Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00037 GAACGTATTCCAATTGAGGAGGTGTTTGAACAATTGAAATGCTCAAGAGAAGGTCTTTCATCCGAGGAAGGAGCCAACCGGCTTCAAGTTTTTGGTCCAAACAAACTCGAAGAGAAGAAGGAGAGCAAAATTCTCAAGTTTTTGGGCTTTATGTGGAATCCGTTATCCTGGGTCATGGAAGCTGCTGCGATCATGGCTATTGCGTTGGCAAATGGAGGTGGAAGGCCTCCTGACTGGCAGGACTTCATAGGGATCATCATCTTACTTTTAATCAACTCTACAATCAGTTTTATAGAAGAAAACAATGCTGGAAACGCTGCTGCAGCTCTTATGGCTGGTCTTGCTCCCAAAACTAAGGGAGAAATTGAAGCAGTTGTTATTGCCACTGGTGTGCACACCTTTTTCGGCAAAGCTGCTCACTTGGTAGACAACACCAATCAAGTTGGCCATTTCCAGAAAGTTCTAACGGCCATTGGTAATTTCTGTATTTGCTCAATCGCCGTTGGAATTGTTATTGAGATTATTGTTATGTACCCCATACAACATAGAGAGTACAGAGACGGCATTGACAACTTGCTGGTGCTTTTGATCGGAGGAATTCCAATCGCCATGCCAACTGTTTTGTCCGTCACCATGGCCATTGGTTCTCACAGGCTTTCCCAGCAGGGTGCTATCACTAAGAGAATGACAGCTATTGAGGAAATGGCAGGTATGGATGTCCTCTGCAGTGACAAGACTGGAACCCTCACTTTGAACAAGTTGACTGTAGACAGAAGCTTGGTCGAAGTGTTTGTTAAGGGGGTGGAAAAAGAGTACGTGATTGTTCTAGCTGCAAGAGCTTCTCGCATTGAAAATCAGGATGCCATTGATGCTGCTATTGTTGGAACACTTGCAGATCCGAAGGAGGCACGAGCTGGTATTACGGAAGTTCATTTCTTTCCATTTAATCCCGTAGATAAGAGAACTGCTCTCACTTACATTGATTCTCAAGGGAACTGGCATCGTGCTAGCAAGGGCGCCCCTGAGCAAATATTAACTCTATGTAATGCGAAGGAAGATGTGAAGAAAAAGGTTCACTCGGTTATTGATAAGTTCGCTGAGCGAGGACTTCGTTCTTTGGCTGTTGCGAGACAGGAAGTGCCCGAGAAATCTAAAGATGGTCCAGGTGGGCCATGGCAGTTTGTTGGTTTATTATCTCTGTTTGATCCTCCCAGGCATGATAGTGCAGAAACCATCAGAAGAGCTCTGAACCTTGGAGTAAATGTCAAGATGATTACTGGCGATCAGCTAGCCATTGCCAAGGAGACCGGGCGAAGACTTGGAATGGGAACAAACATGTACCCTTCTTCTGCATTACTTGGTCGAGACAAGGATGCTTCAATTGCTGCCCTACCTGTAGATGAATTGATTGAGAAAGCTGATGGGTTTGCCGGTGTATTTCCAGAACACAAGTATGAAATCGTAAAGAAGTTACAAGAGAAAAAACACATATGTGGTATGACTGGAGATGGAGTGAATGATGCTCCAGCTCTAAAGAAGGCAGACATTGGCATTGCTGTTGCTGACGCTACTGATGCTGCAAGAAGTGCTTCAGACATTGTCTTGACTGAACCCGGATTGAGTGTAATTATTAGTGCTGTGTTGACTAGCAGGGCAATTTTCCAAAGGATGAAGAACTACACTATTTATGCCGTTTCAATTACAATACGTATTGTGTTTGGCTTCATGTTCATTGCATTGATTTGGAAGTTCGACTTTGCACCATTCATGGTTTTAATCATAGCCATTCTAAACGACGGAACAATCATGACAATTTCAAAGGATCGAGTTAAGCCATCCCCTCTACCAGACAGCTGGAAATTGAAAGAGATTTTTGCTACTGGTGTCGTCCTGGGAGGGTACTTGGCTCTCATGACAGTCATATTTTTCTGGGCGATGAGAGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGATCACTAAGGCATAGCCCTGACGAAATGATGGCAGCCTTGTATCTACAAGTGAGTATTGTCAGCCAGGCTCTTATTTTCGTCACCCGATCCCGCAGTTGGTCCTATGTTGAACGACCCGGTCTGCTCTTAGTTGGTGCTTTCATAATTGCTCAGTTGATAGCAACTATAATAGCAGTCTATGCTGACTGGGGTTTTGCAAGAATTAAGGGAACTGGGTGGGGATGGGCTGGTGTAATCTGGCTCTATAGTGTGGTTACCTATGTCCCTCTTGATATTCTCAAGTTTACTATTCGTTACGCACTCAGTGGGAAAGCTTGGAATAATCTGTTGGAGAATAAGACTGCCTTCACGACGAAGAAAGATTACGGCAAAGAAGAGAGAGAAGCTCAGTGGGCGACTGCTCAGAGGACTCTGCATGGTCTTCAAGCTCCGGAAACCACCAACGTTTTCTCTGATAAGAGTAGTTACAGAGAGCTATCTGAGATTGCCGAGCAAGCCAAGAGACGCGCAGAGGTGGCGAGGCTCCGGGAGTTGAATACATTGAAGGGTCATGTTGAATCAGTGGTGAAGCTCAAAGGGTTGGACATCGACAACATCCAGCAACACTACACTGTT 2592 44.91 ERIPIEEVFEQLKCSREGLSSEEGANRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFIGIIILLLINSTISFIEENNAGNAAAALMAGLAPKTKGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAVGIVIEIIVMYPIQHREYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLVEVFVKGVEKEYVIVLAARASRIENQDAIDAAIVGTLADPKEARAGITEVHFFPFNPVDKRTALTYIDSQGNWHRASKGAPEQILTLCNAKEDVKKKVHSVIDKFAERGLRSLAVARQEVPEKSKDGPGGPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGRDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMRDTDFFSDKFGVRSLRHSPDEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVGAFIIAQLIATIIAVYADWGFARIKGTGWGWAGVIWLYSVVTYVPLDILKFTIRYALSGKAWNNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQAPETTNVFSDKSSYRELSEIAEQAKRRAEVARLRELNTLKGHVESVVKLKGLDIDNIQQHYTV 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 382787 386844 - Bma031078 Bma04g00037 80406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00037 864 Pfam Cation transporter/ATPase, N-terminus 3 65 IPR004014 -
