Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00291 ATAATGGAGTGCCAGAATCAGCAGCAAAACCGAGAAGATCAACTACCAATGCAAATGCCATTTGATCATCAGTTGCAGAACCCCGATGGGTTGTTCGTGAAGGTGATGACGGACGAGCAAATGGAGCTTCTCCGGCGGCAGATCTCTGTCTACGCTTCCATTTGTGAACAGCTTGTCGAGATGCACAAGGCTATGACCGCCCAACAGGACCATACTGGGAATCCATATTATGATCCAATGACGGCATCTAGTGGGCACAAGATTACGGCTCGGCAAAGGTGGACGCCAACGCCTATGCAGCTTCAAATACTCGAGCATATTTTTGACGAAGGAAATGGCGCTCCAAGTAAGCAGAAGATTAAGGAGATAACTATCGACCTTTCACAACACGGGCAAATCTTGGAAGCAAATGTGTATAATTGGTTCCAGAACAGAAGAGCACGCAGTAAAAGAAAGCAGTCAGCTTCAATCCCTAACAATGCAGATTCAGAAGTGGAAACAGAAGTAGATTCGCCAAAGGCAGTGGGTGCCCCATCATTTGAGAATCATGCACATAGAAGTGGTGATGTCTACGGGAAATCCGAGTTGGGCGTTGAAATGCAGGGCTTGGATGGACGCAACCTGTTTTTCACTTGA 636 47.01 IMECQNQQQNREDQLPMQMPFDHQLQNPDGLFVKVMTDEQMELLRRQISVYASICEQLVEMHKAMTAQQDHTGNPYYDPMTASSGHKITARQRWTPTPMQLQILEHIFDEGNGAPSKQKIKEITIDLSQHGQILEANVYNWFQNRRARSKRKQSASIPNNADSEVETEVDSPKAVGAPSFENHAHRSGDVYGKSELGVEMQGLDGRNLFFT 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2338187 2339251 + Bma018745.1 Bma04g00291 80660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00291 211 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Bma04g00291 211 SUPERFAMILY Homeodomain-like 90 155 IPR009057 -
Bma04g00291 211 PANTHER - 2 205 - -
Bma04g00291 211 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Bma04g00291 211 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 205 IPR044559 GO:0003700
Bma04g00291 211 MobiDBLite consensus disorder prediction 149 188 - -
Bma04g00291 211 CDD homeodomain 91 153 IPR001356 GO:0003677
Bma04g00291 211 Gene3D - 92 156 - -
Bma04g00291 211 SMART HOX_1 89 156 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02412 Bma04g00291 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00291 Bma-Chr4:2338187 Bma06g00075 Bma-Chr6:1177395 5.72E-44 dispersed
Bma10g00996 Bma-Chr10:23492870 Bma04g00291 Bma-Chr4:2338187 2.05E-148 transposed
Bma01g02412 Bma-Chr1:81704465 Bma04g00291 Bma-Chr4:2338187 3.01E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57132 PF00046 Homeodomain 4.40E-16 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00291 - - bhj:120085747 259.225