Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00574 ATGAGATCTTCTCGATCAAATTACAAGATGAGTGACAAAGATCAATCACTCCTTTCTATGAAAGTGGGACATAAAGGTTTTCTAAAGAATGACATCAATAAACTTTTCGAGGCAATGGATCTCAAACAATCTAAGAGTTTGGATCTTTCACAGTTAGGCAAAGGTCCAATGAGAAATAATTTCAAACTCCCAGTTACAACAGGTGTGACTCGTTCACCTGGAGCAGAGATAACTGAAACAGTGAATCTGAAGCAAGCATTAAGGGAGTTTTCCCTGACGAAGGCATCCGAAATGGCTGCTATGAAACGGCTATCAAAGTTAGCTAGCACATCTAGAGCCTCAGAAGCTGGACGAATTACAACATTGTATGATTCAGTTGTTATTGAAGCTAGTTATTCTAGCCCATCCTTCAATGATATGAGGAGAAAGGTAGTCCAAAAGTCAATGGAAATAGAGGAAGGCACATCAAAATCCAAGAAGATTTCCGACAATGTTGACGTACCTTCGGTTCAATCATCTAGCAAAAGTCCGCATTCTTCTCCTCGATTAGCTGGTATGGCGACACAGCACGGTCCTGAGATGACTCGAGAAAGAAATGAGAATGTGTCTGTGACAAGGAAAGTTGGGACTATTACACAACAAGAGAAACATTCATCCTCTCCATCTTGTTCGACCTCTACTGTTTATATTGGAGAAGAGGATGAAAGCATTCATTCTTCAAGCAAAGTAGTGAAGAAAGTGTCAATATCAAAGCCACTTCGGAAAGGCAGGTTGCAAACTGCAACATCATCTCATCTGGTAAAAGGAAACAGGGTAGGAAAATTATCTAGAAATACAACCAGGCCGATCAAGCCAGTTATTAGGAGCAAGGGAATTTCAAAGAAAAAAATGAAAGAGGATACAAGTGCCGCTACTTGCACTTCTAGTAATTATAACGAAGTAAATGGTGATGCAGATCCTAGTTCACGACAGTTGGTCTGTGAGCGGTGCCAATGTGCTATGAATAATGCAGGCAAGGAATCAAAAGATTCTTTGGCTTCTCTGTCTAACCATGTTGCCACTGAAGTAATTTCAAGTAATGGAAAATCCGGTGTTTGCAAAACTGTCACCACATTTGATGGCTATAATAGTAGCAAAGCTGCGATAGTGAAAGTGAAAAAGATCATAAGAGTAACAGATAAGGGTGACTTTTCGCAAAGCTCAAAAAGTAGCCAAGGTGAGTACAGTAGCAGTACTACTAGTATCAGTGACGAGAGCAATGTAAGTGGGTCCAGTTGTGGTAACAGACCCCACATGGCGAAGGATGTCAGGTGGAAAGCCATACGTCAAGTAAGAACGGAGCAGGGAGTCCTCGGCTTAACACACTTCAATCTATTAAAGAAGCTTGGTTGTGGAGATATTGGAACTGTGTATCTTGCTGAGCTGATTGGTGCTAACTGTTTATTTGCCATAAAAGTTATGGACAATGAATTTTTAGCTAAAAGAAAGAAAATGCCAAGGGCTCAAACTGAAAGAGAAATTCTTAGAATGTTGGATCATCCTTTTCTTCCCACACTTTATGCCCAGTTTACATCAGATAATTTATCCTGTCTGGTAATGGAGTATTGTCCAGGAGGAGATCTTCATGTACTTCGACAGAAACAGCCCGGCAGGATTTTTACTGAAACAGCTGCCAGGTTCTACGTTGCCGAAGTCCTGCTTGCTCTAGAGTATCTGCACATGCTTGGAGTTGTTTATCGAGATTTGAAACCAGAAAACATTCTCGTCCGAGAAGATGGTCATATTATGCTCACGGATTTCGACCTTTCACTCAGGTGCACTGTCAATCCAACTCTTCTAAAATCATCTTCCGTCAATGGTGATCCTGCAAGAGTCTCGGGTCCATGTACAGAATCTAATTGTGTCGAGCCCTTCTGCATTGAACCGCCCTGTCAAGTTCCGTGCTTCAGTCCCAGGTTTCTACCTGCATCTGCCAAAGCAAGGAAGTTAAAATCCGAGCTTGCAAACCAGGTAAGATCATTACCTCAACTTATCGCCGAACCGACTGAGGCTCGATCTAATTCCTTTGTTGGAACCCACGAATACTTGGCTCCTGAGATTATTAAAGGAGACGGACATGGGGCTGCTGTTGATTGGTGGACTTTTGGGGTGTTTCTTTACGAGCTTCTCTACGGTAAAACACCTTTCAAAGGTTGCAACAATGAAGAAACCTTAGCCAATGTTGTGTTACAGAGCCTCAAATTTCCTGACAGCCCTAGCGCTCTTGGATTGATTGGGCTTGCACCATCTAAGAAGAGGAAAATCCAGATTCTTAAAAACGTTAGTGGAATCATCAATCCTTCCAGGATGACGCTACTTCTGGGTCCTCCCGGAGCCGGAAAAACTACGTTGTTGCTTGCACTTGCTGGAAAACTCGATAAAGATCTAAGGGAAAGCGGGAGAATTACGTACTGCGGCCATGAAATCAATGAGTTTATTCCTCAAAGGACTTCTGCTTATATCAGTCAACATGATCTTCATTATGGCGAAATGACGGTGAGGGAGACTCTAGATTTCTCCGGACGCTGTTTGGGTGTCGGGACGAGATATGATTTGTTGGTCGAACTGTCAAGAAGAGAGAAAGAGGCAGGAATTAAGCCTGATCCTGAAATTGATGCTTTCATGAAGGCAACTTCTCTTTCAGGCCAAGAGACCAGCTTGGTTACAGATTATGTTCTTAAGATTCTGGGACTGGATATTTGTGCTGATACCATTGTCGGAAGCGAGATGAAAAGAGGAATCTCCGGTGGACAGAAGAAACGTGTAACGACAGGGGAGATGCTGGTGGGGCCTGCTAAAGCGTTATTTATGGATGAAATATCGACGGGGCTGGACAGTTCGACAACTTATCAAATTTGCAAATTCATGAGGCAAATGGTTCATGTCATGGATGTGACAATGATCATTGCTCTTCTGCAGCCAGCTCCAGAAACATTCGATATTTTCGACGATGTAATTCTTCTTTCAGAAGGACAAATTGTGTACCAAGGCCCTCGGGAAAATATCCTCAATTTCTTTGAATTCATGGGATTCAAGTGCCCGGACAGGAAAGGAGTTGCAGACTTCTTACAAGAAGTTACATCGAAGAAAGATCAAGAACAATACTGGTTTAGAAAGAACCAACCATATCAATTCATTTCTGTTCCTGAATTCGTGCAGGGGTTTAGCTCATTTCAAATTGGCCAGAAGCTTTCGAATGATCTTCGAGTTCCTTACGACAAATCAAAAACTCATCCGGCTGCATTAGTGACGGAGAAATACGGTATATCAAACTTGGAACTTTTTAAGGCCTGCTTTGCCAGAGAGGTGCTGCTAATGAAGCGAAACTCTTTTGTTTACATATTCAAGACGACGCAGATTACGATCATGTCGTTAATCGCCATGACTGTATTCTTTAGGACCGAAATGAAAGTAGGAACTGTGCAAGATGGGGGGAAATTTTTTGGAGCTTTGTTTTTCAGTCTCATCAATGTCATGTTTAATGGAATGGCAGAATTGGCTATGACTGTCTTCAGGCTTCCTGTGTTCTATAAACAGAGAGATTTCTTGTTCTTCCCTGCTTGGGCTTTTGCATTGCCTATTTGGGTGCTTAGAATTCCCCTGTCTTTTCTCGAATCCGCTATATGGATCATTTTAACTTACTACACCATCGGATTCGCTCCGGCGGCTTCCAGGTTTTTCCGACAGTTTTTGGCGTTTTTCGGAATTCATCAAATGGCTCTCTCCTTATTTCGATTCATCGCCGCACTTGGAAGAACAGAAGTAGTTGCAAATACACTCGGAACCTTCACTTTGCTGTTGGTGTTTGTGTTGGGAGGTTTCATTATTTCGAAAAATGATATTGCCGACTGGATGCTATGGGGATACTACGTTTCTCCTATGATGTACGGACAGAACGCCATTGTCATTAATGAATTCTTAGACGAAAGATGGAACATTGAAATGAGGAACCAAGGTTTAACCGAGGATCGCCTTCAATTACTACGGGATGTAAGTGGTGCTTTCCAGCCTGGGGTATTGACAGCACTTGTCGGGGTCAGTGGTGCCGGAAAAACCACTCTAATGGACGTCTTGGCCGGAAGAAAAACCGGTGGATACATCGAAGGAGATATCAGCATCTCCGGCTACCCAAAGAACCAATCGACATTTGCTAGAGTTACCGGTTATTGTGAGCAAAACGACATTCATTCACCTCATGTGACAGTCTACGAGTCACTCCTTTACTCGGCTTGGCTCCGTCTTCCATCAAACGTCGATGAAAAGAAAAGAAAGATGTTTGTGGAGGAAGTAATGCAACTGGTGGAGCTTACTTCTTTGAGAAATGCCTTGGTCGGTCTTCCTGGAGTAGACGGTCTTTCGACAGAGCAGAGGAAGAGGCTCACCATAGCCGTTGAGCTGGTTGCTAATCCGTCCATTATTTTCATGGACGAACCAACCTCCGGCCTCGATGCTCGAGCCGCTGCCATTGTTATGCGAACCGTGAGAAACACTGTTGACACGGGAAGAACGGTGGTTTGCACAATTCACCAGCCTAGCATAGACATTTTCGAAGCCTTCGACGACCTTCTTCTCATGAAACGCGGAGGAGAAGTCATTTATGCCGGACCCCTTGGCCGACACTCATATAAACTCGTCGAATACTTTGAAGCTGTGTTGGGGGTTACAAAGATTAAGGATGGGTACAATCCTGCTACATGGATGCTTGACGTGACGACTCCACACGTCGAAACTCAATTGGGCGTTAACTTTGCGGAAATTTATGCAAACTCCTCCCTTTATCAGAGAAACCAAGTACTTATAAAAGAACTTAGTACGCCAAAAGAGGGATCCAAGGACCTGTTTTTCCCTACCCAATACTCCCAACCATCCATTGTTCAGTTCAAAGCTTGTTTCTGGAAACAGTACTGGTCTTACTGGAGAAACCCTCAGTACAATGCTGTTCGGTTTTTCATGACAATCGTCATCGGTTGCTTGTTTGGTCTCATTTTCTGGGACAAAGGAACCAAAACATCAAAACAGCAAGATCTGATGAATCTGATAGGAGCTATGTATGCTGCCATTCTTTTCCTCGGAGCATCAAATGCCTCGGCTGTGCAACCGATTGTTTCAATTGCCAGAACTGTTTTTTACCGAGAGAGAGCGGCCGGGATGTACTCGCCGCTGCCTTACGCATTTGCTCAGGTGGCCATAGAGGCAATCTACAATCTAATCCAAACTTTTATCTACTGCATTCTACTTTACTCGATGATGGGGTTCGAATGGAAGGTCGGGAAATTGTGGTGGTTTTATTACTACATATTGATGAGCTTTGTCTACTTCACATTGTATGGGATGATGGTTGTTGCTTTAACTCCGGGGCATCAGATTGCCTCCATTGCCATGGCCTTCTTCCTCAGCTTCTGGAACTTGTTCTCTGGATTTCTCATTCCTAGAACGCAAATTCCGATCTGGTGGAGATGGTACTACTGGGCATCTCCGGTGGCGTGGACGATCTATGGCCTCATCACCTCTCAAATCGGAGACATTAATGAAGACCTTGAAATTCCTGGAAGTGCGGATGTGCCATTGAAAGACTTCCTTAAAGAAAGCTTCGGCTATGACTATGACTTTCTCCCCTACGTCGCCTTGGCCCATCTTGGCTGGGTTTTGCTCTTCTTCTTCTGCTTTGCTTACGGCATCAAGTTCCTCAACTTCCAGAACCGATGA 5745 43.59 MRSSRSNYKMSDKDQSLLSMKVGHKGFLKNDINKLFEAMDLKQSKSLDLSQLGKGPMRNNFKLPVTTGVTRSPGAEITETVNLKQALREFSLTKASEMAAMKRLSKLASTSRASEAGRITTLYDSVVIEASYSSPSFNDMRRKVVQKSMEIEEGTSKSKKISDNVDVPSVQSSSKSPHSSPRLAGMATQHGPEMTRERNENVSVTRKVGTITQQEKHSSSPSCSTSTVYIGEEDESIHSSSKVVKKVSISKPLRKGRLQTATSSHLVKGNRVGKLSRNTTRPIKPVIRSKGISKKKMKEDTSAATCTSSNYNEVNGDADPSSRQLVCERCQCAMNNAGKESKDSLASLSNHVATEVISSNGKSGVCKTVTTFDGYNSSKAAIVKVKKIIRVTDKGDFSQSSKSSQGEYSSSTTSISDESNVSGSSCGNRPHMAKDVRWKAIRQVRTEQGVLGLTHFNLLKKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLAKRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRIFTETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSVNGDPARVSGPCTESNCVEPFCIEPPCQVPCFSPRFLPASAKARKLKSELANQVRSLPQLIAEPTEARSNSFVGTHEYLAPEIIKGDGHGAAVDWWTFGVFLYELLYGKTPFKGCNNEETLANVVLQSLKFPDSPSALGLIGLAPSKKRKIQILKNVSGIINPSRMTLLLGPPGAGKTTLLLALAGKLDKDLRESGRITYCGHEINEFIPQRTSAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYDLLVELSRREKEAGIKPDPEIDAFMKATSLSGQETSLVTDYVLKILGLDICADTIVGSEMKRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTYQICKFMRQMVHVMDVTMIIALLQPAPETFDIFDDVILLSEGQIVYQGPRENILNFFEFMGFKCPDRKGVADFLQEVTSKKDQEQYWFRKNQPYQFISVPEFVQGFSSFQIGQKLSNDLRVPYDKSKTHPAALVTEKYGISNLELFKACFAREVLLMKRNSFVYIFKTTQITIMSLIAMTVFFRTEMKVGTVQDGGKFFGALFFSLINVMFNGMAELAMTVFRLPVFYKQRDFLFFPAWAFALPIWVLRIPLSFLESAIWIILTYYTIGFAPAASRFFRQFLAFFGIHQMALSLFRFIAALGRTEVVANTLGTFTLLLVFVLGGFIISKNDIADWMLWGYYVSPMMYGQNAIVINEFLDERWNIEMRNQGLTEDRLQLLRDVSGAFQPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKNQSTFARVTGYCEQNDIHSPHVTVYESLLYSAWLRLPSNVDEKKRKMFVEEVMQLVELTSLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDDLLLMKRGGEVIYAGPLGRHSYKLVEYFEAVLGVTKIKDGYNPATWMLDVTTPHVETQLGVNFAEIYANSSLYQRNQVLIKELSTPKEGSKDLFFPTQYSQPSIVQFKACFWKQYWSYWRNPQYNAVRFFMTIVIGCLFGLIFWDKGTKTSKQQDLMNLIGAMYAAILFLGASNASAVQPIVSIARTVFYRERAAGMYSPLPYAFAQVAIEAIYNLIQTFIYCILLYSMMGFEWKVGKLWWFYYYILMSFVYFTLYGMMVVALTPGHQIASIAMAFFLSFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLITSQIGDINEDLEIPGSADVPLKDFLKESFGYDYDFLPYVALAHLGWVLLFFFCFAYGIKFLNFQNR 1914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5221904 5236025 - Bma019058.1 Bma04g00574 80943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00574 1914 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 755 1028 IPR003439 GO:0005524
Bma04g00574 1914 SMART serkin_6 456 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00574 1914 ProSiteProfiles Protein kinase domain profile. 456 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00574 1914 Pfam ABC transporter 1341 1493 IPR003439 GO:0005524
Bma04g00574 1914 Gene3D - 763 1060 IPR027417 -
Bma04g00574 1914 Pfam ABC transporter 771 953 IPR003439 GO:0005524
Bma04g00574 1914 Pfam ABC-2 type transporter 1107 1319 IPR013525 GO:0016020|GO:0140359
Bma04g00574 1914 Pfam ABC-2 type transporter 1639 1851 IPR013525 GO:0016020|GO:0140359
Bma04g00574 1914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 1028 IPR027417 -
Bma04g00574 1914 SMART AAA_5 780 1005 IPR003593 -
Bma04g00574 1914 SMART AAA_5 1350 1542 IPR003593 -
Bma04g00574 1914 Gene3D Phosphorylase Kinase; domain 1 455 539 - -
