Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00214 ATGTTCAGGAACCAGTACGATACTGATGTGACGACGTGGAGCCCTGCTGGGCGGTTGTTTCAGGTTGAGTATGCGATGGAGGCTGTCAAGCAGGGTTCCGCCGCCATTGGCCTTCGATCCAAGACTCACGTCGTTTTGGCCTGCGTTAACAAGGCTAATTCCGAGCTTTCTTCGCATCAGAAGAAGATCTTTAAGGTGGACGATCATATTGGCGTCGCTATTGCCGGACTTACTGCCGACGGTCGTGTTCTTTCCCGCTATATGCGATCTGAGTGCATCAATTACAGCTACACTTACGAGTCTCCGCTTCCCGTGGGTAGACTCGTCGTTCAACTCGCTGATAAGGCGCAGGTTTGCACCCAGCGATCATGGAAACGGCCTTATGGTGTTGGCCTGCTGGTAGCTGGCTTAGATGAATCCGGAGCTCATCTTTATTATAATTGCCCCAGTGGAAACTATTTTGAATACCAGGCTTTTGCTATAGGATCTCGCTCCCAAGCTGCAAAGACATATTTGGAAAGAAGATTTGAGAGCTTCACTGGCTCGTCAAGGGACGAGTTGATCAAAGATGCACTTATTGCTACTCGTGAAACCTTGCAGGGAGAGAAGCTGAATAGTTCTGTTTGCACGATTGCTGTGGTAGGAGTTGGGGAGCCTTTCCATATATTGGGCCAAGAAACTGTGCAGCAGTTGATTGATGCATTTGAGATAGTGGAAGAGGAAGAGGCTCCTGCAGCCGAACCTGGAGGTATTGATGACCAAAAAGGTGAAGAACAGGGTGCCACCAGCACCGGCGCTGGCACTGGCGCCGGTGCCAGCCCTGACCAAGGTTCTGATCAGGGTGTGGCTCCCATGGATATATGA 864 50.69 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFTGSSRDELIKDALIATRETLQGEKLNSSVCTIAVVGVGEPFHILGQETVQQLIDAFEIVEEEEAPAAEPGGIDDQKGEEQGATSTGAGTGAGASPDQGSDQGVAPMDI 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1841168 1843421 - Bma018663.1 Bma04g00214 80583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00214 287 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Bma04g00214 287 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Bma04g00214 287 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 249 - -
Bma04g00214 287 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Bma04g00214 287 MobiDBLite consensus disorder prediction 257 275 - -
Bma04g00214 287 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 249 - -
Bma04g00214 287 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Bma04g00214 287 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Bma04g00214 287 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Bma04g00214 287 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Bma04g00214 287 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Bma04g00214 287 MobiDBLite consensus disorder prediction 241 287 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02327 Bma04g00214 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00214 Bma-Chr4:1841168 Bma07g00875 Bma-Chr7:30002823 4.76E-45 dispersed
Bma04g00214 Bma-Chr4:1841168 Bma01g02327 Bma-Chr1:80765164 4.52E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00214 K02725 - zju:107420295 484.567