Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00134 ATGGCGAACCTTCATCTCTCTTCTTTTTCCTCCCTTCTTCTTTCACTGGCTGGGTTAGTGGTTGGATTATCTTCCTTTGACGTTAAATATCTTCCTGGATTTGAAGGCCCTCTTCCTTTTCATCTTGAAACTGGATACGTGGGCGTGGGAGAGTCAGAGGATGTGCAGCTTTTCTACTACTTTTTCAAGTCGGAGAAAAGCCCGGAGAACGACCCTGTTCTACTTTGGCTCGTCGGAGGTCCGGGCTGCGCTGCTTTGTCTGCTATAGCTTTTGAGATAGGTCCATTTAATTATGTTACGAACCAGCATAACGGGAGCTTGCCAACCTTGGGACTGAACCCATATTCATGGACGAAGGAAGCGAGTGTAATATTCGTAGACTCCCCTGTTGGGACTGGCTTTTCATATGCAAGAACACCGAACGCTTTCCAGCCTGGAGACTTCAATCAAATTCACCAGATCCATCAATTCCTCCGAAAGTGGTTGACTGGTCATCCAGAATTCATACCAAATCCTCTCTACGTCGGTGGAGATTCATATACCGGCATCCCTCTTCCGGTCATCGTGCAAGAAATCTTACATGGAAACGAGCAAGGTGCTAAGCCATTGGTGAATCTTCAGGGATATTTACTCGGAAATCCAGGAACTCTTTCCACCGTTGAGTCTAATTTCTTAATCCCTTTTTGTCATGGAATGGGATTAATCTCCGACGAACTGTACGAGTCACTGAAGCAGACTTGTAAAGGAGTGTTTGGAGATCTCCACCCCCTCAACCAAGAGTGTTTACGAGATCTCGACGAGGCTCATAAGTGTATTTCAGGAATTAACACTGCACATATTTTGGAACCTATATGTCTTTTTTATTCTCCGAAGCCACGACAAAGATCTCTGTACAACACCAATAATCTCTTCTCCGACTCCGACCCGCCCTTTCCTCCGATAACCTGCCGAAGTTATGGATATTTGCTGTGTGGATACTGGGCCAACGATCCTAAAGTTCAAAAGGCTCTTCAGATACGTGAGGGCAGTATTGGACAATGGAAGCGCTGTGGCCTGGAGGCTTATCGCTTCGAAATTTCGAGTAGTTTTCCGTATCATGTAAACCTTAGTGCTAAAGGAGTTCGATCGTTGATATATAGTGGGGATCACGACGCGATAGTACCATTCTTGGGCACTGAAGCGTGGATAAGGCTTTTGAACTACTCCATTGATGACGATTGGAGGCCATGGCTGGTCAGAGGCCAAGTTGCAGGTTTTACGAGGTCCTACTCGAACAAGATGACCTTTGCGACTGTCAAGGGAGGAGGGCATACAGCTCCAGAATACAAACCAGAAGAATGTTTAGCCATGTTTGCGAGATGGGTATCTGGGCGCCCCCTGTAG 1383 46.49 MANLHLSSFSSLLLSLAGLVVGLSSFDVKYLPGFEGPLPFHLETGYVGVGESEDVQLFYYFFKSEKSPENDPVLLWLVGGPGCAALSAIAFEIGPFNYVTNQHNGSLPTLGLNPYSWTKEASVIFVDSPVGTGFSYARTPNAFQPGDFNQIHQIHQFLRKWLTGHPEFIPNPLYVGGDSYTGIPLPVIVQEILHGNEQGAKPLVNLQGYLLGNPGTLSTVESNFLIPFCHGMGLISDELYESLKQTCKGVFGDLHPLNQECLRDLDEAHKCISGINTAHILEPICLFYSPKPRQRSLYNTNNLFSDSDPPFPPITCRSYGYLLCGYWANDPKVQKALQIREGSIGQWKRCGLEAYRFEISSSFPYHVNLSAKGVRSLIYSGDHDAIVPFLGTEAWIRLLNYSIDDDWRPWLVRGQVAGFTRSYSNKMTFATVKGGGHTAPEYKPEECLAMFARWVSGRPL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1077493 1080697 - Bma018582.1 Bma04g00134 80503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00134 460 Gene3D - 318 460 - -
Bma04g00134 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 SUPERFAMILY alpha/beta-Hydrolases 28 459 IPR029058 -
Bma04g00134 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 457 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 Pfam Serine carboxypeptidase 32 457 IPR001563 GO:0004185|GO:0006508
Bma04g00134 460 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 12 457 - -
Bma04g00134 460 Gene3D alpha/beta hydrolase 24 292 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01529 Bma-Chr3:50155699 Bma04g00134 Bma-Chr4:1077493 4.75E-139 dispersed
Bma03g01531 Bma-Chr3:50379953 Bma04g00134 Bma-Chr4:1077493 6.21E-146 dispersed
Bma04g00134 Bma-Chr4:1077493 Bma09g00511 Bma-Chr9:41528078 1.44E-117 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00134 K16296 - tcc:18591952 616.305