGAAGAAAAAGGTTCACTCGGTTATTGATAAGTTCGCTGAGCGAGGACTTCGTTCTTTGGCTGTTGCGAGACAGGAAGTGCCCGAGAAATCTAAAGATGGTCCAGGTGGGCCATGGCAGTTTGTTGGTTTATTATCTCTGTTTGATCCTCCCAGGCATGATAGTGCAGAAACCATCAGAAGAGCTCTGAACCTTGGAGTAAATGTCAAGATGATTACTGGCGATCAGCTAGCCATTGCCAAGGAGACCGGGCGAAGACTTGGAATGGGAACAAACATGTACCCTTCTTCTGCATTACTTGGTCGAGACAAGGATGCTTCAATTGCTGCCCTACCTGTAGATGAATTGATTGAGAAAGCTGATGGGTTTGCCGGTGTATTTCCAGAACACAAGTATGAAATCGTAAAGAAGTTACAAGAGAAAAAACACATATGTGGTATGACTGGAGATGGAGTGAATGATGCTCCAGCTCTAAAGAAGGCAGACATTGGCATTGCTGTTGCTGACGCTACTGATGCTGCAAGAAGTGCTTCAGACATTGTCTTGACTGAACCCGGATTGAGTGTAATTATTAGTGCTGTGTTGACTAGCAGGGCAATTTTCCAAAGGATGAAGAACTACACTATTTATGCCGTTTCAATTACAATACGTATTGTGTTTGGCTTCATGTTCATTGCATTGATTTGGAAGTTCGACTTTGCACCATTCATGGTTTTAATCATAGCCATTCTAAACGACGGAACAATCATGACAATTTCAAAGGATCGAGTTAAGCCATCCCCTCTACCAGACAGCTGGAAATTGAAAGAGATTTTTGCTACTGGTGTCGTCCTGGGAGGGTACTTGGCTCTCATGACAGTCATATTTTTCTGGGCGATGAGAGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCACTAAGGCATAGCCCTGACGAAATGATGGCAGCCTTGTATCTACAAGTGAGTATTGTCAGCCAGGCTCTTATTTTCGTCACCCGATCCCGCAGTTGGTCCTATGTTGAACGACCCGGTCTGCTCTTAGTTGGTGCTTTCATAATTGCTCAGTTGATAGCAACTATAATAGCAGTCTATGCTGACTGGGGTTTTGCAAGAATTAAGGGAACTGGGTGGGGATGGGCTGGTGTAATCTGGCTCTATAGTGTGGTTACCTATGTCCCTCTTGATATTCTCAAGTTTACTATTCGTTACGCACTCAGTGGGAAAGCTTGGAATAATCTGTTGGAGAATAAGACTGCCTTCACGACGAAGAAAGATTACGGCAAAGAAGAGAGAGAAGCTCAGTGGGCGACTGCTCAGAGGACTCTGCATGGTCTTCAAGCTCCGGAAACCACCAACGTTTTCTCTGATAAGAGTAGTTACAGAGAGCTATCTGAGATTGCCGAGCAAGCCAAGAGACGCGCAGAGGTGGCGAGGCTCCGGGAGTTGAATACATTGAAGGGTCATGTTGAATCAGTGGTGAAGCTCAAAGGGTTGGACATCGACAACATCCAGCAACACTACACTGTT | 2592 | 44.91 | ERIPIEEVFEQLKCSREGLSSEEGANRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFIGIIILLLINSTISFIEENNAGNAAAALMAGLAPKTKGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAVGIVIEIIVMYPIQHREYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLVEVFVKGVEKEYVIVLAARASRIENQDAIDAAIVGTLADPKEARAGITEVHFFPFNPVDKRTALTYIDSQGNWHRASKGAPEQILTLCNAKEDVKKKVHSVIDKFAERGLRSLAVARQEVPEKSKDGPGGPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGRDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMRDTDFFSDKFGVRSLRHSPDEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVGAFIIAQLIATIIAVYADWGFARIKGTGWGWAGVIWLYSVVTYVPLDILKFTIRYALSGKAWNNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQAPETTNVFSDKSSYRELSEIAEQAKRRAEVARLRELNTLKGHVESVVKLKGLDIDNIQQHYTV | 864 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 382787 | 386844 | - | Bma031078 | Bma04g00037 | 80406 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00037 | 864 | Pfam | Cation transporter/ATPase, N-terminus | 3 | 65 | IPR004014 | - | |
Bma04g00037 | 864 | Gene3D | - | 813 | 864 | - | - | |
Bma04g00037 | 864 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 119 | 844 | - | - | |
Bma04g00037 | 864 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 119 | - | - | |
Bma04g00037 | 864 | CDD | P-type_ATPase_H | 18 | 754 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Bma04g00037 | 864 | Pfam | E1-E2 ATPase | 118 | 221 | - | - | |
