Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00198 ATGCGGCCATCTTTTCTGCTGGTCATGCCTTTACAAATGGCTCCATATTCACTCTCATTCCATGAATGCCCAGTTTGCAAGGCCCTCGTAGAAGAGGAGAAGTTGGTTCCATTATACGGTAAAGGAAAGACATCTACTGACCCGAGAGCAAAATCGATTCCCGGAATTATTCCGAATCGCCCTGCAGGACAAAGACCTGAAAGAGCTCCTCCACCAGAAGGAGCTCACTTTCCTCGTCATGAGTTTGGATCCATGGGAGGAGGATTCACATTTTCAGCAGCTTTTGGTGGTCTTGTCCCACCTTTGTTCAACCTTCATTTGCATGGCTTCCCTGATCCTGCAATGTATGTTCCAGCTGCTAATTTTTCTCACGGATTTTCTAATTTCTTTCACGAAGGCGTTCCGAATCGATACCATAATCACACGCGGCAAGGGCGACAGGATTTTTTTCTGAAGAGGCTGCTGTTTATCATAGGATTTTGTGCTCTTCTTGCATTTATCTGGCAATAG 510 45.69 MRPSFLLVMPLQMAPYSLSFHECPVCKALVEEEKLVPLYGKGKTSTDPRAKSIPGIIPNRPAGQRPERAPPPEGAHFPRHEFGSMGGGFTFSAAFGGLVPPLFNLHLHGFPDPAMYVPAANFSHGFSNFFHEGVPNRYHNHTRQGRQDFFLKRLLFIIGFCALLAFIWQ 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1756226 1756735 - Bma018647.1 Bma04g00198 80567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00198 169 MobiDBLite consensus disorder prediction 41 71 - -
Bma04g00198 169 PANTHER OS12G0636000 PROTEIN 21 169 - -
Bma04g00198 169 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 21 169 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02302 Bma04g00198 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00198 Bma-Chr4:1756226 Bma15g00848 Bma-Chr15:21720597 6.76E-40 dispersed
Bma01g02302 Bma-Chr1:80598059 Bma04g00198 Bma-Chr4:1756226 1.20E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00198 K10666 - rcu:8260936 216.468