Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00567 | ATGGAGGAGAAGGACAGCCCCTTTTCTGGATCGCCCGGAATCTCGGAGACCGAGTCGCCTCCGGCTCTAATGGCCGAGATGGCGCCTAAAGTGGCCGCCGTTGATGCGGAAAGAGGCTTTTTACCTTCGTCAACGATGATATCGGCGACTGAGAGAAGCGGAGGAGGAGGGTCGGGGAGTGGCGATTTTCTCATGAAAAAGAAGAGGGGAAGGCCGAGAAAGTATGATTCGGATGGGAACTTGAGCTTGGCTTACCAGAAAATGGCTTCGCCGGATGGGTTTTCGTTGTCACCCACTTCTCCTTCTGAGTTTTCGTCCAAAAAAGGTCGAGGTAGGGGTGCTGGGTCTGGAAACTGGCAGCTTCTTGCTTCATTAGGTGAATTGTTTGCTAATACTGCTGGAGGAGACTTTACGCCGCATGTTGTCACTGTTAACACCGGAGAGGATGTTGCGGCGAAAATTCTTTCGTTTTCACAGAAAGGGCCGAGAGGAATTTGCGTTCTATCGGCAAATGGAGCTGTTTCCAATGTTACCATCCGCCAACCAGGCTCTTCTGGTGGTATTTTGACGTACGAGGCATGTGCTTTGTTCTCCATCTCTATCTCCAGATTTGGACGATTTGAGATACTGTCTTTATCTGGGTCCTTCACAGTTACTGACAGTGATGGTATGAAGAGTAGAACAGGTGGATTAAGTGTATCGTTAGCGGGTCCAGATGGTCGGGTCATCGGTGGTGGTATCGCTGGTTTATTAATGGCTGCTAGCCCTATCCAAATTGTTGTCGGAAGTTTTGTGCCGAATAGCTTCAAGATGCATAAAAGAAAGAACCAACGAGAATATGCAATGTCTCCCCCTATTAGAGCTGTGCCAGAGGCTGTCTCGTCAGCAAGGCCGATCTCACAAGCGAATCCCGACAGCGAAATCTGTTTGGCTCCGTCGACGGGGCAAACAAACGGGGAACTGGATAGGTTGGGGAGCGATAAGCACAATCTGAATTTTCCGTCGGAGAATACTTCTTGGACTATATCGGCTCCATCGTTATCCGATCAGAGGCATTCTCCTGATATTAACATTTCTATGTCGTTTGGAGAACAGAACTAA | 1101 | 49.05 | MEEKDSPFSGSPGISETESPPALMAEMAPKVAAVDAERGFLPSSTMISATERSGGGGSGSGDFLMKKKRGRPRKYDSDGNLSLAYQKMASPDGFSLSPTSPSEFSSKKGRGRGAGSGNWQLLASLGELFANTAGGDFTPHVVTVNTGEDVAAKILSFSQKGPRGICVLSANGAVSNVTIRQPGSSGGILTYEACALFSISISRFGRFEILSLSGSFTVTDSDGMKSRTGGLSVSLAGPDGRVIGGGIAGLLMAASPIQIVVGSFVPNSFKMHKRKNQREYAMSPPIRAVPEAVSSARPISQANPDSEICLAPSTGQTNGELDRLGSDKHNLNFPSENTSWTISAPSLSDQRHSPDINISMSFGEQN | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5132139 | 5134135 | + | Bma019048.1 | Bma04g00567 | 80936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 330 | 366 | - | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bma04g00567 | 366 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 136 | 273 | - | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
Bma04g00567 | 366 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 139 | 265 | IPR005175 | - | |
Bma04g00567 | 366 | CDD | DUF296 | 138 | 264 | IPR005175 | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 300 | 366 | - | - | |
Bma04g00567 | 366 | Gene3D | - | 139 | 282 | - | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 43 | 79 | - | - | |
Bma04g00567 | 366 | ProSiteProfiles | PPC domain profile profile. | 134 | 286 | IPR005175 | - | |
Bma04g00567 | 366 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 18 | 361 | IPR039605 | GO:0003680 | |
Bma04g00567 | 366 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 18 | 361 | - | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 92 | 112 | - | - | |
Bma04g00567 | 366 | MobiDBLite | consensus disorder prediction | 300 | 321 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01960 | Bma-Chr1:72759606 | Bma04g00567 | Bma-Chr4:5132139 | 0 | dispersed | |
Bma04g00567 | Bma-Chr4:5132139 | Bma12g00188 | Bma-Chr12:2557149 | 3.32E-72 | dispersed | |
Bma01g01969 | Bma-Chr1:73398310 | Bma04g00567 | Bma-Chr4:5132139 | 1.32E-179 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00567 | - | - | tcc:18598144 | 390.963 |