Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00048 | TCGACTATGGCGTCGCCGGGAACCAGGTCGCCGTTACCGTTTCTTTTGAGGAGAAAATCAAGCGGGGAAATAAAAAACTTGACGTCCGTTTCGAGTAGCCTCTTGCCGGCGTTCGGAACAGTGGTCGACGATGGATATTTACACCTCAGAAAATTCATTATCGTTCCCTATGATCGTAGATATCGGTTATGGCAGACCTTTCTAGTTGTATTGGTGGTGTACTCAGCGTGGGCATCTCCTTTCGAACTAGCCTTCAAAAAGGTGGCAACTGGATCTCTCCTACCCGTTGATTTGGCTGTCAATGGATTCTTTGCCATTGATATAGTCTTAACTTTCTTTGTCGCTTACTTGGACAAATCAACCTATCTCCTCGTTGATGATCATAAGAAGATAGCTAAAAGGTATGTTACGAGCATGTGGTTCACGATGGATGTTGCTTCGACCCTTCCTTATCAAATAATATACAAACTTATCACAGGAAACTTGCACCGTGGTGAGACCTTTGGTTTCCTCAACTTTCTGCGCTTATGGCGACTTAGGCGTGTTAGTCAACTCTTTGCTAGGCTGGAGAAAGATACACGCTTTAGCTACTTTTGGACAAGATACTTCAAACTAATTTGTGTGACGTTGTTTGCAGTGCATGCAGCAGGGTGCTTTTACTTTTGGATGGCAACTCGTTATAAATCCTCTCAAAACACATGGATTGGACTGGATGTCCCGAACTTTGAGCAGCAAAGCATTTGGCTCAGCTACACTTACTCCATGTACTGGTCCATCGTCACCTTAACTACAGTAGGCTATGGAGACTTGCACGCAGTCAATATTGGGGAGAAGATATTTAGCATCTTCTACATGCTCTTCAACATTGGTCTCACAGCTTATTTGATTGGCAACATGACCAATCTCATCGTCCACAGTGCTGCTCAAACCTTTGCCATGAGAGATGCAATCAATGAGATACTTACATATGCAAGCAAGAGTAGACTCCCAGAAGGGTTGAAGGACCAGATGCTGGCACACATGCAGCTCAAGTTCAAGACAGCGGAGCTGCAGCAAGAAGAAGTGCTTGGGGACTTGCCTAAAGCAATAAGATCGAGCATTGCTCAGCACCTGTTTCGAAGAACAGTGAAAGATTCATACCTATTCAAGGGAGTCTCTGAAGATCTCATTGTGCAATTGGTATCAGAGATGAAAGCTGAATATTTTCCGCCCAAAGTGGAAATTATATTGCAGAACGAGATACCCACAGATTTCTACATTTTGGTGTCTGGATCAGTGGACTTGTTGTTTTTACAGTTTTTAGCAAAAATGGGACCTGGAGACATGGTAGGAGAAATAGCAGTACTGTTTAATATTCCACAAACTTTCACCGTGAGAACAAAGAGGCTTTCTCAAGTTGTGCGCGTCAGTCATCATCATTTCAAGCAAGTGGTACAACCACACAATGATGGAAAGACAATCATCTCTAACTTCATACAGGTTTGGAAATTGCGGATCTTAAAGTACATCAGTCAATCTATATTTACTTGTTTAGATGGAGACCGGTGTATAATTCTGTTGCTCAATCATATTAATACAATTAAATGTTTTTATTTCACAGGAAGATTGGAAACTTTTATGCCATTACGATCAACACATTGCAAGAGGGTGATAATTTATGGACATCATCCAGATGAAAACGTCAATAATGGCGACAGCATGGGAAAACTAATACTTCTACCACACTCAGTAGAAGAAATCCTCATATTGGCAGAGAAAAAGTTTGGCAAAAGAGGAAATACAATTCTAATGGCTGATGGCTCAGAGGTAGAAGACCTGAATGCTTTAAGAGAGAGCGACCACTTATTTATTGTTTGA | 1857 | 41.79 | STMASPGTRSPLPFLLRRKSSGEIKNLTSVSSSLLPAFGTVVDDGYLHLRKFIIVPYDRRYRLWQTFLVVLVVYSAWASPFELAFKKVATGSLLPVDLAVNGFFAIDIVLTFFVAYLDKSTYLLVDDHKKIAKRYVTSMWFTMDVASTLPYQIIYKLITGNLHRGETFGFLNFLRLWRLRRVSQLFARLEKDTRFSYFWTRYFKLICVTLFAVHAAGCFYFWMATRYKSSQNTWIGLDVPNFEQQSIWLSYTYSMYWSIVTLTTVGYGDLHAVNIGEKIFSIFYMLFNIGLTAYLIGNMTNLIVHSAAQTFAMRDAINEILTYASKSRLPEGLKDQMLAHMQLKFKTAELQQEEVLGDLPKAIRSSIAQHLFRRTVKDSYLFKGVSEDLIVQLVSEMKAEYFPPKVEIILQNEIPTDFYILVSGSVDLLFLQFLAKMGPGDMVGEIAVLFNIPQTFTVRTKRLSQVVRVSHHHFKQVVQPHNDGKTIISNFIQVWKLRILKYISQSIFTCLDGDRCIILLLNHINTIKCFYFTGRLETFMPLRSTHCKRVIIYGHHPDENVNNGDSMGKLILLPHSVEEILILAEKKFGKRGNTILMADGSEVEDLNALRESDHLFIV | 618 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 469210 | 474604 | + | Bma018499.1 | Bma04g00048 | 80417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00048 | 618 | Pfam | KHA, dimerisation domain of potassium ion channel | 548 | 617 | IPR021789 | - | |
