Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00144 ATGGAAAACTATTTGACTGGGAATTTTGAGGAGGTGAAGCCGAAAAATTCATCGGAGGAAGCGCTGCGGAGATGGAGGAATTTATGTTGGCTGGTGAAAAATAAGAAGCGGAGGTTTCGCTTCACTGCGAATCTCCCCAAGCGCTCCGAGGCCCAGGATATCCGACGCTCGAATAAGGAGAATTTTAGAGTTGCAGTTCTTGTTTCACAAGCTGCCCTTCAATTTATTGATGGTTTGACTTTGCTGAGAGAATATACAGAACCTGAAGAGGTCAAAGCTGCCGGTTTCGGAATCGATGCTGAAGAATTGGCAACCATTGTCGATCGCCTGGATGTGAAGAAGCTTAAGATTCACGATGGAGTTGAGGGTATTGCAAAAAAGCTTTCTACATCACTGACGGACGGTATTTCTACTTCGGAGCAATCGATCAAGAAGAGAAAAGACATCTATGGAGTCAACATGTTCACTGAAATCCCACCTCGTGGTTTTTGGGTTTTTGTGTGGGAAGCCCTTCAGGATATGACTCTAATGATACTTGCAATTTGTGCAATTGTCTCTCTTCTTGTTGGCATAGCAATGGAAGGATGGCCTAAAGGCGCACACGATGGAGTCGGAATTGTTGCTAGCATTTTGCTGGTTGTATTTGTTACGGCTACCAGTGACTATAAACAATCTCTTCAGTTCAAAGATTTGGATAAGGAGAAGAAAAAAATAGCAATTCAGGTTACCAGAAATGGATACAGACAAAAGTTGTCAATATATGATCTACTTCCGGGTGATATTGTTCATCTAGCCATTGGAGATCAGGTACCGGCCGATGGACTTTTTGTCTCTGGATTTTCCGTTCTGATAAACGGATCCAGTTTGACCGGCGAGAGTGAACCAGTTAATGTGAATTGCGAAAACCCTTTTCTTCTCTCTGGAACAAAAGTTCAAGACGGATCATGCAAGATGCTTGTTACTTCGGTTGGAATGAAAACTCAATGGGGTAAATTAATGGCTACTCTGTGTGAAGGAGGAGATGATGAAACTCCATTGCAGGTCAAACTAAATGGAGTGGCAACAATAATCGGAAAAATCGGTCTGTTTTTCGCTGTTGTCACTTTTGCTGTTTTGGTGCAAGGATTGTTTAGCCATAAATTACAAGAAGGGTCTCAGTGGGTCTGGACTGCAGAAGATATGAGGGAAGTTTTGGAATTCTTCGCCATTGCTGTCACTATAGTAGTGGTTGCAGTTCCTGAAGGGCTTCCTCTGGCTGTGACATTAAGTCTCGCTTTCGCCATGAAGAAGATGATGAATGACAAGGCACTTGTCAGAAATCTCGCTGCCTGTGAAACGATGGGATCGGCTACTACTATTTGTAGTGACAAAACTGGGACGTTAACTACTAACCACATGACTGTTGTGAAAGCTTGTGTTTGCTTTAAAGTGAAGGAACTTAACAACTCAGAGGATGCTTCTAGTTACAGCTCAGAACTCCCGCAACCGAGTTTGAAACTTCTGCTTCAATCCATATTTAACAACACTGGAGGAGAAATCGTGAAGAACAAAAATGGTGAGCTTGAAATACTCGGGACTCCCACTGAGTCTGCTATTCTGGAATTCGGCCTGTCGCTCGGTGGAGATTTTCAAAACGAACGCCAAGTTGTTGAAATCGTGAGAGTCGAGCCTTTCAATTCTCTTAAGAAAAGAATGGGGATAGTTATTGAACTTTCAGAGGGTGGTTTCCGAGCACATTCGAAAGGCGCTTCCGAGATAGTCTTGGCTGCATGTGACAAAGTCTTGGACGAAAATGGCGAGGTTGTTCCTTTGAATGAAACATCCATGGATCTTTTGAAGAATACAATCGAACAATTTGCCAGTGAGGCTCTTCGAACTCTCTGTCTCGCATACATGGACGTTGGAAATGAGTACAATGCTGAGAGTTCAATGCCCGTGAATGGCTATACTTGCATAGGAATTGTGGGTATCAAAGATCCGGTCCGGCCTGGCGTCAAGGAATCCGTTGCAATTTGTAGGGCTGCTGGTATTGCTGTTAGGATGGTTACTGGAGATAATATAACCACTGCAAAGGCAATTGCTAGAGAGTGTGGAATTTTGACTGATGGTGGTATTGCCATCGAAGGTCCAGACTTCCGTGAGAAGAGCGAGGAAGAATTGCACAAAATAATCCCAAAAATTCAGGTCATGGCGAGGTCTTCACCAATGGATAAGCATACTCTTGTAAGACATCTTCGCACCACTTTTCAAGATGTTGTTGCAGTAACTGGCGATGGCACGAACGATGCCCCTGCTCTTCACGAAGCCGATATTGGACTTGCAATGGGAATTGCTGGGACTGAGGTCGCAAAAGAGAGCGCCGATGTGATAATTCTGGACGATAATTTCTCGACGATTGTGACCGTAGCCAAATGGGGACGATCAGTTTATGTTAATATTCAAAAGTTTGTTCAGTTTCAGTTGACAGTCAATGTCGTCGCACTTCTTGTCAATTTTTCTTCTGCTTGTTTGACAGGAAATGCTCCTCTCACAGCCGTTCAGCTTCTCTGGGTCAACATGATAATGGACACGCTCGGAGCACTTGCACTGGCCACCGAGCCTCCAAACGACAACCTGATGAAGAGATCACCAGTAGGCCGGAAAGGAAACTTCATCAACAATGTAATGTGGAGGAATATCTTAGGCCAATCTTTATACCAGTTTGTCATAATTTGGTGTCTACAAACAAGAGGAAAAGCCCTCTTCCGCCTCACCGGTCCAGACTCTGATTTGATCCTCAACACGCTCATTTTCAATTCGTTCGTCTTCTGTCAGGTTTTCAACGAGGTGAGCTCTAGAGAGATGGAGAAGATAAATGTGTTCAAAGGTTTACTGGAAAACTATGTCTTTGTAGGAGTGCTCACTTGCACTGCTGCATTCCAAATCATAATTATTCAGTTTCTGGGAACATTTGCGGGCACGGCTCCGTTAACTCTCCAGCAATGGATCATTTCTGTCTTCCTTGGATTCCTCGGCATGCCGATTGCAGTAGCTTTGAAGATGATCCCTGTCGGATCAAAC 3060 44.05 