Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00107 ATGGAAAGTTCAGCTATGGATATGCGAGCTCTCCAGGGAAACGGATCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGCGTTGATGGGGAAATAGTAGGCCTTTTTGGGGTTTTTGACGGTCATGGTGGTGCACGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCTGCTATAGCTGATGCCTACAACCATACAGACTCAGAGTTTCTAAAATCAGAAAATAATCAGCACAGGGATGCTGGATCGACTGCTTCCACTGCTATTTTAGTTGGTAACCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCTGTCATATGCCGTGGTGGAAATGCTATTGCTGTCTCACGAGACCACAAACCCAATCAATCAGATGAAAGACAACGAATTGAAGATGCTGGAGGATTTGTTATATGGGCAGGAACTTGGAGAGTTGGAGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGCTGTTGAAGCAATATGTTGTCGCTGATCCAGAAATTCAGGAGGAAAAGGTAGACAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTATCTAACGAGGAGGCAGTTGCGATGATAAAACCAATCCAGGACCCGGAGGAGGCCGCCAAAAGGTTGATGCAGGAAGCATATCTGAAAGGCAGTGCCGATAACATTACCTGTGTAGTTGTACGTTTCTTGGACAGTCCCCGTGCTACCTCTTGCGAAACTTCCGAGTAA 795 44.91 MESSAMDMRALQGNGSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAIADAYNHTDSEFLKSENNQHRDAGSTASTAILVGNRLLVANVGDSRAVICRGGNAIAVSRDHKPNQSDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIQDPEEAAKRLMQEAYLKGSADNITCVVVRFLDSPRATSCETSE 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 839888 842250 + Bma018553.1 Bma04g00107 80476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00107 264 PANTHER ALPHABET, ISOFORM E-RELATED 13 256 - -
Bma04g00107 264 Gene3D - 2 257 IPR036457 -
Bma04g00107 264 SMART PP2C_SIG_2 16 251 IPR001932 -
Bma04g00107 264 Pfam Protein phosphatase 2C 33 244 IPR001932 -
Bma04g00107 264 ProSitePatterns PPM-type phosphatase domain signature. 36 44 IPR000222 GO:0043169
Bma04g00107 264 SMART PP2C_4 3 249 IPR001932 -
Bma04g00107 264 CDD PP2Cc 12 251 IPR001932 -
Bma04g00107 264 PANTHER PROTEIN PHOSPHATASE 2C 71-RELATED 13 256 - -
Bma04g00107 264 SUPERFAMILY PP2C-like 9 251 IPR036457 -
Bma04g00107 264 ProSiteProfiles PPM-type phosphatase domain profile. 5 251 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02182 Bma04g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00241 Bma-Chr3:1838588 Bma04g00107 Bma-Chr4:839888 7.85E-32 dispersed
Bma04g00107 Bma-Chr4:839888 Bma14g01999 Bma-Chr14:43298404 4.39E-102 dispersed
Bma04g00294 Bma-Chr4:2356598 Bma04g00107 Bma-Chr4:839888 2.28E-46 dispersed
Bma09g00623 Bma-Chr9:43564674 Bma04g00107 Bma-Chr4:839888 2.22E-25 dispersed
Bma13g00101 Bma-Chr13:1054087 Bma04g00107 Bma-Chr4:839888 9.25E-46 dispersed
Bma04g00794 Bma-Chr4:9035602 Bma04g00107 Bma-Chr4:839888 1.43E-21 transposed
Bma01g02182 Bma-Chr1:78713791 Bma04g00107 Bma-Chr4:839888 3.33E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00107 K17506 - tcc:18587664 456.832