Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00189 ATGGATCTCTCTCTTAATCTCACTCTGACTGCTCTTTTGTTCCCTCTGCTTCTTTTCTATTATGTTTTGAATTCTAAAACCAAGAGTAAGAGCTCGGAGGCTCCAGAGCCCAATGGGGCGTGGCCTATTATTGGCCATCTCCACCTTCTTGCCGGCGGAGATCAGCTTCTCTACCGCACGCTTGGAGCCCTGGCTGACAAGTATGGCCCAACTTTTAATATCCGCCTGGGCAGCCGCCGTGCATTTGTTGTTAATAGCTGGGAAGTGGCCAAAGACTGTTTCACTGTCAATGACAAGGCGCTCGCTTCACGCCCAACCACAGTGGCTTCAAAGCTTATGGGTTACAACCATGCTATTTTCGGGTTTGCGCCATATAATGCATTTTGGCGTGGGATGAGAAAGATTGCCACTCTTGAACTTCTATCAAATCGCAGGCTCGAATTGCTCAAGCATATCAGAGCTTCTGAAATTGACACCGGGCTGAGAGATCTGTACAATTTATGCGTCCAGAATGGGTCAGAGCCTACGGCCGTGGAGTTTAAAAGTTGGTTAAGTGACTTGACACTTAATGTGGTGGTTCAGATGGTGGCAGGGAAGCGATATTTCGGTTCCTCGGCTGATGTCGCCGGCGATGAGGGGAGACGGTGCCAAAAGGCAATCAGTCAATTCTTTCATCTGATCGGAATATTTGTCGTTTCAGATGCGATTCCATCTCTGGGATGGCTCGATTTTAATGGCCATGAGAAGGCCATGAAGACGACAGCCAAAGAGCTCGACGCAATACTTGAAGGGTGGCTGGAGGATCATCGCCGAAGAAGGAGGGAGTCTCGTGAGGTCAATTCCGACGGCGATCAGGACTTCATTGACGTGATGTTATCTCTTCAGAAGGAAGGGAAGCTCTCAGATTTTGAGCACGATTCAGATACTTGTGTCAAGTCTACTTGCCTGGCACTCATTCTTGGCGGCAGCGACACCACATCAGGCACACTCACATGGGCTATCTCATTGCTCCTCAACAATCGTCATCTGTTGGAAAAGGCGAAACAAGAGCTTCAAACTCACGTTGGCGAAGACCGGAAAGTTGAAGATTCGGACGTAAAAAACCTAGTCTATCTCCAAGCTATCATCAAAGAAACGCTGAGATTATACCCGGCGGGTCCGCTCTTAGGACCAAGGGAAGCCATGGAAGACTGTAAAGTAGCAGGGTACAACGTGAAGGCAGGGACTAGACTGGTGGTAAATGTATGGAAGATTCAAAGGGATCCAAGGGTTTGGGAGAAACCCAGTGAGTTCATTCCAGAAAGATTTTTAACAACCCATGAGAGCGTGGACGTAAAGGGTCAACATTTCGAGCTGATGCCGTTCGGGTCAGGAAGAAGGTCTTGTCCTGGTTCAACGTTTGCACTGCAAGTCCTGCACTTGACTCTTGCCCGTCTGCTTCATGCTTTTGAATTCACAACTCCATCGAAGGAGGCTGTTGACATGACAGAGAGCCCTGGTTTGACGATTCCAAAAGCCACTCCTCTGGATGTTCTGCTGACTCTCCGCCCAGCTGCAAAACTCTACGGTGGCCGATGA 1578 48.99 MDLSLNLTLTALLFPLLLFYYVLNSKTKSKSSEAPEPNGAWPIIGHLHLLAGGDQLLYRTLGALADKYGPTFNIRLGSRRAFVVNSWEVAKDCFTVNDKALASRPTTVASKLMGYNHAIFGFAPYNAFWRGMRKIATLELLSNRRLELLKHIRASEIDTGLRDLYNLCVQNGSEPTAVEFKSWLSDLTLNVVVQMVAGKRYFGSSADVAGDEGRRCQKAISQFFHLIGIFVVSDAIPSLGWLDFNGHEKAMKTTAKELDAILEGWLEDHRRRRRESREVNSDGDQDFIDVMLSLQKEGKLSDFEHDSDTCVKSTCLALILGGSDTTSGTLTWAISLLLNNRHLLEKAKQELQTHVGEDRKVEDSDVKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCKVAGYNVKAGTRLVVNVWKIQRDPRVWEKPSEFIPERFLTTHESVDVKGQHFELMPFGSGRRSCPGSTFALQVLHLTLARLLHAFEFTTPSKEAVDMTESPGLTIPKATPLDVLLTLRPAAKLYGGR 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1673216 1674879 - Bma018638.1 Bma04g00189 80558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00189 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PANTHER STEROID 21-HYDROXYLASE-RELATED 9 519 - -
Bma04g00189 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Bma04g00189 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 SUPERFAMILY Cytochrome P450 35 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 Pfam Cytochrome P450 35 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00189 525 PANTHER CYTOCHROME P450 CYP82D47-LIKE 9 519 - -
Bma04g00189 525 Gene3D Cytochrome P450 20 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00189 Bma-Chr4:1673216 Bma04g00185 Bma-Chr4:1573005 5.55E-72 dispersed
Bma09g00251 Bma-Chr9:12128728 Bma04g00189 Bma-Chr4:1673216 2.31E-105 dispersed
Bma04g00188 Bma-Chr4:1642580 Bma04g00189 Bma-Chr4:1673216 8.39E-167 tandem
Bma04g00189 Bma-Chr4:1673216 Bma04g00190 Bma-Chr4:1677943 1.10E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00189 K23136 - qsu:112004233 785.023