Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00194 ATGGCGTCCAATTTTTTACCTGTTTCGTCTCCCAGGCCCTCTTTACACTCGCCGCATCATATGTCTAAACTTTCTTACCGCCGCTTGATTGTCTGTCCAATTTCTGCGTCTGCGCCCGACCGTTTTTCTGTGGCTGCTCCTACGACGGCCGGTTCTCAGTCCAAACCCACTCAACTTCCCCTCAGAGATTTGCCCGGAGGTTATGGCCTTCCTTTTTTCGGTGCTATTCAAGATCGGTTGGATTACTTCTACAGGCAAGGAACAGTTGAGTTTTTCAGATCGCGAGTACAGAAGTATGAATCTACAGTTTACAAAGTTAATATGCCTCCTGGTCCATTCATCGCAGCCAATCCCCGCGTCGTCGCCGTACTCGACGGAAAGAGCTTTCCAGTGCTTTTCGACGTCTCCAAGGTTGAAAAGAAAGACGTCTTCACCGGCACGTACATGCCCTCCACTGAATTAACCGGAGGTTACAGAGTTCTTTCCTATCTCGACCCATCGGAGCCAAATCACGCAAAGCTAAAAAATCTGCTATTCTTCCTTCTCAAATCTGCTCGGGATCGAATCATTCCAGAATTCCATTCGCGTTTTTCAGAGCTTTTTGAGACGATCGAAAGCACAGTCAAATCCGAAGGGAAGGCAAGTTTCACCGACCCTAACGATCAAGCTTGCTTCGACTTCTTGGGCCGCGCGTTTTACGGCGCAGATCCAGCTCAGACCAAACTCGGCAAAGACGGTCCGAAGTTTATTACACTATGGGTGTTCTTTCAGCTCGCTCCCATTCTCACCGTAGGCCTGCCCCCTGTTTTGGAAGACCCCCTTATCCACACTTTCAGTCTTCCTCCATTCATCGTCAAAGGCTTCTATCAGAAATTATACGACTTCTTTTACGAATTCTCCGGCCCTATTCAAGAAGAAGCTGTCCGGTTAGGACTTTCCAAAGAAGAAGCTTGTCATAATCTTCTCTTCGCCACCTGTTTCAATTCATTCGGTGGAATGAAAATCTTCTTCCCCAGTATAGTGAAATGGGTCGGAAAGGCTGGGGCTACCCTGCAAAATAAGCTCGCAAGTGAAATCCAGTCGGTCGTCAAATCAAACGACGGAAAATTAACGATGGCGGCGATGGAACAGATGCCATTGATGAAATCCGCCGTCTACGAAGTCTTCCGAATCGACCCGCCGGTACCATTTCAGTACGGTAAGGCCAAACGAGATCTGATAATCGAAAACCACGAGTCATCGTTTGAAGTCAAGAAGGGGGAGATGATATTCGGGTACCAGCCGTTTGCGACAAAAGATCCGAAAATATTCGACAGACCCGAAGAGTTCGTGGCGGATCGTTTTGTCGGGGAGGGGGAGAAGCTATTAAAACACGTGCTCTGGTCGAACGGACCGGAGACGGAGAACCCTACCCTCGAGAACAAGCAGTGCGCCGGGAAAGACTTCGTGGTGATGGTGTCCAGGCTGTTCTTAGTGGAGCTGTTTTTGCAGTACGACTCCTTTGAGGTTGACGTCAGCTCGTCAACGCTTGGAGTGTCGGTAGAGGTGACTTCTGTTAAGAGAGCCTCTTCTTAA 1575 48.89 MASNFLPVSSPRPSLHSPHHMSKLSYRRLIVCPISASAPDRFSVAAPTTAGSQSKPTQLPLRDLPGGYGLPFFGAIQDRLDYFYRQGTVEFFRSRVQKYESTVYKVNMPPGPFIAANPRVVAVLDGKSFPVLFDVSKVEKKDVFTGTYMPSTELTGGYRVLSYLDPSEPNHAKLKNLLFFLLKSARDRIIPEFHSRFSELFETIESTVKSEGKASFTDPNDQACFDFLGRAFYGADPAQTKLGKDGPKFITLWVFFQLAPILTVGLPPVLEDPLIHTFSLPPFIVKGFYQKLYDFFYEFSGPIQEEAVRLGLSKEEACHNLLFATCFNSFGGMKIFFPSIVKWVGKAGATLQNKLASEIQSVVKSNDGKLTMAAMEQMPLMKSAVYEVFRIDPPVPFQYGKAKRDLIIENHESSFEVKKGEMIFGYQPFATKDPKIFDRPEEFVADRFVGEGEKLLKHVLWSNGPETENPTLENKQCAGKDFVVMVSRLFLVELFLQYDSFEVDVSSSTLGVSVEVTSVKRASS 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1721137 1722711 - Bma018643.1 Bma04g00194 80563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00194 524 PRINTS E-class P450 group IV signature 378 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 PRINTS E-class P450 group IV signature 415 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 PRINTS E-class P450 group IV signature 477 495 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 42 522 - -
Bma04g00194 524 SUPERFAMILY Cytochrome P450 58 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 PANTHER CYTOCHROME P450 26 42 522 - -
Bma04g00194 524 Pfam Cytochrome P450 351 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g00194 524 Gene3D Cytochrome P450 55 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02295 Bma04g00194 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02295 Bma-Chr1:80326087 Bma04g00194 Bma-Chr4:1721137 0 dispersed
Bma04g00194 Bma-Chr4:1721137 Bma05g00086 Bma-Chr5:2863811 5.66E-30 dispersed
Bma03g00694 Bma-Chr3:5866632 Bma04g00194 Bma-Chr4:1721137 6.93E-119 transposed
Bma01g02294 Bma-Chr1:80302393 Bma04g00194 Bma-Chr4:1721137 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00194 K01723 - zju:107420290 741.495