Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00297 TCTCCGGTCATGGGGCTTAAGGTCCTCTCCGCCCTCGACACTGCCAAAACCCAATTCTACCACTTTAAGGCCATCATCGTCGCCGGGATGGGGCTCTTCACCGACGCCTACGATCTCTTTTGTATCAGTACTGTGATTAGGCTCATCGGAAGAATTTACTACTCCAATCAATCTCAGTCTCAACTCTACGAGATTCCTCCTGTCGTCAAATCTTCTTTGCTGGCTGTGCCGCTTCTTGGGACTGCTGTCGGTCAAATCGTGTTCGGTGCGCTTGGAGATCGGGTCGGTCGCCGCCGGGTCTACGGGCTCGCGCTGGCCATCATGGTGTTCAGCTCCATAGGGTGCGGGTTTTCCATCTGCACCACGCGGAGTTGCGTTCTGCTGAGTCTCGGCTTATTCAGGTTCATTCTAGGACTGGGCATCGGCGGGGACTACCCATTGTCGGCGACCATTATGTCGGAGTTTGCCAACCAGAGGACGCGTGGCGCATTCATAGCCTCTGTTTTTTCGATGCAGGGATTTGGGATTTTGGCGGCATCCATGGTGACGATGATTGTGTGTTCGATTTTCGATCGCGCGACGGAGGCGACGGTGAATAAGACGCCGAAGGAGGCTGATATTGCATGGAGGCTAATACTGATGCTCGGTGCAGTTCCGGCAGCCTTGACCTATTATTGGCGTATGATGATCCCGGAAACAGCAAGGTATACGGCTCTGGTGAAGAATAACGTGTTACAGGCGGCGAAAGACATGGAGAAAGTGTTGGATGTCTCGATTAGTCAGATTGCAGAAGACAACCCCTCCCCATCAACTCTCCCTTCCTATCCATTATTTTCCAAGGAATTCTTTTGGCGCCATGGCCGTGATCTCTTCGCCTGCTCCGCCGCATGGTTTCTCGTTGACGTTGTCTTTTACAGCAGCAACCTCTTCCAGTCTCAAATATACACTCGATACCTACCCAATAAAACACAAGTCAATGCCTATCAGGATGCATATAATAGTGCCAAATTTCAGGCGATTGTCGCCGTCTGCTCTACAATTCCAGGCTACTTTTTCACAGTCTATTTCATCGATCGCGTCGGGAGAGTCAAGATCCAAGTAATGGGGTTCTTATTAATGGCTGTAATTTACCTTTCGATTGGAATACCCTACTATTTATACTGGGAAAACAATACAAACGCAGGCTTTATGATCCTCTATGGCCTCACCTTCTTCTTCGCAAATTTTGGACCCAACACCACCACATTCATAGTCCCGGCAGAGCTATTTCCGGCAAGGTTCCGATCAACATGTCACGGCATTTCAGGCGCCGTCGGGAAAGTGGGGGCTGTGATCGGATCGGTGGGGTTTTTATGGGCCTCGCATAAGGACAAATCGGATGGTTATCCAAAAGGAATCGGAATGACGGCATCGCTGGTGATCTTGGGCGGGGTGTCTATAGTCGGAGCTGTTATCTCATATTTCTTTACCAGAGAGACCATGGATAGATCTTTAGAAGAGAACGAGAAGGAAGAGGATGACTACGAGTTGCCTGTGTCGAGATGCTTGAGACCCAGTAGTGTTCGTTCACATTTCTCTCCCAACGCAAGAAATCATCAAGATGAAAACTGA 1611 49.78 SPVMGLKVLSALDTAKTQFYHFKAIIVAGMGLFTDAYDLFCISTVIRLIGRIYYSNQSQSQLYEIPPVVKSSLLAVPLLGTAVGQIVFGALGDRVGRRRVYGLALAIMVFSSIGCGFSICTTRSCVLLSLGLFRFILGLGIGGDYPLSATIMSEFANQRTRGAFIASVFSMQGFGILAASMVTMIVCSIFDRATEATVNKTPKEADIAWRLILMLGAVPAALTYYWRMMIPETARYTALVKNNVLQAAKDMEKVLDVSISQIAEDNPSPSTLPSYPLFSKEFFWRHGRDLFACSAAWFLVDVVFYSSNLFQSQIYTRYLPNKTQVNAYQDAYNSAKFQAIVAVCSTIPGYFFTVYFIDRVGRVKIQVMGFLLMAVIYLSIGIPYYLYWENNTNAGFMILYGLTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAVIGSVGFLWASHKDKSDGYPKGIGMTASLVILGGVSIVGAVISYFFTRETMDRSLEENEKEEDDYELPVSRCLRPSSVRSHFSPNARNHQDEN 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2371145 2372862 + Bma018751.1 Bma04g00297 80666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00297 536 Pfam Sugar (and other) transporter 26 502 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bma04g00297 536 CDD MFS_PhT 25 493 - -
Bma04g00297 536 ProSitePatterns Sugar transport proteins signature 2. 136 161 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bma04g00297 536 SUPERFAMILY MFS general substrate transporter 12 505 IPR036259 -
Bma04g00297 536 Gene3D MFS general substrate transporter like domains 20 514 IPR036259 -
Bma04g00297 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 506 - -
Bma04g00297 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857
Bma04g00297 536 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 4 506 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00297 Bma-Chr4:2371145 Bma09g00598 Bma-Chr9:43165097 0 dispersed
Bma04g00297 Bma-Chr4:2371145 Bma10g00416 Bma-Chr10:4352145 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00297 K08176 - qsu:112010658 776.933