Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00367 ATGCTGGGCGACTCGAGTGTCTTAGGCAGCTCCGGTGATGCCACCCCGTCTGTTCCACCCTCGCTTCTAGCTCACCCCCACGATGCCGCCTCCGACGCCGGCGGCGCTGCTGCTTCCAATTCTGCTGATGAAGACAGAGGGAGAGGCGGGGATGAAGGGGACCGGAATTTCGGTGGGAATAGGTGGCCGAGACCGGAGACTTTAGCTCTTCTCAAGATTCGCTCCGATATGGAAGTGGCTTTCCGAGATGCAAGCGTTAAGGGTCCATTATGGGAAGAAGTATCCAGAGCTCGTATTTTCTTTTACCTTTTGTTGGGACACTGCGTTTGCCATTGCAGGAAACTCTCAGAGCTTGGATATCATCGAAGCTCCAAGAAATGCAAGGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAAAGAAGGAAGAAGCGGCAAACCAGATGGAAAAACCTACAGATTTTTCGATCAACTAGAAGCAATGCAAACTCAGTGTCCGTCATTACAGTCACTATCTTCTTCACAGCAGCCTAGACCTCAAGGTCCAATGCCGTCTGCAACAATGGCGGCTGCGATCACGATGGCTAATCCTCAAGCTGTCTCCCAGGGCTCCACTGTTCCATCAATGGCGGGTCATCACTTGGTGGGTGTGTCTCAAACTATTCCTTCGTTTCAACATAGCAACCCAACCATTCTTCCTCCGCCTCCTCAATCAAACCCTACACATAATCCATTTCAAACGCCCTTTTCATCGTCTTTTCCGAACCTCGCTGCCGATCTCATTTCGAATTCTACTTCTTCGTCGACTTCGTCAGACGAAGAATTGGAGAGCCGGAGGAGAAGAAAGAGGAAATGGAAGGATTTTTTCGAGAGGTTAATGAAGGAGGTGATCCATAAGCAAGAGGAACTACAGAAAAAATTCTTGGAAGCGGTAGAGAAACGCGAACACGAAAGAATGGTTAGACAAGAAGCTTGGAGGATTCAGGAAATGGCCAAAATCAATAGGGAGAGAGAAATTCTAGCTCAAGAACGATCAATGGCTGCAGCGAAGGACGCTGCAATAATGTCGTTTCTGCAGAAAATATCAGAACAGCAAGGCCAAAACCCTGGTCAGATTCTGAATTTCAATCTTCCAACATTGCAGCCGCTGCCTGCCGCTCCTCCACCACCTTCGCAATCTCCGGTAGCTCCTCCCCGACCTATACAGCCGCCTGCAATTCCTTCAGGCCCACCGGGACAACAACTAGTCCAACGGGTAGAGACAGAATCACTCGAACTAGCAACTAAAACTGATAACGGCGATAATTACGCATCGGCAAGCTCTTCGAGATGGCCAAAAGTGGAAGTTGAAGCTCTGATAAGTTTACGTACAAATCTTGATTCCAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAGCTTGGATACAATCGAAATGCGAAGAGATGTAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAAAAGGTGAAGGAAAGCAACAAGAAAAGACCCGAGGATTCAAAAACATGCCCCTACTTTCACCAACTCGATGCATTGTACAAGGAGAAGAACAAGTTTGATAATTCATTGTCACATATATTCAGGCCGGACAGTTCAATGGTGCCATTAATGGTGCGACCGGAGCAGCAATGGCCTCCCCAAACGGGACCTGACTCCGGCAACGAAGACATGGAAAGCGAACCGATGGATCAAAACCCAGATGAAGATGATAAAGATGGAGAAGACGAGGAAGAAGAGCACGAGAGTGGAGGAAATTACGAACTTGTTGCCAGCAAATCAGACTCAGTGAGTGCAGCCGGGTGA 1860 48.01 MLGDSSVLGSSGDATPSVPPSLLAHPHDAASDAGGAAASNSADEDRGRGGDEGDRNFGGNRWPRPETLALLKIRSDMEVAFRDASVKGPLWEEVSRARIFFYLLLGHCVCHCRKLSELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKPDGKTYRFFDQLEAMQTQCPSLQSLSSSQQPRPQGPMPSATMAAAITMANPQAVSQGSTVPSMAGHHLVGVSQTIPSFQHSNPTILPPPPQSNPTHNPFQTPFSSSFPNLAADLISNSTSSSTSSDEELESRRRRKRKWKDFFERLMKEVIHKQEELQKKFLEAVEKREHERMVRQEAWRIQEMAKINREREILAQERSMAAAKDAAIMSFLQKISEQQGQNPGQILNFNLPTLQPLPAAPPPPSQSPVAPPRPIQPPAIPSGPPGQQLVQRVETESLELATKTDNGDNYASASSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKNKFDNSLSHIFRPDSSMVPLMVRPEQQWPPQTGPDSGNEDMESEPMDQNPDEDDKDGEDEEEEHESGGNYELVASKSDSVSAAG 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2943805 2946230 + Bma018825.1 Bma04g00367 80736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00367 619 MobiDBLite consensus disorder prediction 575 601 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 225 283 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 383 412 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 168 184 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 245 273 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 230 244 - -
Bma04g00367 619 CDD GT1 60 142 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 168 187 - -
Bma04g00367 619 PANTHER - 1 611 - -
Bma04g00367 619 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 611 - -
Bma04g00367 619 Pfam Myb/SANT-like DNA-binding domain 60 163 IPR044822 -
Bma04g00367 619 Pfam Myb/SANT-like DNA-binding domain 444 531 IPR044822 -
Bma04g00367 619 CDD GT1 444 509 - -
Bma04g00367 619 SMART sant 442 504 IPR001005 -
Bma04g00367 619 SMART sant 58 137 IPR001005 -
Bma04g00367 619 MobiDBLite consensus disorder prediction 371 416 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 558 619 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 44 59 - -
Bma04g00367 619 Gene3D - 62 140 - -
Bma04g00367 619 Gene3D - 446 507 - -
Bma04g00367 619 MobiDBLite consensus disorder prediction 1 17 - -
Bma04g00367 619 ProSiteProfiles Myb-like domain profile. 438 502 IPR001005 -
Bma04g00367 619 MobiDBLite consensus disorder prediction 1 61 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02505 Bma04g00367 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00367 Bma-Chr4:2943805 Bma10g00079 Bma-Chr10:799677 3.83E-13 dispersed
Bma14g01358 Bma-Chr14:25261654 Bma04g00367 Bma-Chr4:2943805 2.75E-12 dispersed
Bma04g00367 Bma-Chr4:2943805 Bma04g00368 Bma-Chr4:2952372 6.46E-146 tandem
Bma03g01036 Bma-Chr3:12114161 Bma04g00367 Bma-Chr4:2943805 1.08E-19 transposed
Bma13g00573 Bma-Chr13:12201969 Bma04g00367 Bma-Chr4:2943805 1.66E-11 transposed
Bma01g02505 Bma-Chr1:82747969 Bma04g00367 Bma-Chr4:2943805 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57142 PF13837 Myb_DNA-bind_4 3.10E-14 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00367 - - jre:109011419 619.772