Bma04g00574 1914 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 737 1325 - -
Bma04g00574 1914 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 1327 1914 - -
Bma04g00574 1914 CDD ABCG_PDR_domain2 1336 1548 IPR034003 -
Bma04g00574 1914 SUPERFAMILY Protein kinase-like (PK-like) 436 753 IPR011009 -
Bma04g00574 1914 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1326 1565 IPR003439 GO:0005524
Bma04g00574 1914 MobiDBLite consensus disorder prediction 161 183 - -
Bma04g00574 1914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Bma04g00574 1914 MobiDBLite consensus disorder prediction 396 427 - -
Bma04g00574 1914 MobiDBLite consensus disorder prediction 148 203 - -
Bma04g00574 1914 Gene3D Transferase(Phosphotransferase) domain 1 684 752 - -
Bma04g00574 1914 Pfam Protein kinase domain 686 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00574 1914 Pfam Protein kinase domain 457 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00574 1914 Gene3D - 1325 1559 IPR027417 -
Bma04g00574 1914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1326 1549 IPR027417 -
Bma04g00574 1914 Gene3D Transferase(Phosphotransferase) domain 1 540 607 - -
Bma04g00574 1914 Pfam ABC-2 type transporter 986 1038 IPR043926 GO:0140359
Bma04g00574 1914 Pfam ABC-2 type transporter 1522 1591 IPR043926 GO:0140359
Bma04g00574 1914 MobiDBLite consensus disorder prediction 396 430 - -
Bma04g00574 1914 CDD ABCG_PDR_domain1 760 1010 IPR034001 -
Bma04g00574 1914 PANTHER ATP-BINDING CASSETTE TRANSPORTER 737 1325 - -
Bma04g00574 1914 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1327 1914 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00574 Bma-Chr4:5221904 Bma10g00084 Bma-Chr10:838723 7.23E-08 dispersed
Bma13g01124 Bma-Chr13:44342261 Bma04g00574 Bma-Chr4:5221904 1.43E-157 dispersed
Bma14g00904 Bma-Chr14:10219310 Bma04g00574 Bma-Chr4:5221904 4.21E-162 dispersed
Bma10g00001 Bma-Chr10:124692 Bma04g00574 Bma-Chr4:5221904 1.78E-120 transposed
Bma11g00217 Bma-Chr11:1923390 Bma04g00574 Bma-Chr4:5221904 4.69E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66447 PF01061 ABC2_membrane 4.10E-54 CL0181 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00574 K08711 - qsu:111996739 1562.74