Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00605 ATGGAGACCGTTAAGCCCGACGGATTTAAGAATGGATCATCGGAGAACGGCTCATTGGAAAGCCTGTGCAAGAGCAGCGATCCGTTGAACTGGGGAGCTGCAGCGGAGGCGCTCAAAGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGCGGAGTATCGCCAGCCGGTGATCAACCTCGGAGGGGAGAGTTTGACCATTGCGCAGGTCGCTGCTGTTGCTGGACGGGACTCGGAAGTTTCCGTCGAGCTGTCGGAATCGGCGAGGGCCGGCGTGAAGGCAAGCAGTGACTGGGTGATGGATATTATGAAGCAAGGGACTGATAGCTATGGAGTTACTACTGGGTTTGGTGCAAATTCAAACAGAAGAACTAAAGAGGGTGGAGCTCTACAGAAGGAGCTCATCAGATTCTTGAACGCCGGAATCTTCGGAAACGGAACGGAGTCTTGCCACACATTGCCGCACTCGGCCAGCAGAGCCGCAATGCTTGTAAGAATCAACACCCTCCTCCAGGGCTACTCCGGAATCAGGTTCGAGATTCTGGAAGCCATGACCAAACTTCTCAACAGCAATGTTACTCCGTGTTTGCCTCTTCGTGGTACAATCACTGCCTCCGGTGACCTCGTACCCCTATCCTACATCGTCGGGCTACTCACTGGAAGACCCAACTCCAAAGCCGTTGGCCCTAACGGAGAGTCGCTCACTGCTACGCAGGCGTTCGAGCGTGCCGGTATTAAATCCGGGTTTTTCGAGCTGCAGCCGAAGGAAGGGACGGCACTGGTCAACAGCACCGCCGTGGGATCTGGGTTGGCCTCGGTGGTGCTCTTTGAGGCTAATATTCTCGCTGTGCTGTCTGAGATCCTTTCTGCCATTTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTCACAGATCATTTGACCCATAAATTGAAGCATCATCCTGGTCAAATTGAAGCCGCCGCCATAATGGAGCACATCTTGGACGGAAGCTCATACATCAAAGCCGCAAAAAAGCTTCATGAAATGGATCCTCTTCAGAAACCGAAACAGGATCGCTACGCTCTTCGAACCTCGCCTCAATGGCTCGGCCCTCTAATTGAAGTGATCCGATTCTCAACAAAATCGATTGAAAGAGAAATCAACTCGGTCAACGATAACCCTTTGATCGATGTTTCTCGCAACAAGGCATTACACGGCGGAAACTTCCAAGGAACTCCAATTGGAGTATCCATGGATAATACCCGTTTAGCCATTGCTTCAATCGGGAAGCTGATTTTCGCCCAGTTTTCTGAACTGGTCAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGCGGGCAGAAACCCCAGTTTGGATTACGGGTTCAAAGGAGCTGAAATCGCCATGGCTTCATATTGCTCCGAGCTTCAGTACCTCGCAAATCCAGTAACGACCCATGTCCAAAGTGCAGAGCAGCACAATCAAGACGTCAACTCTCTCGGCCTAATTTCATCCAGAAAAACAGCTGAAGCTATCGATATTTTGAAATTAATGTCCTCCACCTTCCTGATCGCTCTCTGCCAAGCGATCGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACAGTGAAGAACACAATCAGCCAAGTTGCAAAGAAGGTTCTAACCACTGGCGCCAATGGACAGCTCCACCCATCAGGATTCTGCGAGAAGGACTTACTCAAAGTCGTCGACAGAGAATACGTTTTCGCCTACATTGACGATCCCTGCAGTGCAAATTACCCATTAATGCAGAAGCTCAGACAAGTCCTCGTCGAGCACGCGCTCACCAATGGAGAAAGCGAGAAGAACGCAAGCACTTCGATCTTCCAAAAGATTGCCGCGTTTGAAGAAGAGTTACTGGCGATCTTGCCGAAAGAAGTGGAAGCGACAAGGGTGGCAATCGAAAACGGAGGCGCTGCCATCGGAAACCAGATAAAGAACTGCAGATCGTACCCACTGTACAAGTTCGTGAGGGAAGAGCTGGGAACAGGGCTGCTGACAGGGGAGAAAGTGAAGTCCCCCGGCGAAGAATGCGATGTCGTGTTCACGGCTATGTGCGAGGGAAAACTGATCGACCCTATGCTGGCCTGCTTGAGCGACTGGAATGGCGCGCCAATCCCTATCTGCTAG 2157 51.32 METVKPDGFKNGSSENGSLESLCKSSDPLNWGAAAEALKGSHLDEVKRMVAEYRQPVINLGGESLTIAQVAAVAGRDSEVSVELSESARAGVKASSDWVMDIMKQGTDSYGVTTGFGANSNRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFEILEAMTKLLNSNVTPCLPLRGTITASGDLVPLSYIVGLLTGRPNSKAVGPNGESLTATQAFERAGIKSGFFELQPKEGTALVNSTAVGSGLASVVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTISQVAKKVLTTGANGQLHPSGFCEKDLLKVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGESEKNASTSIFQKIAAFEEELLAILPKEVEATRVAIENGGAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPMLACLSDWNGAPIPIC 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5782649 5785035 + Bma019090.1 Bma04g00605 80974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00605 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bma04g00605 718 PANTHER HISTIDINE AMMONIA-LYASE 23 718 IPR001106 -
Bma04g00605 718 Gene3D - 19 264 IPR024083 -
Bma04g00605 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Bma04g00605 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Bma04g00605 718 Pfam Aromatic amino acid lyase 65 540 IPR001106 -
Bma04g00605 718 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 718 - -
Bma04g00605 718 CDD PAL-HAL 63 528 IPR001106 -
Bma04g00605 718 MobiDBLite consensus disorder prediction 1 22 - -
Bma04g00605 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Bma04g00605 718 Gene3D - 531 652 IPR023144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01926 Bma-Chr1:71104066 Bma04g00605 Bma-Chr4:5782649 0 dispersed
Bma04g00605 Bma-Chr4:5782649 Bma08g00933 Bma-Chr8:48345611 0 dispersed
Bma04g00602 Bma-Chr4:5744694 Bma04g00605 Bma-Chr4:5782649 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00605 K10775 - mnt:21407113 1233.78