Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00272 CAGGTTTGTTTTTCGCATGCTGATGCTGATGTGCCTAATCTCAGCAAAGTTGTGGCACATATTGATGAGAATGAGTCAGAAATTGCTTCACCTGAGGAGTTTTATGAGGTTGAAGAGATTTTTAGCAATGTAGGAGACGCAGAAGTAAAGGGGAACTATGATCCCCAAGAGAATCCAAAAAATAGTTCAGATCAGAAAGAAGTTTGGAAGGAGGACTTGGATCCTTCCCATTTTCAAGACTGTGCATCAGATGATGGGAATCGGAAACATGATCTAAAGATGGATTATAATAATGATTCGGTGAAGGACATTGCTGTTGATGACGTCAAGTATAAAATAATTGAGAAAGTGGATTCAGTGAAGGATATTGCTGTTGATGATGGGGATATTGCGCCAAACTTTTCATTAGTTGAGGTTGAGAAGCTGAAAGATGTAACCGAGGAATTGATAGTAGATGGTTTTGAAAAATTGGAGGAAATGGAAATAATGGGGGATGAAGAAATTATACCACAAATACAAGAGTCGAAAAACTTAAGAGCTGATGGCTCTAGACTGAGATCTGAAAAATCACCACCACTCGCTTCTTCAAGGGAACATCCTACTTCTGCAAAATCAACCAATGAAACTGGTGTAGCCAAGCAAACGATTGAAGAGCAGGAAACTCAGGGATTTCTTGCAAAACAAGCAAAGCCCAATGTCATATCTCGGTGGATACCTCCTAACAAAGGATCTCATGCAAACTCGGCTCGTGTATCCTACCCACCATCTAGATATAATAGTGCACCAGCTGCTCTTACTAGCACTCTTCCCTCTCAAGATGATGATTCAAATTCAAAGTCAGAGGACGATTCTGCTACCTCTACTAATTGGATGCCAAATGGTGACACAAGTGACCAAAAAGATTACCCCCCTGCCCCAACATTCTTTAGTCGTATAGAACTAAAAAGTTCTCTTCCATCATCAACATTGTCTATCCAACCAACACAACCACTTTCACCACCATCTCCAACACCTCTATCGTCATCTAAAATGACTTTGGGCCCTCATATTCCTCCCCCTCCCCCACCTCCTCCATCCAATAGGCAGAATAGTGTAACATTATTGTCTCCCCTACCTCCTCCATCTAGTAGGCAAAATAGTGTAACGTTGTTGCCCCCTCCCCCTACCTCCCAATTGCAAGGACCACCACCTCCACCACCTCCTCCGATGCGAGTACCGCCACCTCCACCACCTCCTCCGATGCTTGGAGTGCCACCTCCTTTGTCTGGAGCACCACCACCTCCTCCATCTCAAGGTGGAGCGCCACCTCCTCCACCTCCTCCATTTCGAGGAGCGCCTCCTCCGCCACCACCTCCTATGCACGGAGTGCCTCCTCCTCCACCGCCTCTTGTGCGCAGTGCACCACCACCTCCTCCAATGCAAGGAGCACCTCCTCCCCCACCTCCTCCAATACGAGCAGGAGCGCCACCTCCTCCAATGCAAGGAGCGCCACCTCCTCCACCACCACCAATGCACGGAGCACCTCCTCTTCGTGGATCAACACCTCCACCTCCCAGGGGTGGTCCCCCTCCCCCTCCTCCACCAGGGGCTCGTGTTCCGGGCCCACCTGCTCCTCCTAAACTTCCAGGTGGTGGGCCTCCTCCACCTCCACCTTTAGGTGCCAAAGGAGCTAATGCTTCTCCTGATGCAAGAGGTCTTGCTGCAGGGAGAGGTCGTGGGCTGTCACGTCCTTCAAGCATGAATGTTGTAGGACCTCGACGATCCTCTTTGAAGCCTTTGCACTGGAGCAAAGTGACTAGAGCCTTGCAAGGGAGCTTATGGGATGAAATCCAAAGATACGGAGAGCCTCAAATTGCACCAGAGTTTGATGTATCTGAGCTAGAGACCCTTTTCTCTGCAACTGTCCCAAAACCTGCTGATGCAGGAGGCAAATCAGAAGGCCGACGGAAGTCAGTCGGATCCAAGACTGACAAAGTGCATTTGATTAACCTAAGAAGAGCGAATAACACCCAGATTATGCTCACCAAAGTTAAGATGCCACTTTCTGATGTGATGCTTGCAGTGCTGGCAATGGATGAGTCAGTCTTAGAAGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCAACAAAAGAGGAGATGGAACTTCTCAAGGGATACACGGGGGACAAAGACAGTCTTGGAAAGTGTGAACAATATTTTATGGAGCTGATGAAAGTACCTCGGGTGGAGTCGAAGTTAAGAGTATTTTCTTTCAAAATTCAATTTCGCTCTCAGATTTCAGAATTCAAAAAGAGTTTAAACACCATAAACTCTGCTTGTGAAGAGGTCAGGAATTCTGTTAAAGTCCTTGCTTCTTGGTCACCAACACTGCTTGATTTCCATCTAGACGTGGGCAGTCTAGAAGCTGCATCTAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCAATAATTAAGGGATTAGAGAAGGTCAAGCAGGAGCTAGTTGCCTCTGAAAGCGATGGTCCGGTCTCGGATGTTTTTCGTAAGACATTGAAAGACTTTGTGGACATCACGGAGACTGAGGTGGCATCTGTGACAAATTTATACTCAGTGGTGGTAAGTAGAAATGCAGATGCACTCGCTCTATATTTTGGTGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTGTAGCGATTCTCTTAAATTTTATAAGAATGTTCCGTAAAGCCCACGAAGAGAACTACAAACAGGCCGAATTAGAAAAGAAGAAAGCAGAGAAAGAAGCGGAAATGGAGAAGGCTAAGGGCATTCATCTAACAAAGAAGAGTGGGAAATAG 