Bma04g00048 | 618 | PANTHER | POTASSIUM CHANNEL AKT1 | 63 | 617 | IPR045319 | GO:0005249|GO:0006813 | |
Bma04g00048 | 618 | PANTHER | POTASSIUM CHANNEL AKT1 | 4 | 62 | IPR045319 | GO:0005249|GO:0006813 | |
Bma04g00048 | 618 | Gene3D | - | 62 | 305 | - | - | |
Bma04g00048 | 618 | SMART | cnmp_10 | 381 | 493 | IPR000595 | - | |
Bma04g00048 | 618 | SUPERFAMILY | cAMP-binding domain-like | 309 | 483 | IPR018490 | - | |
Bma04g00048 | 618 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 381 | 483 | IPR000595 | - | |
Bma04g00048 | 618 | ProSiteProfiles | KHA domain profile. | 549 | 618 | IPR021789 | - | |
Bma04g00048 | 618 | Gene3D | Jelly Rolls | 349 | 501 | IPR014710 | - | |
Bma04g00048 | 618 | CDD | CAP_ED | 381 | 481 | IPR000595 | - | |
Bma04g00048 | 618 | PANTHER | POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED | 63 | 617 | - | - | |
Bma04g00048 | 618 | Pfam | Ion transport protein | 62 | 306 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Bma04g00048 | 618 | PANTHER | POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED | 4 | 62 | - | - | |
Bma04g00048 | 618 | Pfam | Cyclic nucleotide-binding domain | 401 | 479 | IPR000595 | - | |
Bma04g00048 | 618 | SUPERFAMILY | Voltage-gated potassium channels | 56 | 304 | - | - | |
Bma04g00048 | 618 | PRINTS | EAG/ELK/ERG potassium channel family signature | 108 | 117 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma04g00048 | 618 | PRINTS | EAG/ELK/ERG potassium channel family signature | 295 | 304 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma04g00048 | 618 | PRINTS | EAG/ELK/ERG potassium channel family signature | 277 | 288 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma04g00048 | 618 | PRINTS | EAG/ELK/ERG potassium channel family signature | 97 | 107 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma04g00048 | 618 | PRINTS | EAG/ELK/ERG potassium channel family signature | 251 | 268 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00048 | Bma-Chr4:469210 | Bma07g00455 | Bma-Chr7:5495345 | 6.51E-06 | dispersed | |
Bma01g02145 | Bma-Chr1:77959850 | Bma04g00048 | Bma-Chr4:469210 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00048 | K21867 | - | csin:114306787 | 875.159 |