Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00097 | ATGGGTATATACCTTAGCAGCCCCAAAACTGATAAGTTCTCGGAAGATGGTGAAAATGAAAGGCTTAAATATGGGCTATCCTCAATGCAAGGCTGGCGTGCTACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGAATACATCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTAGTTGCCAAATTCTGCAGCAAGTATCTTCACCAACAAGTGCTGAAGAGTGAAGCCTATGCTGCTGGAGATATTGGAACTTCTGTTCAGAAAGCATTTCTTAGAATGGATGAAATGATGCAAGGACAAAGGGGTTGGAGAGAATTAGCTGTTTTGGGTGATAAAAGAAACAAGTTTTCTGGGATGATAGAAGGGTTGATTTGGTCACCAAGAAGCCGAAACAGTAATGGAAATGCCCAAGTTGATGTTTGGGCTCGTGAGGAGGGTCCACACTCTGATTTTTCTGGCCCAAATTCAGGCAGCACAGCTTGTGTTGCAATCATCCAAAACACCCGACTTGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTGTTATCAAGGAAGGGTCAGGCTTACAATCTGTCTCAAGATCACAAACCAGATCTCGAGGTTGAGAAGGATAGAATTTTAAAAGCTGGTGGATTTATTCACGCCGGCCGAGTCAATGGCAGTTTGAACCTTGCAAGAGCTATTGGTGATGCAGAATTCAAGCAAAATAAAATTTTACCCGTTGAAAGTCAGATTGTAACTGCAAATCCTGAAGTAATCACAGTTGAGCTCTGTGAAGACGACGAATTTATAGTGCTTGCATGTGATGGCATCTGGGATTGCATGTCGAGCCAGCAAGTGGTTGATTTTATACATGAACAACTAAGGACAGAAAACAAACCATCGGGAGTGTGCGAAAGAATGCTGGATCGATGCTTGGGTCCGAGAGCCGGGGGCGAGGGCTGTGACAACATGACCGTCATCTTTGTTCAGTTTAAGAAACATCTTCTTCCCAACTCT | 1014 | 43.79 | MGIYLSSPKTDKFSEDGENERLKYGLSSMQGWRATMEDAHAAYPDLDANTSFFGVYDGHGGKVVAKFCSKYLHQQVLKSEAYAAGDIGTSVQKAFLRMDEMMQGQRGWRELAVLGDKRNKFSGMIEGLIWSPRSRNSNGNAQVDVWAREEGPHSDFSGPNSGSTACVAIIQNTRLVVANAGDSRCVLSRKGQAYNLSQDHKPDLEVEKDRILKAGGFIHAGRVNGSLNLARAIGDAEFKQNKILPVESQIVTANPEVITVELCEDDEFIVLACDGIWDCMSSQQVVDFIHEQLRTENKPSGVCERMLDRCLGPRAGGEGCDNMTVIFVQFKKHLLPNS | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 786381 | 790723 | - | Bma031082 | Bma04g00097 | 80466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00097 | 338 | Gene3D | - | 1 | 331 | IPR036457 | - | |
Bma04g00097 | 338 | Pfam | Protein phosphatase 2C | 143 | 313 | IPR001932 | - | |
Bma04g00097 | 338 | Pfam | Protein phosphatase 2C | 23 | 103 | IPR001932 | - | |
Bma04g00097 | 338 | SMART | PP2C_SIG_2 | 28 | 330 | IPR001932 | - | |
Bma04g00097 | 338 | CDD | PP2Cc | 23 | 330 | IPR001932 | - | |
Bma04g00097 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 335 | IPR015655 | GO:0004722|GO:0006470 | |
Bma04g00097 | 338 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169 | |
Bma04g00097 | 338 | SMART | PP2C_4 | 11 | 328 | IPR001932 | - | |
Bma04g00097 | 338 | SUPERFAMILY | PP2C-like | 3 | 331 | IPR036457 | - | |
Bma04g00097 | 338 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 330 | IPR001932 | - | |
Bma04g00097 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 1 | 335 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00097 | Bma-Chr4:786381 | Bma01g02414 | Bma-Chr1:81713453 | 4.47E-40 | dispersed | |
Bma01g01261 | Bma-Chr1:17053757 | Bma04g00097 | Bma-Chr4:786381 | 1.15E-128 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00097 | K17499 | - | jre:109001007 | 583.563 |