Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00163 ATGAACTTCAAGAATTTTGGGTATACTCCGCCTGCTGAAAACAGCTATTCAAGTGGTGGAAGATTGCTGGGGGATTTTCCGTTGACAAAACAATTGTCGATCTATTCGCTGACGATTGATGAATTACAGAGCACCTTGGGAGGAGGGATGGAGAAGGACTTTGGTTCCATGAATATGGATGAGCTATTAAAGAATATTTGGAGTGCCGAAGAGACACAACCCATGGTATCGTGTAGCACTGCAGCTGCACAACAAGGTTGTGGGAATTCTAGTGTGTATTTACAAAAGCAAGGCTCCTTGACACTGCCTCGAACACTCAGCCAGAAGACGGTGGAAGAGGTGTGGAGGGATTTATCAAAAGTAGATGATTTAGGGAAAGGCGGAAATGGTGGTGTTTTGTCTAATGATATTCCACAGAGACAACAAACCTTGGGGGAGATGACTTTGGAAGAGTTCTTGTACAAAGCTGGTGTTGTGAGAGAGGACAACCATTTTACAGAAAAGACTAATAATAATGGTGGATTTTTTGGCAACGGAAATTGTTCAGGAATCGATTTTCAGAAGCCAGATTCGAACAAACTATTAGTAGGTAATAGAATTGCAGATACCAACAGTCAAATGTCAATTCTGTCTTCAAATTTACCTTTAAATGTTAATGGGGTTAGAACGAATCATCAACAACAGAAGATTTTCCCCAAACAACCTACTGTAACATATGGACAACTGCCTTTATCAAGTAGTGGTGCTCAGTGGGAAAATCCAAGAGAGGCAATTGCAAATTTTGCAGATCACGGCTTGAATTCCGCTGCAAGCCAAATGTCTACCGTGCAAAGTGGAGGTACAGGAGTGATTGGCTTAAAAGGTGGGCATGTTAATGTTGAAAGAGTATCTCCAGGAAACCAAGTTTTATCAGATGGAATTCGGAAGAGTAATGGCGATATCTCTTCCATCTCATCCGTACCTTACATGTTTAATGGCGGAGTAAGAGGGAGGAGGTCAAGTGGGACAGTGGAGAAGGCTGCAGAGAGGAGACACAAGAGAATGATTAAAAACAGAGAATCTGCAGCAAGGTCTCGAGCCCGCAAGCAGGCTTACACAACGGAACTGGAAGCTGAAGTTGCAAATCTGAAGGAGGAGAACGGAGCATTGCAGAAAAAACAGGTGCTTTAG 1170 42.82 MNFKNFGYTPPAENSYSSGGRLLGDFPLTKQLSIYSLTIDELQSTLGGGMEKDFGSMNMDELLKNIWSAEETQPMVSCSTAAAQQGCGNSSVYLQKQGSLTLPRTLSQKTVEEVWRDLSKVDDLGKGGNGGVLSNDIPQRQQTLGEMTLEEFLYKAGVVREDNHFTEKTNNNGGFFGNGNCSGIDFQKPDSNKLLVGNRIADTNSQMSILSSNLPLNVNGVRTNHQQQKIFPKQPTVTYGQLPLSSSGAQWENPREAIANFADHGLNSAASQMSTVQSGGTGVIGLKGGHVNVERVSPGNQVLSDGIRKSNGDISSISSVPYMFNGGVRGRRSSGTVEKAAERRHKRMIKNRESAARSRARKQAYTTELEAEVANLKEENGALQKKQVL 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1410423 1411977 - Bma018609.3 Bma04g00163 80532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00163 389 SMART brlzneu 339 388 IPR004827 GO:0003700|GO:0006355
Bma04g00163 389 Gene3D - 341 388 - -
Bma04g00163 389 SUPERFAMILY Leucine zipper domain 343 386 IPR046347 GO:0003700|GO:0006355
Bma04g00163 389 Pfam bZIP transcription factor 341 386 IPR004827 GO:0003700|GO:0006355
Bma04g00163 389 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 346 361 IPR004827 GO:0003700|GO:0006355
Bma04g00163 389 Coils Coil 359 386 - -
Bma04g00163 389 CDD bZIP_plant_BZIP46 343 389 - -
Bma04g00163 389 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 15 387 - -
Bma04g00163 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 341 386 IPR004827 GO:0003700|GO:0006355
Bma04g00163 389 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 387 IPR043452 GO:0003700|GO:0045893
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02274 Bma04g00163 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02233 Bma-Chr1:79375887 Bma04g00163 Bma-Chr4:1410423 0 dispersed
Bma03g00516 Bma-Chr3:4008581 Bma04g00163 Bma-Chr4:1410423 9.85E-68 dispersed
Bma04g00163 Bma-Chr4:1410423 Bma08g00802 Bma-Chr8:45625488 4.65E-53 dispersed
Bma09g00176 Bma-Chr9:6528742 Bma04g00163 Bma-Chr4:1410423 2.14E-06 dispersed
Bma05g01395 Bma-Chr5:53358736 Bma04g00163 Bma-Chr4:1410423 9.60E-14 transposed
Bma01g02274 Bma-Chr1:79881660 Bma04g00163 Bma-Chr4:1410423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57115 PF00170 bZIP_1 2.00E-12 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00163 K14432 - jre:118343674 391.734