Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00118 ATGTGCTTGGATGCAGCTGAGGATGATTCAGCTTCAGAGATTCATCTTCCAGCTGAAATCGATTGGCACATGCTTGACAAATCCAAGTTTTTCTTCCTCGGCGCCGCTCTATTTTCCGGTGTTTCGGCTGCGCTATATCCGGTCATCGTGCTAAAGACCCGGCAGCAGGTTTCTCCCAACAAGCTTTCTTGCTTCAACATGTCCTATTCCATCATCCGCCACGAGGGTTTTCGAGGGTTCTACAGAGGTTTTGGTACCTCTTTAATGGGGACAATTCCAGCTCGAGCTCTTTACATGGGATCCCTCGAAATTACCAAGAGTAGCGTCGGCAGTGCGACTGTCAGATTCGGCTTTTCAGATACGTCTGCTATGGCGATGGCTAATGCTGCTGCAGGGCTAACCTCAGCCATGGCGGCGCAATTAGTTTGGACTCCAGTTGACGTGGTGAGCCAGAGACTAATGGTCCAAGGTAGCAACAATGGCGGAAAAAACATCGCCCCTTATCTCAATTCTCGCAGATACAACAACGGAGTCGACGCTTTTCGAAAAATCATCAATGCCGATGGATTGAGAGGATTGTACAGAGGCTTTGGAATGTCAATATTGACATACGCACCCTCCAACGCCGTTTGGTGGGCTTCTTACTCCGTAGCTCACAGGCTCATCTGGAATGGTCTCAACCAGAGTAATGAAATCCAAGGCCATGGCTATGGCGGGTTTAAGCCAGATTCAAAGACTCTGATTGGAGTTCAGGGGGTAAGTGCAGCCATGGCAAGCGGAATTTCTGCAATGATAACGATGCCGCTTGACACAATAAAGACGAGACTGCAAGTGCTGGACGGAGAAGAAAATGGGCAGAGGCGGCCATTAACAGCATTTCAGACTGTAAAAAACTTGGTGAAGGAAGGTGGATTCACAGCTTGTTACAGAGGATTAGGACCAAGGTGGGCTTCAATGGCTGTATCTGCAACTACGATGATCACCACTTACGAATTTCTCAAACAGCTTTCAGCTAAAACTTAA 1023 48.09 MCLDAAEDDSASEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPVIVLKTRQQVSPNKLSCFNMSYSIIRHEGFRGFYRGFGTSLMGTIPARALYMGSLEITKSSVGSATVRFGFSDTSAMAMANAAAGLTSAMAAQLVWTPVDVVSQRLMVQGSNNGGKNIAPYLNSRRYNNGVDAFRKIINADGLRGLYRGFGMSILTYAPSNAVWWASYSVAHRLIWNGLNQSNEIQGHGYGGFKPDSKTLIGVQGVSAAMASGISAMITMPLDTIKTRLQVLDGEENGQRRPLTAFQTVKNLVKEGGFTACYRGLGPRWASMAVSATTMITTYEFLKQLSAKT 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 954175 955197 - Bma018565.1 Bma04g00118 80487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00118 340 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Bma04g00118 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Bma04g00118 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 339 - -
Bma04g00118 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Bma04g00118 340 Gene3D Mitochondrial carrier domain 28 340 IPR023395 -
Bma04g00118 340 Pfam Mitochondrial carrier protein 252 338 IPR018108 -
Bma04g00118 340 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Bma04g00118 340 Pfam Mitochondrial carrier protein 126 223 IPR018108 -
Bma04g00118 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Bma04g00118 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00118 Bma-Chr4:954175 Bma15g00327 Bma-Chr15:3196727 4.11E-144 dispersed
Bma04g00118 Bma-Chr4:954175 Bma07g01583 Bma-Chr7:51132075 3.35E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00118 K15121 - csv:101213436 521.931