Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00363 ATGTGCGTGTGTTCTGCGCATTTCTTCTTCTTCTTCTTCTTTGTCTATTCTGCACATTTCTTACTATTTAATCCAATGGCTTCCAATCAAACTTCCATCAACAATGGTAAGTTTTCCACGTCATCAAACGTCGAAAACCAAACTAACTTAGAAATCAAAGCTGGTGACAATTTCGACTACTCGAAAAGAGCTCAATGGCTACGTGCTGCCGTTTTGGGTGCAAACGACGGGCTAGTCTCCACTGCTTCATTAATGATGGGGATTGGAGCTGTAAAACAAGACGTTAAAGCTATGATTCTAACTGGATTTGCTGGTCTGGTTGCTGGAGCTTGTAGTATGGCTATAGGAGAGTATGTTTCTGTGTATTCTCAGCTGGAAATAGAGCTTTCTCAGATCAAAAGAGAGAAGGAAAAGTCGGTTGGAAGGTCAAGAGCAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGATGAAGAAAAAGAGAAATTGCCAAACCCATTACAAGCAGGAGCAGCTTCAAGTTTATCGTTTTCTTTAGGAGCAATGGTTCCTCTCTTAGCAGCTTCGTTTATAAAAGAATATAAAGTGAGGCTTTGGGTGGTGGTTAGTGCTGTGACCTTGGGTTTAATGGGGTGTGGTTGGTTAGGAGCTGTGCTTGGAAAAGCTCCAGTTGTTCGGTCTTCGACAAGAGTTTTGTTTGGAGGTTGGCTAGCCATGGCTATAACCTTTGGTTTGACCAAGTTAATCGGCTCGAGTGCACTGCAGTAA 768 42.19 MCVCSAHFFFFFFFVYSAHFLLFNPMASNQTSINNGKFSTSSNVENQTNLEIKAGDNFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDVKAMILTGFAGLVAGACSMAIGEYVSVYSQLEIELSQIKREKEKSVGRSRAEEEEEEVEEEEDEEKEKLPNPLQAGAASSLSFSLGAMVPLLAASFIKEYKVRLWVVVSAVTLGLMGCGWLGAVLGKAPVVRSSTRVLFGGWLAMAITFGLTKLIGSSALQ 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2924707 2925474 + Bma018821.1 Bma04g00363 80732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00363 255 MobiDBLite consensus disorder prediction 138 166 - -
Bma04g00363 255 Coils Coil 122 162 - -
Bma04g00363 255 Pfam VIT family 152 246 IPR008217 GO:0005384|GO:0030026
Bma04g00363 255 Pfam VIT family 67 153 IPR008217 GO:0005384|GO:0030026
Bma04g00363 255 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 43 251 - -
Bma04g00363 255 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 43 251 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00363 Bma-Chr4:2924707 Bma08g00451 Bma-Chr8:18138112 1.21E-75 dispersed
Bma01g02501 Bma-Chr1:82725543 Bma04g00363 Bma-Chr4:2924707 2.05E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00363 K22736 - tcc:18592592 307.76