Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00364 ATGGGTAGAAAGAAGCCAATTGCTCGGGAAGACGATAACGCAACTTCCCCGGCTCAGGGAGGAGCTAAGTCCAAGAAGAAGGCGCTTTTAATAGAGAGTAGGGTTGAAGAAGATGACGATGAGCCTGTGCCTGTTATTAATTTTACGGTAAAGAAGAAGAAGTCTTCCAAAGGTGGAAAGGGTAAGAAGAAGTCTTCAAAGAAGAAAAGTAACAGTGTTTTTGTTTCATTGGATGATGAGAGTAGGCTTGAGAGTGCCAGTAGAGCAAGAGTTGAGCCTGAGTTACTGAATGGAGGATCTAGCAATGTTGATGCTGGTACCTCGGTGGCTAATAAGTATGAAGAGGTCACCGAGACTTCAAAAAATAAGAAAAAGAAGAAGAAGAGTGGAAGGACTGCTCAGGAGGAAGATGATTTGGATAAGATTCTTGCAGAACTTGGTGAGGTGCTGCCAGTACTCTTCCTCCAAAAGAGGAATGTTCAGTTTGAACCAACTCTGCCTGTTGATGCTTCTACCGAGAAGGAAGCTAAGAGTAAAGTTCCTGAGAAGAAAGTGCCAAAGCATGTTAGGGAAATGCGGGAAGAAATGGCCAGGAGAAAAGAAGAGGAGGAAAGGAAAAGGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAAGCAAAGCGAAGGAAAAAGGAAAAAGAAAAGGAGAAGCTTCTGAAGAAGAAATTGGAAGGCAAGCTTTTGACTGGGAAGCAAAAGGAAGAACAGCGTAGGTTACAGGCAATGAAGAACCAGTTTCTTGCAAATGGTGTGGGTTTGGCTCTTCCCACAGCAGACTCTGGTGCACCAGGCAAACGGCCCATATACAAGACAAAGAAGACCAAAATGACACAACACCAAGCAAGCAGTAGTCCAGCTAAAGTGGTTGAGAACATAGAAGAAATTGAAAATCAGCAAGACACTGTGTCAGAGGTTGAATACGTGGAAGGGAAGAACATTGAAGAAGCAGAAACAATTAATGTGGATGAGAAATCTGGAATTTCTGAAACTGTCGAAGAGAATGGAATAGTCGAAGAGGATGAGAATGAGGATGACGATGAGGATGAATGGGATGCGAAGGGCTGGGATGATGCTGTTGTTAGTCTATCTATTAAAAGTGCATTTTCCAATGAAGAAGACACTGTATCAGAGCCCATGGTGAAAAAAGAGAAAAAGGCTGTACCAGCTTCTCGTCATGCAGCGCTGTTTTCCCAGCTGTTAATTGTGGGAATGTTTTTTCTTGCAGAAACAATTGTAGGCAGCACACCAGCTCTTTCTGTCAGCCAAAGTTTTTCCTCTAAGGATGTCGAATTTAGAAAAAAACAGCCTGAGGTGGAAATTGTGGATAATAACAAAAGAAAAAGTGCTGTTTTTAAGAAGGAAGCACCAAGTTTGGATACTGCTTCTAAAAAGAGTGAAAATAATCTCCGTTCTCCTATTTGCTGCATTATGGGCCATGTTGATACTGGTAAAACCAAGCTTCTGGATTGTATCCGAGGAACTAATGTTCAAGAAGGTGAGGCTGGAGGTATTACCCAACAGATTGGAGCGACTTATTTTCCTGCAGAAAACATACGCGAAAGAACTAGAGAGTTGAAAGCAGATGCAACTTTGAAAGTTCCGGGTCTACTTGTTATTGATACCCCTGGACATGAATCGTTCACGAACCTGCGTTCTCGGGGTTCTGGTTTATGTGATATTGCAATTTTAGTCGTTGACATTATGCATGGTTTAGAGCCACAAACAATAGAATCACTCAATTTATTAAAAATGAGGAACACAGAATTCATTGTTGCACTTAATAAGGTGGATCGACTGTACGGGTGGAAAACATGTCGAAATGCACCAATTGTGAAGACAATGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTCAATATGAGGCTCACTCAGATTATTACTCAATTCAAAGAGCAGGGTTTAAATACTGAACTATATTATAAAAATAAAGAAATGGGGGAAACTTTCAGTATAGTACCGACAAGTGCAATAAGTGGTGAAGGCATACCAGATTTGTTATTGTTGCTGGTCCAATGGACTCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAGTACAGTGTACAGTGTTGGAGGTCAAGGTGGTTGAAGGCCATGGAACAACCATCGATGTTGTATTAGTTAATGGTGTGCTTCATGAAGGAGACCAAATAGTTGGTCCAATTGTTGCTTCCATTCGGGCATTATTGACACCCCACCCAATGAAGGAACTCCGAGTTAAGTTGACATTCTGTTGGTTTGTTGGTTATAAAAATTTTGTATATGACCATTGTGTTTTTGCTGTGGGAAGTTACACCTCGACCATAGTTTTGATATCACTATGTGTTGTTACTGACATTCTGTATGTAACTTGGGGCACATATCTGCATCATAAGGAAATTAAGGCTGCCCAAGGGATCAAAATTACGGCCCAGGGCCTTGAGCATGCTATTGCGGGAACTGGTCTTTATGTGGTAGGTCCAAGCGATGACTTGGACAACATCAAAGAATCAGCCATGGAAGATATGAAGTCAGTCTTGAACAGGATCGACAAGAGTGGCGAAGGGGTTTGTGTGCAAGCATCTACACTGGGTTCTTTGGAAGCATTGTTGGAGTTTTTGAAGTCTCCTGCTGTTAATATTCCTGTCAGTGGAATAAGCATTGGTCCCGTACATAAAAAAGATGTTATGAAGGCCAGTGTGATGCTTGAAAAGAAGAAGGAATATGCCACTATCTTGGCTTTTGATGTCAAAGTGACACCAGAGGCTCGTGAGCTTTCTGATGACCTGGGTGTGAAGATTTTTATTGCTGACATCATTTATCACTTGTTTGATCAGTTTAAGGCTTACATTGACAATATTAAAGAGGAAAAAAAGAAAGAAGCTGCTGATGAAGCTGTATTTCCATGTGTTCTCAAAATTTTACCAAATTGTATTTTCAATAAGAAGGATCCAATCGTCTTGGGGGTGGATGTACTTGAAGGCATTGCAAAGAAAATTTGTTGTTTGACTTTGTGTATAGTGGGCTCTTCTCCTGAGGAACAGCAAAAAATGTTTGGTAGGCATTTTGAGCTGGAGGATGAACTTGATGATTTGTCCATAGAGGAGTGGAGGCTGGTGGTGAAATTGAAGTCCCTTTTCAAGATACAATGA 3240 41.45 