Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00367 | ATGCTGGGCGACTCGAGTGTCTTAGGCAGCTCCGGTGATGCCACCCCGTCTGTTCCACCCTCGCTTCTAGCTCACCCCCACGATGCCGCCTCCGACGCCGGCGGCGCTGCTGCTTCCAATTCTGCTGATGAAGACAGAGGGAGAGGCGGGGATGAAGGGGACCGGAATTTCGGTGGGAATAGGTGGCCGAGACCGGAGACTTTAGCTCTTCTCAAGATTCGCTCCGATATGGAAGTGGCTTTCCGAGATGCAAGCGTTAAGGGTCCATTATGGGAAGAAGTATCCAGAGCTCGTATTTTCTTTTACCTTTTGTTGGGACACTGCGTTTGCCATTGCAGGAAACTCTCAGAGCTTGGATATCATCGAAGCTCCAAGAAATGCAAGGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAAAGAAGGAAGAAGCGGCAAACCAGATGGAAAAACCTACAGATTTTTCGATCAACTAGAAGCAATGCAAACTCAGTGTCCGTCATTACAGTCACTATCTTCTTCACAGCAGCCTAGACCTCAAGGTCCAATGCCGTCTGCAACAATGGCGGCTGCGATCACGATGGCTAATCCTCAAGCTGTCTCCCAGGGCTCCACTGTTCCATCAATGGCGGGTCATCACTTGGTGGGTGTGTCTCAAACTATTCCTTCGTTTCAACATAGCAACCCAACCATTCTTCCTCCGCCTCCTCAATCAAACCCTACACATAATCCATTTCAAACGCCCTTTTCATCGTCTTTTCCGAACCTCGCTGCCGATCTCATTTCGAATTCTACTTCTTCGTCGACTTCGTCAGACGAAGAATTGGAGAGCCGGAGGAGAAGAAAGAGGAAATGGAAGGATTTTTTCGAGAGGTTAATGAAGGAGGTGATCCATAAGCAAGAGGAACTACAGAAAAAATTCTTGGAAGCGGTAGAGAAACGCGAACACGAAAGAATGGTTAGACAAGAAGCTTGGAGGATTCAGGAAATGGCCAAAATCAATAGGGAGAGAGAAATTCTAGCTCAAGAACGATCAATGGCTGCAGCGAAGGACGCTGCAATAATGTCGTTTCTGCAGAAAATATCAGAACAGCAAGGCCAAAACCCTGGTCAGATTCTGAATTTCAATCTTCCAACATTGCAGCCGCTGCCTGCCGCTCCTCCACCACCTTCGCAATCTCCGGTAGCTCCTCCCCGACCTATACAGCCGCCTGCAATTCCTTCAGGCCCACCGGGACAACAACTAGTCCAACGGGTAGAGACAGAATCACTCGAACTAGCAACTAAAACTGATAACGGCGATAATTACGCATCGGCAAGCTCTTCGAGATGGCCAAAAGTGGAAGTTGAAGCTCTGATAAGTTTACGTACAAATCTTGATTCCAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAGCTTGGATACAATCGAAATGCGAAGAGATGTAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAAAAGGTGAAGGAAAGCAACAAGAAAAGACCCGAGGATTCAAAAACATGCCCCTACTTTCACCAACTCGATGCATTGTACAAGGAGAAGAACAAGTTTGATAATTCATTGTCACATATATTCAGGCCGGACAGTTCAATGGTGCCATTAATGGTGCGACCGGAGCAGCAATGGCCTCCCCAAACGGGACCTGACTCCGGCAACGAAGACATGGAAAGCGAACCGATGGATCAAAACCCAGATGAAGATGATAAAGATGGAGAAGACGAGGAAGAAGAGCACGAGAGTGGAGGAAATTACGAACTTGTTGCCAGCAAATCAGACTCAGTGAGTGCAGCCGGGTGA | 1860 | 48.01 | MLGDSSVLGSSGDATPSVPPSLLAHPHDAASDAGGAAASNSADEDRGRGGDEGDRNFGGNRWPRPETLALLKIRSDMEVAFRDASVKGPLWEEVSRARIFFYLLLGHCVCHCRKLSELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKPDGKTYRFFDQLEAMQTQCPSLQSLSSSQQPRPQGPMPSATMAAAITMANPQAVSQGSTVPSMAGHHLVGVSQTIPSFQHSNPTILPPPPQSNPTHNPFQTPFSSSFPNLAADLISNSTSSSTSSDEELESRRRRKRKWKDFFERLMKEVIHKQEELQKKFLEAVEKREHERMVRQEAWRIQEMAKINREREILAQERSMAAAKDAAIMSFLQKISEQQGQNPGQILNFNLPTLQPLPAAPPPPSQSPVAPPRPIQPPAIPSGPPGQQLVQRVETESLELATKTDNGDNYASASSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKNKFDNSLSHIFRPDSSMVPLMVRPEQQWPPQTGPDSGNEDMESEPMDQNPDEDDKDGEDEEEEHESGGNYELVASKSDSVSAAG | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2943805 | 2946230 | + | Bma018825.1 | Bma04g00367 | 80736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 575 | 601 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 225 | 283 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 383 | 412 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 168 | 184 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 245 | 273 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 230 | 244 | - | - | |
Bma04g00367 | 619 | CDD | GT1 | 60 | 142 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 168 | 187 | - | - | |
Bma04g00367 | 619 | PANTHER | - | 1 | 611 | - | - | |
Bma04g00367 | 619 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 1 | 611 | - | - | |
Bma04g00367 | 619 | Pfam | Myb/SANT-like DNA-binding domain | 60 | 163 | IPR044822 | - | |
Bma04g00367 | 619 | Pfam | Myb/SANT-like DNA-binding domain | 444 | 531 | IPR044822 | - | |
Bma04g00367 | 619 | CDD | GT1 | 444 | 509 | - | - | |
Bma04g00367 | 619 | SMART | sant | 442 | 504 | IPR001005 | - | |
Bma04g00367 | 619 | SMART | sant | 58 | 137 | IPR001005 | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 371 | 416 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 558 | 619 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
Bma04g00367 | 619 | Gene3D | - | 62 | 140 | - | - | |
Bma04g00367 | 619 | Gene3D | - | 446 | 507 | - | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Bma04g00367 | 619 | ProSiteProfiles | Myb-like domain profile. | 438 | 502 | IPR001005 | - | |
Bma04g00367 | 619 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g02505 | Bma04g00367 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00367 | Bma-Chr4:2943805 | Bma10g00079 | Bma-Chr10:799677 | 3.83E-13 | dispersed | |
Bma14g01358 | Bma-Chr14:25261654 | Bma04g00367 | Bma-Chr4:2943805 | 2.75E-12 | dispersed | |
Bma04g00367 | Bma-Chr4:2943805 | Bma04g00368 | Bma-Chr4:2952372 | 6.46E-146 | tandem | |
Bma03g01036 | Bma-Chr3:12114161 | Bma04g00367 | Bma-Chr4:2943805 | 1.08E-19 | transposed | |
Bma13g00573 | Bma-Chr13:12201969 | Bma04g00367 | Bma-Chr4:2943805 | 1.66E-11 | transposed | |
Bma01g02505 | Bma-Chr1:82747969 | Bma04g00367 | Bma-Chr4:2943805 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57142 | PF13837 | Myb_DNA-bind_4 | 3.10E-14 | CL0123 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00367 | - | - | jre:109011419 | 619.772 |