Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00574 | ATGAGATCTTCTCGATCAAATTACAAGATGAGTGACAAAGATCAATCACTCCTTTCTATGAAAGTGGGACATAAAGGTTTTCTAAAGAATGACATCAATAAACTTTTCGAGGCAATGGATCTCAAACAATCTAAGAGTTTGGATCTTTCACAGTTAGGCAAAGGTCCAATGAGAAATAATTTCAAACTCCCAGTTACAACAGGTGTGACTCGTTCACCTGGAGCAGAGATAACTGAAACAGTGAATCTGAAGCAAGCATTAAGGGAGTTTTCCCTGACGAAGGCATCCGAAATGGCTGCTATGAAACGGCTATCAAAGTTAGCTAGCACATCTAGAGCCTCAGAAGCTGGACGAATTACAACATTGTATGATTCAGTTGTTATTGAAGCTAGTTATTCTAGCCCATCCTTCAATGATATGAGGAGAAAGGTAGTCCAAAAGTCAATGGAAATAGAGGAAGGCACATCAAAATCCAAGAAGATTTCCGACAATGTTGACGTACCTTCGGTTCAATCATCTAGCAAAAGTCCGCATTCTTCTCCTCGATTAGCTGGTATGGCGACACAGCACGGTCCTGAGATGACTCGAGAAAGAAATGAGAATGTGTCTGTGACAAGGAAAGTTGGGACTATTACACAACAAGAGAAACATTCATCCTCTCCATCTTGTTCGACCTCTACTGTTTATATTGGAGAAGAGGATGAAAGCATTCATTCTTCAAGCAAAGTAGTGAAGAAAGTGTCAATATCAAAGCCACTTCGGAAAGGCAGGTTGCAAACTGCAACATCATCTCATCTGGTAAAAGGAAACAGGGTAGGAAAATTATCTAGAAATACAACCAGGCCGATCAAGCCAGTTATTAGGAGCAAGGGAATTTCAAAGAAAAAAATGAAAGAGGATACAAGTGCCGCTACTTGCACTTCTAGTAATTATAACGAAGTAAATGGTGATGCAGATCCTAGTTCACGACAGTTGGTCTGTGAGCGGTGCCAATGTGCTATGAATAATGCAGGCAAGGAATCAAAAGATTCTTTGGCTTCTCTGTCTAACCATGTTGCCACTGAAGTAATTTCAAGTAATGGAAAATCCGGTGTTTGCAAAACTGTCACCACATTTGATGGCTATAATAGTAGCAAAGCTGCGATAGTGAAAGTGAAAAAGATCATAAGAGTAACAGATAAGGGTGACTTTTCGCAAAGCTCAAAAAGTAGCCAAGGTGAGTACAGTAGCAGTACTACTAGTATCAGTGACGAGAGCAATGTAAGTGGGTCCAGTTGTGGTAACAGACCCCACATGGCGAAGGATGTCAGGTGGAAAGCCATACGTCAAGTAAGAACGGAGCAGGGAGTCCTCGGCTTAACACACTTCAATCTATTAAAGAAGCTTGGTTGTGGAGATATTGGAACTGTGTATCTTGCTGAGCTGATTGGTGCTAACTGTTTATTTGCCATAAAAGTTATGGACAATGAATTTTTAGCTAAAAGAAAGAAAATGCCAAGGGCTCAAACTGAAAGAGAAATTCTTAGAATGTTGGATCATCCTTTTCTTCCCACACTTTATGCCCAGTTTACATCAGATAATTTATCCTGTCTGGTAATGGAGTATTGTCCAGGAGGAGATCTTCATGTACTTCGACAGAAACAGCCCGGCAGGATTTTTACTGAAACAGCTGCCAGGTTCTACGTTGCCGAAGTCCTGCTTGCTCTAGAGTATCTGCACATGCTTGGAGTTGTTTATCGAGATTTGAAACCAGAAAACATTCTCGTCCGAGAAGATGGTCATATTATGCTCACGGATTTCGACCTTTCACTCAGGTGCACTGTCAATCCAACTCTTCTAAAATCATCTTCCGTCAATGGTGATCCTGCAAGAGTCTCGGGTCCATGTACAGAATCTAATTGTGTCGAGCCCTTCTGCATTGAACCGCCCTGTCAAGTTCCGTGCTTCAGTCCCAGGTTTCTACCTGCATCTGCCAAAGCAAGGAAGTTAAAATCCGAGCTTGCAAACCAGGTAAGATCATTACCTCAACTTATCGCCGAACCGACTGAGGCTCGATCTAATTCCTTTGTTGGAACCCACGAATACTTGGCTCCTGAGATTATTAAAGGAGACGGACATGGGGCTGCTGTTGATTGGTGGACTTTTGGGGTGTTTCTTTACGAGCTTCTCTACGGTAAAACACCTTTCAAAGGTTGCAACAATGAAGAAACCTTAGCCAATGTTGTGTTACAGAGCCTCAAATTTCCTGACAGCCCTAGCGCTCTTGGATTGATTGGGCTTGCACCATCTAAGAAGAGGAAAATCCAGATTCTTAAAAACGTTAGTGGAATCATCAATCCTTCCAGGATGACGCTACTTCTGGGTCCTCCCGGAGCCGGAAAAACTACGTTGTTGCTTGCACTTGCTGGAAAACTCGATAAAGATCTAAGGGAAAGCGGGAGAATTACGTACTGCGGCCATGAAATCAATGAGTTTATTCCTCAAAGGACTTCTGCTTATATCAGTCAACATGATCTTCATTATGGCGAAATGACGGTGAGGGAGACTCTAGATTTCTCCGGACGCTGTTTGGGTGTCGGGACGAGATATGATTTGTTGGTCGAACTGTCAAGAAGAGAGAAAGAGGCAGGAATTAAGCCTGATCCTGAAATTGATGCTTTCATGAAGGCAACTTCTCTTTCAGGCCAAGAGACCAGCTTGGTTACAGATTATGTTCTTAAGATTCTGGGACTGGATATTTGTGCTGATACCATTGTCGGAAGCGAGATGAAAAGAGGAATCTCCGGTGGACAGAAGAAACGTGTAACGACAGGGGAGATGCTGGTGGGGCCTGCTAAAGCGTTATTTATGGATGAAATATCGACGGGGCTGGACAGTTCGACAACTTATCAAATTTGCAAATTCATGAGGCAAATGGTTCATGTCATGGATGTGACAATGATCATTGCTCTTCTGCAGCCAGCTCCAGAAACATTCGATATTTTCGACGATGTAATTCTTCTTTCAGAAGGACAAATTGTGTACCAAGGCCCTCGGGAAAATATCCTCAATTTCTTTGAATTCATGGGATTCAAGTGCCCGGACAGGAAAGGAGTTGCAGACTTCTTACAAGAAGTTACATCGAAGAAAGATCAAGAACAATACTGGTTTAGAAAGAACCAACCATATCAATTCATTTCTGTTCCTGAATTCGTGCAGGGGTTTAGCTCATTTCAAATTGGCCAGAAGCTTTCGAATGATCTTCGAGTTCCTTACGACAAATCAAAAACTCATCCGGCTGCATTAGTGACGGAGAAATACGGTATATCAAACTTGGAACTTTTTAAGGCCTGCTTTGCCAGAGAGGTGCTGCTAATGAAGCGAAACTCTTTTGTTTACATATTCAAGACGACGCAGATTACGATCATGTCGTTAATCGCCATGACTGTATTCTTTAGGACCGAAATGAAAGTAGGAACTGTGCAAGATGGGGGGAAATTTTTTGGAGCTTTGTTTTTCAGTCTCATCAATGTCATGTTTAATGGAATGGCAGAATTGGCTATGACTGTCTTCAGGCTTCCTGTGTTCTATAAACAGAGAGATTTCTTGTTCTTCCCTGCTTGGGCTTTTGCATTGCCTATTTGGGTGCTTAGAATTCCCCTGTCTTTTCTCGAATCCGCTATATGGATCATTTTAACTTACTACACCATCGGATTCGCTCCGGCGGCTTCCAGGTTTTTCCGACAGTTTTTGGCGTTTTTCGGAATTCATCAAATGGCTCTCTCCTTATTTCGATTCATCGCCGCACTTGGAAGAACAGAAGTAGTTGCAAATACACTCGGAACCTTCACTTTGCTGTTGGTGTTTGTGTTGGGAGGTTTCATTATTTCGAAAAATGATATTGCCGACTGGATGCTATGGGGATACTACGTTTCTCCTATGATGTACGGACAGAACGCCATTGTCATTAATGAATTCTTAGACGAAAGATGGAACATTGAAATGAGGAACCAAGGTTTAACCGAGGATCGCCTTCAATTACTACGGGATGTAAGTGGTGCTTTCCAGCCTGGGGTATTGACAGCACTTGTCGGGGTCAGTGGTGCCGGAAAAACCACTCTAATGGACGTCTTGGCCGGAAGAAAAACCGGTGGATACATCGAAGGAGATATCAGCATCTCCGGCTACCCAAAGAACCAATCGACATTTGCTAGAGTTACCGGTTATTGTGAGCAAAACGACATTCATTCACCTCATGTGACAGTCTACGAGTCACTCCTTTACTCGGCTTGGCTCCGTCTTCCATCAAACGTCGATGAAAAGAAAAGAAAGATGTTTGTGGAGGAAGTAATGCAACTGGTGGAGCTTACTTCTTTGAGAAATGCCTTGGTCGGTCTTCCTGGAGTAGACGGTCTTTCGACAGAGCAGAGGAAGAGGCTCACCATAGCCGTTGAGCTGGTTGCTAATCCGTCCATTATTTTCATGGACGAACCAACCTCCGGCCTCGATGCTCGAGCCGCTGCCATTGTTATGCGAACCGTGAGAAACACTGTTGACACGGGAAGAACGGTGGTTTGCACAATTCACCAGCCTAGCATAGACATTTTCGAAGCCTTCGACGACCTTCTTCTCATGAAACGCGGAGGAGAAGTCATTTATGCCGGACCCCTTGGCCGACACTCATATAAACTCGTCGAATACTTTGAAGCTGTGTTGGGGGTTACAAAGATTAAGGATGGGTACAATCCTGCTACATGGATGCTTGACGTGACGACTCCACACGTCGAAACTCAATTGGGCGTTAACTTTGCGGAAATTTATGCAAACTCCTCCCTTTATCAGAGAAACCAAGTACTTATAAAAGAACTTAGTACGCCAAAAGAGGGATCCAAGGACCTGTTTTTCCCTACCCAATACTCCCAACCATCCATTGTTCAGTTCAAAGCTTGTTTCTGGAAACAGTACTGGTCTTACTGGAGAAACCCTCAGTACAATGCTGTTCGGTTTTTCATGACAATCGTCATCGGTTGCTTGTTTGGTCTCATTTTCTGGGACAAAGGAACCAAAACATCAAAACAGCAAGATCTGATGAATCTGATAGGAGCTATGTATGCTGCCATTCTTTTCCTCGGAGCATCAAATGCCTCGGCTGTGCAACCGATTGTTTCAATTGCCAGAACTGTTTTTTACCGAGAGAGAGCGGCCGGGATGTACTCGCCGCTGCCTTACGCATTTGCTCAGGTGGCCATAGAGGCAATCTACAATCTAATCCAAACTTTTATCTACTGCATTCTACTTTACTCGATGATGGGGTTCGAATGGAAGGTCGGGAAATTGTGGTGGTTTTATTACTACATATTGATGAGCTTTGTCTACTTCACATTGTATGGGATGATGGTTGTTGCTTTAACTCCGGGGCATCAGATTGCCTCCATTGCCATGGCCTTCTTCCTCAGCTTCTGGAACTTGTTCTCTGGATTTCTCATTCCTAGAACGCAAATTCCGATCTGGTGGAGATGGTACTACTGGGCATCTCCGGTGGCGTGGACGATCTATGGCCTCATCACCTCTCAAATCGGAGACATTAATGAAGACCTTGAAATTCCTGGAAGTGCGGATGTGCCATTGAAAGACTTCCTTAAAGAAAGCTTCGGCTATGACTATGACTTTCTCCCCTACGTCGCCTTGGCCCATCTTGGCTGGGTTTTGCTCTTCTTCTTCTGCTTTGCTTACGGCATCAAGTTCCTCAACTTCCAGAACCGATGA | 5745 | 43.59 | MRSSRSNYKMSDKDQSLLSMKVGHKGFLKNDINKLFEAMDLKQSKSLDLSQLGKGPMRNNFKLPVTTGVTRSPGAEITETVNLKQALREFSLTKASEMAAMKRLSKLASTSRASEAGRITTLYDSVVIEASYSSPSFNDMRRKVVQKSMEIEEGTSKSKKISDNVDVPSVQSSSKSPHSSPRLAGMATQHGPEMTRERNENVSVTRKVGTITQQEKHSSSPSCSTSTVYIGEEDESIHSSSKVVKKVSISKPLRKGRLQTATSSHLVKGNRVGKLSRNTTRPIKPVIRSKGISKKKMKEDTSAATCTSSNYNEVNGDADPSSRQLVCERCQCAMNNAGKESKDSLASLSNHVATEVISSNGKSGVCKTVTTFDGYNSSKAAIVKVKKIIRVTDKGDFSQSSKSSQGEYSSSTTSISDESNVSGSSCGNRPHMAKDVRWKAIRQVRTEQGVLGLTHFNLLKKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLAKRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRIFTETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSVNGDPARVSGPCTESNCVEPFCIEPPCQVPCFSPRFLPASAKARKLKSELANQVRSLPQLIAEPTEARSNSFVGTHEYLAPEIIKGDGHGAAVDWWTFGVFLYELLYGKTPFKGCNNEETLANVVLQSLKFPDSPSALGLIGLAPSKKRKIQILKNVSGIINPSRMTLLLGPPGAGKTTLLLALAGKLDKDLRESGRITYCGHEINEFIPQRTSAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYDLLVELSRREKEAGIKPDPEIDAFMKATSLSGQETSLVTDYVLKILGLDICADTIVGSEMKRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTYQICKFMRQMVHVMDVTMIIALLQPAPETFDIFDDVILLSEGQIVYQGPRENILNFFEFMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKNQPYQFISVPEFVQGFSSFQIGQKLSNDLRVPYDKSKTHPAALVTEKYGISNLELFKACFAREVLLMKRNSFVYIFKTTQITIMSLIAMTVFFRTEMKVGTVQDGGKFFGALFFSLINVMFNGMAELAMTVFRLPVFYKQRDFLFFPAWAFALPIWVLRIPLSFLESAIWIILTYYTIGFAPAASRFFRQFLAFFGIHQMALSLFRFIAALGRTEVVANTLGTFTLLLVFVLGGFIISKNDIADWMLWGYYVSPMMYGQNAIVINEFLDERWNIEMRNQGLTEDRLQLLRDVSGAFQPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKNQSTFARVTGYCEQNDIHSPHVTVYESLLYSAWLRLPSNVDEKKRKMFVEEVMQLVELTSLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDDLLLMKRGGEVIYAGPLGRHSYKLVEYFEAVLGVTKIKDGYNPATWMLDVTTPHVETQLGVNFAEIYANSSLYQRNQVLIKELSTPKEGSKDLFFPTQYSQPSIVQFKACFWKQYWSYWRNPQYNAVRFFMTIVIGCLFGLIFWDKGTKTSKQQDLMNLIGAMYAAILFLGASNASAVQPIVSIARTVFYRERAAGMYSPLPYAFAQVAIEAIYNLIQTFIYCILLYSMMGFEWKVGKLWWFYYYILMSFVYFTLYGMMVVALTPGHQIASIAMAFFLSFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLITSQIGDINEDLEIPGSADVPLKDFLKESFGYDYDFLPYVALAHLGWVLLFFFCFAYGIKFLNFQNR | 1914 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5221904 | 5236025 | - | Bma019058.1 | Bma04g00574 | 80943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00574 | 1914 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 755 | 1028 | IPR003439 | GO:0005524 | |
Bma04g00574 | 1914 | SMART | serkin_6 | 456 | 778 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma04g00574 | 1914 | ProSiteProfiles | Protein kinase domain profile. | 456 | 826 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma04g00574 | 1914 | Pfam | ABC transporter | 1341 | 1493 | IPR003439 | GO:0005524 | |
Bma04g00574 | 1914 | Gene3D | - | 763 | 1060 | IPR027417 | - | |
Bma04g00574 | 1914 | Pfam | ABC transporter | 771 | 953 | IPR003439 | GO:0005524 | |
Bma04g00574 | 1914 | Pfam | ABC-2 type transporter | 1107 | 1319 | IPR013525 | GO:0016020|GO:0140359 | |
Bma04g00574 | 1914 | Pfam | ABC-2 type transporter | 1639 | 1851 | IPR013525 | GO:0016020|GO:0140359 | |
Bma04g00574 | 1914 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 767 | 1028 | IPR027417 | - | |
Bma04g00574 | 1914 | SMART | AAA_5 | 780 | 1005 | IPR003593 | - | |
Bma04g00574 | 1914 | SMART | AAA_5 | 1350 | 1542 | IPR003593 | - | |
Bma04g00574 | 1914 | Gene3D | Phosphorylase Kinase; domain 1 | 455 | 539 | - | - | |
Bma04g00574 | 1914 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 34-RELATED | 737 | 1325 | - | - | |
Bma04g00574 | 1914 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 34-RELATED | 1327 | 1914 | - | - | |
Bma04g00574 | 1914 | CDD | ABCG_PDR_domain2 | 1336 | 1548 | IPR034003 | - | |