Bma04g00037 864 Gene3D - 813 864 - -
Bma04g00037 864 PANTHER CALCIUM-TRANSPORTING ATPASE 119 844 - -
Bma04g00037 864 PANTHER CALCIUM-TRANSPORTING ATPASE 1 119 - -
Bma04g00037 864 CDD P-type_ATPase_H 18 754 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma04g00037 864 Pfam E1-E2 ATPase 118 221 - -
Bma04g00037 864 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bma04g00037 864 PANTHER PLASMA MEMBRANE ATPASE 119 844 - -
Bma04g00037 864 Coils Coil 815 835 - -
Bma04g00037 864 ProSitePatterns E1-E2 ATPases phosphorylation site. 244 250 IPR018303 -
Bma04g00037 864 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 476 591 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 Gene3D - 50 119 - -
Bma04g00037 864 Gene3D - 254 401 IPR023299 GO:0000166
Bma04g00037 864 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 760 IPR023298 -
Bma04g00037 864 SFLD p-type atpase 224 552 IPR044492 -
Bma04g00037 864 SUPERFAMILY HAD-like 238 548 IPR036412 -
Bma04g00037 864 Gene3D - 239 538 IPR023214 -
Bma04g00037 864 Pfam haloacid dehalogenase-like hydrolase 238 515 - -
Bma04g00037 864 Gene3D - 130 728 - -
Bma04g00037 864 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 119 719 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma04g00037 864 SFLD C1.7: P-type atpase like 224 552 - -
Bma04g00037 864 PANTHER PLASMA MEMBRANE ATPASE 1 119 - -
Bma04g00037 864 PRINTS P-type cation-transporting ATPase superfamily signature 501 520 - -
Bma04g00037 864 PRINTS P-type cation-transporting ATPase superfamily signature 242 256 - -
Bma04g00037 864 PRINTS P-type cation-transporting ATPase superfamily signature 396 407 - -
Bma04g00037 864 PRINTS P-type cation-transporting ATPase superfamily signature 524 536 - -
Bma04g00037 864 PRINTS P-type cation-transporting ATPase superfamily signature 418 428 - -
Bma04g00037 864 PRINTS H+-transporting ATPase (proton pump) signature 473 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 PRINTS H+-transporting ATPase (proton pump) signature 501 517 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 PRINTS H+-transporting ATPase (proton pump) signature 358 376 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 PRINTS H+-transporting ATPase (proton pump) signature 673 694 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 PRINTS H+-transporting ATPase (proton pump) signature 532 557 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00037 864 Gene3D - 120 129 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00051 Bma04g00037 CCT
Bma01g02129 Bma04g00037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00037 Bma-Chr4:382787 Bma06g01014 Bma-Chr6:46708766 1.62E-47 dispersed
Bma01g02129 Bma-Chr1:77782617 Bma04g00037 Bma-Chr4:382787 2.67E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00037 K01535 - rcu:8278620 1357.81