Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00192 ATGCCTAACGAATTAGGTGCTAGTTTTAGGAAATTTCATGCCGCCAAAACATCGTCGGAAAAGGTTATTGTTGCCGTGAAAGCTGAGAGAGCGATGTCCAAATCTGCACTAGCTTGGGCGCTCGCTCACGTTGTTCGTCCCGGAGATTGTGTTATTTTTCTCGCTGTGTTCTCCATTGATAAAACTGGGAGGAGATTCTTAAACTTTCCTTTATGGGCCGGAGATTGTGGAAGCGGCGGACCGGAGGAGCTGCCGGATCGGATTTGTGAGATCTCAGAATCCTGTTCGCAGATGGTGCTTCAGTTTAGTAGCCAAGTAGAGATCAAAGTGAGGATTAAGGTCGTATCAAGTTCATGTAGGGGTGCTGTTGCGGCTGAGGCAAAGACCAACAAAGTCAACTGGGTCATACTGGACAAAAAACTAAAGCAGGAGGTGAAGTACTGCATTGAAGATCTAAGCTGCAATATTGTAACAATGAAGGGATCTGAACCACAAATTTTAAGGCTTAATTTGGGATGCTCAAATGAACCATCAACTCCCTTCTTTTCTGCTCTTTCTTCGCCAGGTGTGGATATAGCAAAGATACCATCACAGAGGATGAACCAGTCTACACCAGCAAGCAGCCCAGATGAACCTAGTACTTCAGATACAAGAACCTCAAGGGAAGATTCTTTGTCTAGCTTCGACACAATTAATTCTCCTTACCTGCTGTATGAGGAAAATCCTCTGTTTGAAGGATATTTCGGACGAAAATACTCAGCCATTGAGAAATACGAAGATACAAGTAAGTCACTAAACCCACCAAACTCAATTGGTGAAAAAGTGATCTCCCTGTCCGCTGCCCCAACATCAGTCATATCTGCTAGGCAGAAAAGTGCTTACTATATCCCTCAGAACCATATTATCAATGGAGCTAAACCTTCACAAGGTCAACATGTGTCACCTTCACAAGGTCAACATGTGTCCGAGAGTAATGAAGGTGTTTTTCTCAACCATCCCTATAGCAAAGATGAAATGAACTCCAACATCAGGGATGCTGTCTCCTTAGGTAAAATATCCTCAATACCCCCACCCTTATGCTCTATATGTCAACACAAAACTCCAGCTTTTGGTAAACCTCCGAGAAAATTCTCTTACAAAGAGCTACTGCTAGCTACAGACGGGTTCTCAAACTTAAATTTCTTGGCCAAAGGTGGTTTTGGCATTGTGTACAGAGGGGTATTGAGGGATGGCCAGGTTGTAGCAGTGAAGCAGTTGAAGTGTGAAGGTTTTCAAGCAGAAACTGATTTCTGTAGGGAAGTACGGGTTTTAAGCTGTGCGCAACATAGAAATGTTGTATTGCTAATTGGGTTTTGCATTGAGAGCACGACAAGGCTATTGGTATACGAATACATATGCAATCATTCCTTGGACTTCCATTTACATGAATCAAGAACCCGTTTAGATTGGCAGTCACGGGTTAGGATTGCAATAGGTGCCGCTCGTGGCTTAAGATACCTTCATGAAGATTGTAGAGTGGGTTGTATTGTGCACAAAGACTTTCGACCCAAGAATATACTCCTGACACACGATTTTGAACCGCTGATTACTGATTTTGGGCTAGCCAGACAGCACTCTGAATGGACCATGAATGAAGATGATAGAGTGATTGGAACGTCAGGGTATCTTGCTCCAGAGTACATCAATGGTGGAATGATTTCACACAAAGTTGATGTGTACGCATTTGGAGTAGTTTTATTGGAACTTATAACGGGTCGAAGAATCAGCGAGCTTAAAAGTTTGGAGGGAAAGCTATTCACATATGATTGCTATCAACCTCTATCTGCTTCACGAATGAACGATTTACTTGGAAATGGTTACCAATTTCTGGATTCGAACTTGATCTCTGACCAGCCCCCTGATTTCCCTCATCAACTACAGGCTATGACCCAAGCTGCTTCCATGTGTTTACGTCAAGATCCAGAATTGAGACCACCAATGTCTAAGATTCTTAGAGTGTTAGAAGGAGGAGATCCAACTATTGCTCTTGGTTTAGACTTGGATTCAGTTGGATGTAGGAGTGGCCATTTGAGAGGTCCCCCCTCCTCTGCGAGAATTGAAGCAAAAAGAAGCCATTCTCGCAAGCTGTCCCACTAG 