Bma04g00574 | 1914 | SUPERFAMILY | Protein kinase-like (PK-like) | 436 | 753 | IPR011009 | - | |
Bma04g00574 | 1914 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1326 | 1565 | IPR003439 | GO:0005524 | |
Bma04g00574 | 1914 | MobiDBLite | consensus disorder prediction | 161 | 183 | - | - | |
Bma04g00574 | 1914 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 577 | 589 | IPR008271 | GO:0004672|GO:0006468 | |
Bma04g00574 | 1914 | MobiDBLite | consensus disorder prediction | 396 | 427 | - | - | |
Bma04g00574 | 1914 | MobiDBLite | consensus disorder prediction | 148 | 203 | - | - | |
Bma04g00574 | 1914 | Gene3D | Transferase(Phosphotransferase) domain 1 | 684 | 752 | - | - | |
Bma04g00574 | 1914 | Pfam | Protein kinase domain | 686 | 744 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma04g00574 | 1914 | Pfam | Protein kinase domain | 457 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma04g00574 | 1914 | Gene3D | - | 1325 | 1559 | IPR027417 | - | |
Bma04g00574 | 1914 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1326 | 1549 | IPR027417 | - | |
Bma04g00574 | 1914 | Gene3D | Transferase(Phosphotransferase) domain 1 | 540 | 607 | - | - | |
Bma04g00574 | 1914 | Pfam | ABC-2 type transporter | 986 | 1038 | IPR043926 | GO:0140359 | |
Bma04g00574 | 1914 | Pfam | ABC-2 type transporter | 1522 | 1591 | IPR043926 | GO:0140359 | |
Bma04g00574 | 1914 | MobiDBLite | consensus disorder prediction | 396 | 430 | - | - | |
Bma04g00574 | 1914 | CDD | ABCG_PDR_domain1 | 760 | 1010 | IPR034001 | - | |
Bma04g00574 | 1914 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 737 | 1325 | - | - | |
Bma04g00574 | 1914 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 1327 | 1914 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00574 | Bma-Chr4:5221904 | Bma10g00084 | Bma-Chr10:838723 | 7.23E-08 | dispersed | |
Bma13g01124 | Bma-Chr13:44342261 | Bma04g00574 | Bma-Chr4:5221904 | 1.43E-157 | dispersed | |
Bma14g00904 | Bma-Chr14:10219310 | Bma04g00574 | Bma-Chr4:5221904 | 4.21E-162 | dispersed | |
Bma10g00001 | Bma-Chr10:124692 | Bma04g00574 | Bma-Chr4:5221904 | 1.78E-120 | transposed | |
Bma11g00217 | Bma-Chr11:1923390 | Bma04g00574 | Bma-Chr4:5221904 | 4.69E-169 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66447 | PF01061 | ABC2_membrane | 4.10E-54 | CL0181 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00574 | K08711 | - | qsu:111996739 | 1562.74 |