MENYLTGNFEEVKPKNSSEEALRRWRNLCWLVKNKKRRFRFTANLPKRSEAQDIRRSNKENFRVAVLVSQAALQFIDGLTLLREYTEPEEVKAAGFGIDAEELATIVDRLDVKKLKIHDGVEGIAKKLSTSLTDGISTSEQSIKKRKDIYGVNMFTEIPPRGFWVFVWEALQDMTLMILAICAIVSLLVGIAMEGWPKGAHDGVGIVASILLVVFVTATSDYKQSLQFKDLDKEKKKIAIQVTRNGYRQKLSIYDLLPGDIVHLAIGDQVPADGLFVSGFSVLINGSSLTGESEPVNVNCENPFLLSGTKVQDGSCKMLVTSVGMKTQWGKLMATLCEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSHKLQEGSQWVWTAEDMREVLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACVCFKVKELNNSEDASSYSSELPQPSLKLLLQSIFNNTGGEIVKNKNGELEILGTPTESAILEFGLSLGGDFQNERQVVEIVRVEPFNSLKKRMGIVIELSEGGFRAHSKGASEIVLAACDKVLDENGEVVPLNETSMDLLKNTIEQFASEALRTLCLAYMDVGNEYNAESSMPVNGYTCIGIVGIKDPVRPGVKESVAICRAAGIAVRMVTGDNITTAKAIARECGILTDGGIAIEGPDFREKSEEELHKIIPKIQVMARSSPMDKHTLVRHLRTTFQDVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDNLMKRSPVGRKGNFINNVMWRNILGQSLYQFVIIWCLQTRGKALFRLTGPDSDLILNTLIFNSFVFCQVFNEVSSREMEKINVFKGLLENYVFVGVLTCTAAFQIIIIQFLGTFAGTAPLTLQQWIISVFLGFLGMPIAVALKMIPVGSN 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1235599 1239621 + Bma031091 Bma04g00144 80513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00144 1020 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 50 IPR024750 GO:0005516
Bma04g00144 1020 Gene3D - 464 660 IPR023299 GO:0000166
Bma04g00144 1020 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00144 1020 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00144 1020 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00144 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1016 IPR023298 -
Bma04g00144 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 722 837 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00144 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 485 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma04g00144 1020 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Bma04g00144 1020 Gene3D - 451 801 IPR023214 -
Bma04g00144 1020 CDD P-type_ATPase_Ca_PMCA-like 145 889 - -
Bma04g00144 1020 Pfam Cation transport ATPase (P-type) 515 594 - -
Bma04g00144 1020 SFLD C1.7: P-type atpase like 436 808 - -
Bma04g00144 1020 Pfam E1-E2 ATPase 239 432 - -
Bma04g00144 1020 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 94 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bma04g00144 1020 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1017 - -
Bma04g00144 1020 Pfam Cation transporting ATPase, C-terminus 841 1014 IPR006068 -
Bma04g00144 1020 Gene3D - 139 337 - -
Bma04g00144 1020 Gene3D - 169 1014 - -
Bma04g00144 1020 SFLD p-type atpase 436 808 IPR044492 -
Bma04g00144 1020 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Bma04g00144 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 665 IPR023299 GO:0000166
Bma04g00144 1020 Gene3D - 17 77 - -
Bma04g00144 1020 PANTHER CATION TRANSPORTING ATPASE 3 1017 - -
Bma04g00144 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Bma04g00144 1020 SUPERFAMILY HAD-like 452 861 IPR036412 -
Bma04g00144 1020 SMART Cation_ATPase_N_a_2 114 191 IPR004014 -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Bma04g00144 1020 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02247 Bma04g00144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00144 Bma-Chr4:1235599 Bma06g00346 Bma-Chr6:7696879 0 dispersed
Bma06g00464 Bma-Chr6:20620533 Bma04g00144 Bma-Chr4:1235599 1.50E-21 transposed
Bma06g01032 Bma-Chr6:47128388 Bma04g00144 Bma-Chr4:1235599 0 transposed
Bma13g01184 Bma-Chr13:45120643 Bma04g00144 Bma-Chr4:1235599 0 transposed
Bma01g02247 Bma-Chr1:79646522 Bma04g00144 Bma-Chr4:1235599 0 wgd
Bma04g00144 Bma-Chr4:1235599 Bma05g00029 Bma-Chr5:1921296 4.72E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00144 K01537 - zju:107420566 1675.99