Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00152 ATGGCTCGGTATCCTTCCGATTCTGCATTTCTTTTTGAATCATTGTATTGCTCAGAAGAGCATTGGGAAGACGAAACAACGGAGGTCAATTTTGAGAAGAATGAAGTTGGGAGAAGCCATTACTGTGATTTAAGTATTACCCAGAAACCGAAAACCTTGTTGGAGCAAGATCTATTATGGGAAGAAGACGAGTTGATCTCTCTACTGTCGAAAGAAAACCCGAACAGACTCCATAAAAACCTACTCGCCGACCCATGTCTCGCCGGAGCCAGAAGAAACGCCGTCAAATGGATGCTCAGAGTCACTACCCACCATTGTTTTTCTGCACTCACCGCCGTTCTCTCCGTTGATTATCTCGACAGGTTTCTCTGCAGCTTTCACTTTCAGAAAGAGAGTCCATGGATGATCCAGCTGGCTGCAGTGGCTTGTATCTCTTTGGCTGCGAAAGTCGAGGAAACTCACGTTCCGCTTTTTCTGGATCTGCAGGTGGACGAGAGTAGCTACTTATTTAAAGCTGAAATGATTAAGAAAATGGAGATTCTGGTTCTCTCATCTCTTCAATGGAGAATGTATCCCGTTACTGCACTTTCCTTTCTAGATTTCATAACGCGAAAGCTTGGATTAAGGGATCATCTCTGTTTCGAATTTATCCGGCGGTCTGAGCAAATACTTCTCTCTCTTATTACAGGTAAAAATGAACAAATTTGA 708 43.36 MARYPSDSAFLFESLYCSEEHWEDETTEVNFEKNEVGRSHYCDLSITQKPKTLLEQDLLWEEDELISLLSKENPNRLHKNLLADPCLAGARRNAVKWMLRVTTHHCFSALTAVLSVDYLDRFLCSFHFQKESPWMIQLAAVACISLAAKVEETHVPLFLDLQVDESSYLFKAEMIKKMEILVLSSLQWRMYPVTALSFLDFITRKLGLRDHLCFEFIRRSEQILLSLITGKNEQI 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1320268 1321061 - Bma018597.1 Bma04g00152 80521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00152 235 SUPERFAMILY Cyclin-like 59 190 IPR036915 -
Bma04g00152 235 Gene3D - 84 191 - -
Bma04g00152 235 Gene3D - 192 227 - -
Bma04g00152 235 SMART cyclin_7 96 184 IPR013763 -
Bma04g00152 235 PANTHER CYCLINS 45 228 IPR039361 -
Bma04g00152 235 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Bma04g00152 235 Pfam Cyclin, N-terminal domain 89 191 IPR006671 -
Bma04g00152 235 PANTHER CYCLIN D3.1 PROTEIN 45 228 - -
Bma04g00152 235 Coils Coil 228 235 - -
Bma04g00152 235 CDD CYCLIN 91 183 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00666 Bma04g00152 CCT
Bma01g00666 Bma04g00152 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00152 Bma-Chr4:1320268 Bma13g00837 Bma-Chr13:35233530 1.58E-104 dispersed
Bma01g00471 Bma-Chr1:3888163 Bma04g00152 Bma-Chr4:1320268 7.39E-167 transposed
Bma11g00221 Bma-Chr11:1983533 Bma04g00152 Bma-Chr4:1320268 2.05E-103 transposed
Bma11g00604 Bma-Chr11:9019130 Bma04g00152 Bma-Chr4:1320268 6.04E-165 transposed
Bma01g02262 Bma-Chr1:79793390 Bma04g00152 Bma-Chr4:1320268 5.07E-67 wgd
Bma01g00666 Bma-Chr1:6073282 Bma04g00152 Bma-Chr4:1320268 1.48E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00152 K14505 - zju:107419965 267.314