2136 43.4 MPNELGASFRKFHAAKTSSEKVIVAVKAERAMSKSALAWALAHVVRPGDCVIFLAVFSIDKTGRRFLNFPLWAGDCGSGGPEELPDRICEISESCSQMVLQFSSQVEIKVRIKVVSSSCRGAVAAEAKTNKVNWVILDKKLKQEVKYCIEDLSCNIVTMKGSEPQILRLNLGCSNEPSTPFFSALSSPGVDIAKIPSQRMNQSTPASSPDEPSTSDTRTSREDSLSSFDTINSPYLLYEENPLFEGYFGRKYSAIEKYEDTSKSLNPPNSIGEKVISLSAAPTSVISARQKSAYYIPQNHIINGAKPSQGQHVSPSQGQHVSESNEGVFLNHPYSKDEMNSNIRDAVSLGKISSIPPPLCSICQHKTPAFGKPPRKFSYKELLLATDGFSNLNFLAKGGFGIVYRGVLRDGQVVAVKQLKCEGFQAETDFCREVRVLSCAQHRNVVLLIGFCIESTTRLLVYEYICNHSLDFHLHESRTRLDWQSRVRIAIGAARGLRYLHEDCRVGCIVHKDFRPKNILLTHDFEPLITDFGLARQHSEWTMNEDDRVIGTSGYLAPEYINGGMISHKVDVYAFGVVLLELITGRRISELKSLEGKLFTYDCYQPLSASRMNDLLGNGYQFLDSNLISDQPPDFPHQLQAMTQAASMCLRQDPELRPPMSKILRVLEGGDPTIALGLDLDSVGCRSGHLRGPPSSARIEAKRSHSRKLSH 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1714569 1718507 + Bma018641.1 Bma04g00192 80561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00192 711 ProSiteProfiles Protein kinase domain profile. 389 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00192 711 PANTHER OS01G0253100 PROTEIN 17 699 IPR045271 GO:0004714|GO:0006468
Bma04g00192 711 ProSitePatterns Tyrosine protein kinases specific active-site signature. 509 521 IPR008266 GO:0004672|GO:0006468
Bma04g00192 711 MobiDBLite consensus disorder prediction 198 226 - -
Bma04g00192 711 Pfam Protein tyrosine and serine/threonine kinase 394 666 IPR001245 GO:0004672|GO:0006468
Bma04g00192 711 SUPERFAMILY Protein kinase-like (PK-like) 370 667 IPR011009 -
Bma04g00192 711 Gene3D Phosphorylase Kinase; domain 1 360 464 - -
Bma04g00192 711 Gene3D Transferase(Phosphotransferase) domain 1 466 673 - -
Bma04g00192 711 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 699 - -
Bma04g00192 711 MobiDBLite consensus disorder prediction 687 711 - -
Bma04g00192 711 CDD STKc_IRAK 395 669 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00192 Bma-Chr4:1714569 Bma10g00758 Bma-Chr10:12142001 7.72E-163 dispersed
Bma04g00192 Bma-Chr4:1714569 Bma13g01236 Bma-Chr13:45626188 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66432 PF07714 PK_Tyr_Ser-Thr 3.40E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00192 - - mcha:111009747 847.81