Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma04g00371 | ATGGCGTCATCGAGCTCGATTAATTCGGATCCACTGCGACGCTCTTCTTCTTCTTCTTCTTCCTCCGCTAGAAAAAGGAAAGCTCGATCTGACCAGAGCAAGCGGAACGGCAATCTTTATCCGAATCAAAACCATAATTTTACCTCTATGACCGTTGATGGCCTCCTTCGCAATGTCTATGACTCCAATCCTACGGCTAAGTCCATCCTCCTGGACGCTCAGATAACCTTAGAGGACACCTCTTGCCCGAAAAACGCCTCTCCCGCTATCAATGACGATCCTAATCGCTCTTCAAATGGACTCAAAACTGTGGATGATGTGTGGAGAGACATTGTATCAGGAACTCGGAAAGAGTTGAAAGAGGAGTGCCCTGACGATATGATGACGCTGGAGGATTTCCTAGCCAAAGCCGGCGCCGTTGACAGTGTCGACGTGAAGGTGTCGCCAACTGAGAGGTTGAGCGGAGGGATGTTTGCGTTTGATGACATCACTCCTAGTCCACTTCAATCGCTGGATAAAGTTGAGGGGGCTATTGTTGCTTATGGAAACGGAATCGATGTGTTTGGCAGTGGAGGAAGTGGGAGATTGAGGAGAGGTAGGTCTGTTGTAGAACCATTAGACAAGGCCGCTGAGCAAAGGCAAAAAAGGATGATCAAGAACAGGGAGTCAGCAGCGAGGTCAAGGGAAAGGAAGCAGGCCTATCAAGCCGAGTTAGAGTCTTTGGCTGTGAGACTAGAGGAAGAAAACGAGCAACTGTTGAAGGAAAAGGCTGAGAGGACAAAAGAAAGATATAAGGAGTTGATGGAGAAAATAATCCCAATTGTGGAGAAGCGAAGGCCACCTCGTGTTCTTAGGAGGGTTCGATCCTTGGAGTGGTAG | 879 | 48.46 | MASSSSINSDPLRRSSSSSSSSARKRKARSDQSKRNGNLYPNQNHNFTSMTVDGLLRNVYDSNPTAKSILLDAQITLEDTSCPKNASPAINDDPNRSSNGLKTVDDVWRDIVSGTRKELKEECPDDMMTLEDFLAKAGAVDSVDVKVSPTERLSGGMFAFDDITPSPLQSLDKVEGAIVAYGNGIDVFGSGGSGRLRRGRSVVEPLDKAAEQRQKRMIKNRESAARSRERKQAYQAELESLAVRLEEENEQLLKEKAERTKERYKELMEKIIPIVEKRRPPRVLRRVRSLEW | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 2978451 | 2980962 | - | Bma018829.1 | Bma04g00371 | 80740 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma04g00371 | 292 | Coils | Coil | 224 | 270 | - | - | |
| Bma04g00371 | 292 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Bma04g00371 | 292 | SMART | brlzneu | 208 | 270 | IPR004827 | GO:0003700|GO:0006355 | |
| Bma04g00371 | 292 | Gene3D | - | 210 | 269 | - | - | |
| Bma04g00371 | 292 | SUPERFAMILY | Leucine zipper domain | 213 | 263 | IPR046347 | GO:0003700|GO:0006355 | |
| Bma04g00371 | 292 | CDD | bZIP_plant_BZIP46 | 212 | 258 | - | - | |
| Bma04g00371 | 292 | PANTHER | BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR | 4 | 291 | - | - | |
| Bma04g00371 | 292 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 210 | 262 | IPR004827 | GO:0003700|GO:0006355 | |
| Bma04g00371 | 292 | Pfam | bZIP transcription factor | 210 | 268 | IPR004827 | GO:0003700|GO:0006355 | |
| Bma04g00371 | 292 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 4 | 291 | IPR043452 | GO:0003700|GO:0045893 | |
| Bma04g00371 | 292 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bma04g00371 | 292 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 215 | 230 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma01g02509 | Bma04g00371 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma04g00371 | Bma-Chr4:2978451 | Bma04g01706 | Bma-Chr4:53280979 | 2.33E-55 | dispersed | |
| Bma01g02509 | Bma-Chr1:82779991 | Bma04g00371 | Bma-Chr4:2978451 | 1.86E-115 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 57145 | PF00170 | bZIP_1 | 1.80E-12 | CL0018 | Bma | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma04g00371 | K14432 | - | zju:107421670 | 330.872 |