Bma04g00037 | 864 | SMART | Cation_ATPase_N_a_2 | 1 | 71 | IPR004014 | - | |
Bma04g00037 | 864 | PANTHER | PLASMA MEMBRANE ATPASE | 119 | 844 | - | - | |
Bma04g00037 | 864 | Coils | Coil | 815 | 835 | - | - | |
Bma04g00037 | 864 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 244 | 250 | IPR018303 | - | |
Bma04g00037 | 864 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 476 | 591 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | Gene3D | - | 50 | 119 | - | - | |
Bma04g00037 | 864 | Gene3D | - | 254 | 401 | IPR023299 | GO:0000166 | |
Bma04g00037 | 864 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 2 | 760 | IPR023298 | - | |
Bma04g00037 | 864 | SFLD | p-type atpase | 224 | 552 | IPR044492 | - | |
Bma04g00037 | 864 | SUPERFAMILY | HAD-like | 238 | 548 | IPR036412 | - | |
Bma04g00037 | 864 | Gene3D | - | 239 | 538 | IPR023214 | - | |
Bma04g00037 | 864 | Pfam | haloacid dehalogenase-like hydrolase | 238 | 515 | - | - | |
Bma04g00037 | 864 | Gene3D | - | 130 | 728 | - | - | |
Bma04g00037 | 864 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 119 | 719 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Bma04g00037 | 864 | SFLD | C1.7: P-type atpase like | 224 | 552 | - | - | |
Bma04g00037 | 864 | PANTHER | PLASMA MEMBRANE ATPASE | 1 | 119 | - | - | |
Bma04g00037 | 864 | PRINTS | P-type cation-transporting ATPase superfamily signature | 501 | 520 | - | - | |
Bma04g00037 | 864 | PRINTS | P-type cation-transporting ATPase superfamily signature | 242 | 256 | - | - | |
Bma04g00037 | 864 | PRINTS | P-type cation-transporting ATPase superfamily signature | 396 | 407 | - | - | |
Bma04g00037 | 864 | PRINTS | P-type cation-transporting ATPase superfamily signature | 524 | 536 | - | - | |
Bma04g00037 | 864 | PRINTS | P-type cation-transporting ATPase superfamily signature | 418 | 428 | - | - | |
Bma04g00037 | 864 | PRINTS | H+-transporting ATPase (proton pump) signature | 473 | 489 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | PRINTS | H+-transporting ATPase (proton pump) signature | 501 | 517 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | PRINTS | H+-transporting ATPase (proton pump) signature | 358 | 376 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | PRINTS | H+-transporting ATPase (proton pump) signature | 673 | 694 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | PRINTS | H+-transporting ATPase (proton pump) signature | 532 | 557 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma04g00037 | 864 | Gene3D | - | 120 | 129 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma02g00051 | Bma04g00037 | CCT | |
Bma01g02129 | Bma04g00037 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00037 | Bma-Chr4:382787 | Bma06g01014 | Bma-Chr6:46708766 | 1.62E-47 | dispersed | |
Bma01g02129 | Bma-Chr1:77782617 | Bma04g00037 | Bma-Chr4:382787 | 2.67E-45 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00037 | K01535 | - | rcu:8278620 | 1357.81 |