Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00155 ATGGCTGTGGAGCTCATGTTGGGTTTTGGTTGCGGCGGTTTCTCTGCAAAAATGGACGAGTGTTCGACTGTCTCCGCCGTACAAGAGGCGGCCTCTGCGGGTATTCAGGGGGTTGAGAGTTTTCTTAGATTGATGTCTGATGGCTCCAATACGCAGTTTCAGGAGCCTTCTTCGAGTACGAGCGCTGACGCTGTTGCAGACATGGTGGTCGATAAGTTCAAGAAGGTTATTTCGTTACTGGATCGGAACAGAACTGGCCACGCTCGCTTCCGAAGGGCTACATCGGGGCCTCCGCCACAGCAGCGGCAGCCTGCGGAACAAGCTTCTGCTTTTAGAGCCTATTCTCGCACACCGGTGGGGCGTTTACCTCCTCTGCCTCACGTTCCGCCCACTTTCCAATCTCGGATAAACTCTTCTCCCATGACGGCAAAGAACGGGTCCGCCGAGGGAAAGGAAACGACTGTGACCACCATTACTTTTTCTCCTTCGCCGCCCGTTTCTGCGGCAAATTCGTTTATTTCGTCGCTAACGGGGGATTCTGAGAGTTTGCAACCTTCTTTATCCTCTGGGTTCCATTTAACCACGTCTACCGGAAAACCTCCTCTCTCTTCGTCTTTGATGAAGAGGAAGTGCAACTCTATGGATGATCCAGCTCTTAAATGTGGCTCGCCTTCTTCGCGATGCCATTGTTCGAAGAAAAGAAAAACCCGAATAAAGAGAGTGGTTAGAGTTCCTGCCGTCAGCCTGAAAATGGCAGATATTCCAGCCGACGATTATTCCTGGAGGAAGTACGGCCAAAAACCCATCAAAGGCTCTCCTCATCCAAGGGGGTACTACAAGTGTAGTAGTCTGAGAGGATGCCCAGCGAGGAAACACGTGGAGCGCGCCGTAGACGATCCAGCGATGTTGATCATAACATACGAGAACGACCACAATCATGTCCACTCTATCACGGAAACAACGGCAGCAAATGCCCTTGAATCATCATAA 990 51.21 MAVELMLGFGCGGFSAKMDECSTVSAVQEAASAGIQGVESFLRLMSDGSNTQFQEPSSSTSADAVADMVVDKFKKVISLLDRNRTGHARFRRATSGPPPQQRQPAEQASAFRAYSRTPVGRLPPLPHVPPTFQSRINSSPMTAKNGSAEGKETTVTTITFSPSPPVSAANSFISSLTGDSESLQPSLSSGFHLTTSTGKPPLSSSLMKRKCNSMDDPALKCGSPSSRCHCSKKRKTRIKRVVRVPAVSLKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARKHVERAVDDPAMLIITYENDHNHVHSITETTAANALESS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1345202 1346380 + Bma018600.6 Bma04g00155 80524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00155 329 SUPERFAMILY WRKY DNA-binding domain 252 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma04g00155 329 Pfam Plant zinc cluster domain 208 253 IPR018872 -
Bma04g00155 329 MobiDBLite consensus disorder prediction 131 151 - -
Bma04g00155 329 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 19 329 - -
Bma04g00155 329 Gene3D WRKY domain 241 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma04g00155 329 ProSiteProfiles WRKY domain profile. 250 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma04g00155 329 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 329 IPR044810 GO:0003700
Bma04g00155 329 MobiDBLite consensus disorder prediction 87 151 - -
Bma04g00155 329 MobiDBLite consensus disorder prediction 96 110 - -
Bma04g00155 329 Pfam WRKY DNA -binding domain 257 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma04g00155 329 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02264 Bma04g00155 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00155 Bma-Chr4:1345202 Bma09g00258 Bma-Chr9:13682400 1.26E-107 dispersed
Bma01g02264 Bma-Chr1:79806697 Bma04g00155 Bma-Chr4:1345202 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57112 PF03106 WRKY 4.00E-25 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00155 - - cmo:103493562 420.239