MGRKKPIAREDDNATSPAQGGAKSKKKALLIESRVEEDDDEPVPVINFTVKKKKSSKGGKGKKKSSKKKSNSVFVSLDDESRLESASRARVEPELLNGGSSNVDAGTSVANKYEEVTETSKNKKKKKKSGRTAQEEDDLDKILAELGEVLPVLFLQKRNVQFEPTLPVDASTEKEAKSKVPEKKVPKHVREMREEMARRKEEEERKRREEEEKLRREEEERLRQEELERQAEEAKRRKKEKEKEKLLKKKLEGKLLTGKQKEEQRRLQAMKNQFLANGVGLALPTADSGAPGKRPIYKTKKTKMTQHQASSSPAKVVENIEEIENQQDTVSEVEYVEGKNIEEAETINVDEKSGISETVEENGIVEEDENEDDDEDEWDAKGWDDAVVSLSIKSAFSNEEDTVSEPMVKKEKKAVPASRHAALFSQLLIVGMFFLAETIVGSTPALSVSQSFSSKDVEFRKKQPEVEIVDNNKRKSAVFKKEAPSLDTASKKSENNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADATLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVGPIVASIRALLTPHPMKELRVKLTFCWFVGYKNFVYDHCVFAVGSYTSTIVLISLCVVTDILYVTWGTYLHHKEIKAAQGIKITAQGLEHAIAGTGLYVVGPSDDLDNIKESAMEDMKSVLNRIDKSGEGVCVQASTLGSLEALLEFLKSPAVNIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELSDDLGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKKICCLTLCIVGSSPEEQQKMFGRHFELEDELDDLSIEEWRLVVKLKSLFKIQ 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2926167 2932943 - Bma018822.1 Bma04g00364 80733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00364 1079 MobiDBLite consensus disorder prediction 355 377 - -
Bma04g00364 1079 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 497 713 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 SUPERFAMILY Translation proteins 995 1028 IPR009000 -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 164 244 - -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 361 377 - -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 170 244 - -
Bma04g00364 1079 CDD IF2_eIF5B 500 710 - -
Bma04g00364 1079 Pfam Elongation factor Tu GTP binding domain 501 709 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 PRINTS GTP-binding elongation factor signature 565 575 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 PRINTS GTP-binding elongation factor signature 581 592 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 PRINTS GTP-binding elongation factor signature 617 626 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 PRINTS GTP-binding elongation factor signature 501 514 IPR000795 GO:0003924|GO:0005525
Bma04g00364 1079 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE 1027 1079 - -
Bma04g00364 1079 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE 108 780 - -
Bma04g00364 1079 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1027 1079 IPR015760 -
Bma04g00364 1079 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 108 780 IPR015760 -
Bma04g00364 1079 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 821 1032 IPR015760 -
Bma04g00364 1079 Gene3D Translation factors 817 879 - -
Bma04g00364 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 778 IPR027417 -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 100 115 - -
Bma04g00364 1079 Coils Coil 189 251 - -
Bma04g00364 1079 CDD aeIF5B_II 721 870 - -
Bma04g00364 1079 Pfam Translation-initiation factor 2 865 977 IPR023115 -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 282 318 - -
Bma04g00364 1079 Gene3D - 880 984 IPR036925 -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 1 138 - -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 27 47 - -
Bma04g00364 1079 TIGRFAM small_GTP: small GTP-binding protein domain 502 626 IPR005225 GO:0005525
Bma04g00364 1079 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE 821 1032 - -
Bma04g00364 1079 Gene3D - 490 718 IPR027417 -
Bma04g00364 1079 Gene3D Translation factors 991 1035 - -
Bma04g00364 1079 MobiDBLite consensus disorder prediction 53 69 - -
Bma04g00364 1079 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 861 990 IPR036925 -
Bma04g00364 1079 Gene3D Translation factors 719 783 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00364 Bma-Chr4:2926167 Bma07g01227 Bma-Chr7:47163420 9.45E-22 dispersed
Bma01g02502 Bma-Chr1:82726800 Bma04g00364 Bma-Chr4:2926167 1.95E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00364 K03243 - zju:107427478 1103.97