2826 46.39 QVCFSHADADVPNLSKVVAHIDENESEIASPEEFYEVEEIFSNVGDAEVKGNYDPQENPKNSSDQKEVWKEDLDPSHFQDCASDDGNRKHDLKMDYNNDSVKDIAVDDVKYKIIEKVDSVKDIAVDDGDIAPNFSLVEVEKLKDVTEELIVDGFEKLEEMEIMGDEEIIPQIQESKNLRADGSRLRSEKSPPLASSREHPTSAKSTNETGVAKQTIEEQETQGFLAKQAKPNVISRWIPPNKGSHANSARVSYPPSRYNSAPAALTSTLPSQDDDSNSKSEDDSATSTNWMPNGDTSDQKDYPPAPTFFSRIELKSSLPSSTLSIQPTQPLSPPSPTPLSSSKMTLGPHIPPPPPPPPSNRQNSVTLLSPLPPPSSRQNSVTLLPPPPTSQLQGPPPPPPPPMRVPPPPPPPPMLGVPPPLSGAPPPPPSQGGAPPPPPPPFRGAPPPPPPPMHGVPPPPPPLVRSAPPPPPMQGAPPPPPPPIRAGAPPPPMQGAPPPPPPPMHGAPPLRGSTPPPPRGGPPPPPPPGARVPGPPAPPKLPGGGPPPPPPLGAKGANASPDARGLAAGRGRGLSRPSSMNVVGPRRSSLKPLHWSKVTRALQGSLWDEIQRYGEPQIAPEFDVSELETLFSATVPKPADAGGKSEGRRKSVGSKTDKVHLINLRRANNTQIMLTKVKMPLSDVMLAVLAMDESVLEVDQVENLIKFCPTKEEMELLKGYTGDKDSLGKCEQYFMELMKVPRVESKLRVFSFKIQFRSQISEFKKSLNTINSACEEVRNSVKVLASWSPTLLDFHLDVGSLEAASKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSDVFRKTLKDFVDITETEVASVTNLYSVVVSRNADALALYFGEDPARCPFEQVVAILLNFIRMFRKAHEENYKQAELEKKKAEKEAEMEKAKGIHLTKKSGK 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2221666 2231337 + Bma018724.1 Bma04g00272 80641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00272 941 MobiDBLite consensus disorder prediction 282 296 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 194 228 - -
Bma04g00272 941 ProSiteProfiles Formin homology-2 (FH2) domain profile. 580 941 IPR015425 -
Bma04g00272 941 Coils Coil 904 933 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 241 274 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 175 588 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 347 361 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 60 94 - -
Bma04g00272 941 Pfam Formin Homology 2 Domain 587 783 IPR015425 -
Bma04g00272 941 Pfam Formin Homology 2 Domain 782 903 IPR015425 -
Bma04g00272 941 Gene3D Formin, FH2 domain 784 937 IPR042201 -
Bma04g00272 941 SMART it6_source 168 939 IPR015425 -
Bma04g00272 941 PANTHER FORMIN-J 2 389 - -
Bma04g00272 941 PANTHER FORMIN-J 453 933 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 362 387 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 46 94 - -
Bma04g00272 941 Coils Coil 809 833 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 313 328 - -
Bma04g00272 941 SUPERFAMILY Formin homology 2 domain (FH2 domain) 657 931 - -
Bma04g00272 941 MobiDBLite consensus disorder prediction 388 555 - -
Bma04g00272 941 Gene3D Formin, FH2 domain 582 783 IPR042201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00272 Bma-Chr4:2221666 Bma06g00166 Bma-Chr6:2113391 7.28E-21 dispersed
Bma04g00272 Bma-Chr4:2221666 Bma03g00839 Bma-Chr3:8003230 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00272 - - zju:107419218 601.668