Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00097 ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGAATACATCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCAACAAGTGCTGAAGAGTGAAGCCTATGCTGCTGGAGATATTGGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTGTTTTGGGTGATAAAAGAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCACCAAGAAGCCGAAACAGTAATGGAAATGCCCAAGTTGATGTTTGGGCTCGTGAGGAGGGTCCACACTCTGATTTTTCTGGCCCAAATTCAGGCAGCACAGCTTGTGTTGCAATCATCCAAAACACCCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTGTTATCAAGGAAGGGTCAGGCTTACAATCTGTCTCAAGATCACAAACCAGATCTCGAGGTTGAGAAGGATAGAATTTTAAAAGCTGGTGGATTTATTCACGCCGGCCGAGTCAATGGCAGTTTGAACCTTGCAAGAGCTATTGGTGATGCAGAATTCAAGCAAAATAAAATTTTACCCGTTGAAAGTCAGATTGTAACTGCAAATCCTGAAGTAATCACAGTTGAGCTCTGTGAAGACGACGAATTTATAGTGCTTGCATGTGATGGCATCTGGGATTGCATGTCGAGCCAGCAAGTGGTTGATTTTATACATGAACAACTAAGGACAGAAAACAAACCATCGGGAGTGTGCGAAAGAATGCTGGATCGATGCTTGGGTCCGAGAGCCGGGGGCGAGGGCTGTGACAACATGACCGTCATCTTTGTTCAGTTTAAGAAACATCTTCTTCCCAACTCT 1014 43.79 MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDANTSFFGVYDGHGGKVVAKFCSKYLHQQVLKSEAYAAGDIGTSVQKAFLRMDEMMQGQRGWRELAVLGDKRNKFSGMIEGLIWSPRSRNSNGNAQVDVWAREEGPHSDFSGPNSGSTACVAIIQNTRLVVANAGDSRCVLSRKGQAYNLSQDHKPDLEVEKDRILKAGGFIHAGRVNGSLNLARAIGDAEFKQNKILPVESQIVTANPEVITVELCEDDEFIVLACDGIWDCMSSQQVVDFIHEQLRTENKPSGVCERMLDRCLGPRAGGEGCDNMTVIFVQFKKHLLPNS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 786381 790723 - Bma031082 Bma04g00097 80466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00097 338 Gene3D - 1 331 IPR036457 -
Bma04g00097 338 Pfam Protein phosphatase 2C 143 313 IPR001932 -
Bma04g00097 338 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bma04g00097 338 SMART PP2C_SIG_2 28 330 IPR001932 -
Bma04g00097 338 CDD PP2Cc 23 330 IPR001932 -
Bma04g00097 338 PANTHER PROTEIN PHOSPHATASE 2C 1 335 IPR015655 GO:0004722|GO:0006470
Bma04g00097 338 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bma04g00097 338 SMART PP2C_4 11 328 IPR001932 -
Bma04g00097 338 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Bma04g00097 338 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Bma04g00097 338 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00097 Bma-Chr4:786381 Bma01g02414 Bma-Chr1:81713453 4.47E-40 dispersed
Bma01g01261 Bma-Chr1:17053757 Bma04g00097 Bma-Chr4:786381 1.15E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00097 K17499 - jre:109001007 583.563