Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00438 ATGGCTTCTGCGGTTCCAGAAAACCTAACCAGAGAGCAGTACGTGTACATAGCGAAGCTTGCCGAGCAGGCGGAGAGATATGAAGAAATGGTTCAATTCATGCAAAAGTTAGTCCTCGGATCGACTCCAGCGTCTTCGAGGAAGCGTAATCTCTTGTCTGTGGCGTATAAGAACGTCATCGGTTCACTCCGAGCCGCTTGGCGGATCGTCTCCTCTATTGAGCAGAAGGAAGAAGGTCGGAAGAACGAAGAGCATGTGGTGCTTGTTAAAGAGTACAGATCCAAGGTCGAGGCTGAGCTCTCTGATATCTGCGCCAGTATTTTGAAGTTGTTGGATTCTAATCTGATACCTTCAGCCTCAGCTAGTGAATCCAAGGTGTTTTACTTGAAGATGAAAGGAGATTATCATAGGTATATGGCGGAGTTTAAAGTCGGGGATGAGAGGAAAGGCGCTGCTGAAGAAACTATGCTTTCTTACAAGGCTGCACAGTGTTCTGATCATGCTGGAAATTTTTTTCTTGTGAAGGATATTGCAATGGCAGAACTTGCCCCTACCCATCCAATAAGGCTTGGGCTAGCCCTTAATTTCTCCGTCTTTTACTTTGAGATTCTGAATCAGTCTGATAAAGCATGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATCGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACTCTGATAATGCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTCTTTAACTTTTCTTTCCATAACCTGTGA 1260 46.83 MASAVPENLTREQYVYIAKLAEQAERYEEMVQFMQKLVLGSTPASSRKRNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKEYRSKVEAELSDICASILKLLDSNLIPSASASESKVFYLKMKGDYHRYMAEFKVGDERKGAAEETMLSYKAAQCSDHAGNFFLVKDIAMAELAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSFFFNFSFHNL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3595375 3597819 + Bma018905.1 Bma04g00438 80807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00438 419 PANTHER BNAC02G00320D PROTEIN 8 243 - -
Bma04g00438 419 Coils Coil 17 37 - -
Bma04g00438 419 SMART 1433_4 11 265 IPR023410 -
Bma04g00438 419 SUPERFAMILY 14-3-3 protein 10 242 IPR036815 -
Bma04g00438 419 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Bma04g00438 419 Pfam 14-3-3 protein 18 242 IPR023410 -
Bma04g00438 419 PRINTS 14-3-3 protein zeta signature 224 253 IPR000308 -
Bma04g00438 419 PRINTS 14-3-3 protein zeta signature 170 196 IPR000308 -
Bma04g00438 419 PRINTS 14-3-3 protein zeta signature 197 223 IPR000308 -
Bma04g00438 419 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Bma04g00438 419 Gene3D - 2 253 IPR036815 -
Bma04g00438 419 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00438 Bma-Chr4:3595375 Bma15g01066 Bma-Chr15:42859036 4.77E-137 dispersed
Bma04g00438 Bma-Chr4:3595375 Bma09g00130 Bma-Chr9:3968325 4.39E-146 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00438 K06630 - qsu:112005245 399.823