Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00665 ATGGGAAATCGTATCGGGAAAATTGGCCACTGTTTCGCCGGAGACGGAGATATTTCCAGGCGATATGAAGTCGGAGGCTCTGTGTTCTTACCGGACCCGCTAGACGAGGGTTATGGTCATTCTTTTTGCTACATACGGCCTGAACCTGAGCGGGTGTCGTCTTCCCACAAAGTTTTCTCCGAGGATGACATGCCTCCGATGACGACGTTCAGATCAATCTCGGGTGCCTCTGTTAGCGCCAACAACTCGACACCCCTTTCCACCTCCCTCGCCGATCTTTATCCCTACAGTACGACGTTCGATCGGGCAGCGGCTTTCGATTGTTCAAATTCCTTCGCTTCCATCCCTCTCCAGCCAGTTCCTCGCTATTCAATTTCCGGCAATTCCGTCGGAGTTCTGGGTTCGGGTCCGATTGAGAGAGTGTTTCTTTCGGGTCCTATGGAAAGAAGCTTTACTTCTGGGCCCCTCGATCGCGGGTTAAATTCAGGTTTGATTGCGAAGGGGCTCGATAAACTAGAAAGGAGCTTCTCTCATAATGGATTCGGAGCGAAACCCAGAGTAAAGAAGCGCAGTTTAATTCGGATTTTGAAGAGAGCTTTATCAAAAACAATATCTCGGGGCGGCCCAAAACCTCCAATCCTGCCGACGATTGAAATCGATTCAGCTAAAGAATCAGATTCATTCAAGGACAACGAAAATTTTGTTCCTCAAAATAGTACCAATATGAGAAGCCATGTGAGCTTAATGGACGACGACGAAGAGGGCGATTACTTAATGGGCAGTAAAACGCTTCAGTGGGCGCAAGGAAAAGCCGGCGAGGATCGAGTTCACGTCGTGATTTCTGAAGAGAACGGCTGGGTTTTTGTCGGAATTTATGACGGATTTAATGGACCAGATGCTCCTGATTATTTACTCGCTAATCTCTATACTTCAGTTCGAAAGGAACTCAAGAGATTGATCTGGAATGAAAAGAATGAATCCACTGCTACTTCATCGACATCGATGAATTCGTCAAATTCAAATTCAGCTGAAGAGAACTATACTCCCCAATCGAGTATTGGGAACCCGGATTCGGAAATCGATTCAAACAGGAAAACCAGCGGAATTACGAAGACGACTCAAATTAATGGAGTGGAGGAGAAATGCGAGGGGAATCCAAAATTTTGTAAGTGCGAATGGGAAAGGGAAAGATTAGAGCACGATACGCGATCAATGTGGGACGAATCATCCGCCATTGGTAAATCTGAAGTTCTGAATGCTCTGTCTCAGGCGTTGAGGAAGACGGAGGATGAGTATTTAGAGATTGCAGATAAGAAGGTAACGGTTCATCCAGAGCTAGCTTTAATGGGGTCATGTGTTTTAGTCATGTTGATGAAGGGAGAAGAAGTTTACGTGATGAACGTCGGAGATAGCCGAGCGGTTCTGGCTCAGCAATTAGAACCGGATTTCTTCGTCGGAAATCCTTACAGAGATTTCGAACGGATCAACGAGGGAACTCAACGATCGATCGAATCACTCGAATCGTGTGGCTTGACTTCGATTCAGCTCACAATGGATCACAGCACAGACGTTGAAGAAGAAGTGAAGCGGATAAAGAAGGAACACCCGGATGATGCTTATGCAGTAATGAACGACAGAGTAAAAGGGTATTTGAAGATCACAAGAGCCTTCGGAGCCGGGTTTCTCAAACAGGCCTGTAATTTTGATTTTTTTTTTTTTTTTTTCTGGGTGCAGCCAAAGTGGAACGATGCTCTTCTGGAGATGTTCAGAATAGACTACATCGGAAACTCCCCTTACCTAACCTGCAATCCATCGCTCTATCACTACAAACTGAAGCCAAGAGACAGATTCATAATCCTATCCTCCGATGGCCTCTTCCAATACTTCACCAACGAACAAGCCATCGCCGAGGTCGAGGCCTTCCTCACCGCATTTCCCGAAGGCGATCCCGCTCAGCACCTCATCGAAGCCGTCTTGTTCAGAGCAGCTCGAAAAGCCGGTATGGACTTCCACGAACTGCTTGATATCCCGCAAGGCGAGAGGCGGAAATATCACGATGATGTTTCCGTCATCATCATATCTTTGGAGGGACGACTATGGCGGTCTCTACTGTAA 2115 46.81 MGNRIGKIGHCFAGDGDISRRYEVGGSVFLPDPLDEGYGHSFCYIRPEPERVSSSHKVFSEDDMPPMTTFRSISGASVSANNSTPLSTSLADLYPYSTTFDRAAAFDCSNSFASIPLQPVPRYSISGNSVGVLGSGPIERVFLSGPMERSFTSGPLDRGLNSGLIAKGLDKLERSFSHNGFGAKPRVKKRSLIRILKRALSKTISRGGPKPPILPTIEIDSAKESDSFKDNENFVPQNSTNMRSHVSLMDDDEEGDYLMGSKTLQWAQGKAGEDRVHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYTSVRKELKRLIWNEKNESTATSSTSMNSSNSNSAEENYTPQSSIGNPDSEIDSNRKTSGITKTTQINGVEEKCEGNPKFCKCEWERERLEHDTRSMWDESSAIGKSEVLNALSQALRKTEDEYLEIADKKVTVHPELALMGSCVLVMLMKGEEVYVMNVGDSRAVLAQQLEPDFFVGNPYRDFERINEGTQRSIESLESCGLTSIQLTMDHSTDVEEEVKRIKKEHPDDAYAVMNDRVKGYLKITRAFGAGFLKQACNFDFFFFFFWVQPKWNDALLEMFRIDYIGNSPYLTCNPSLYHYKLKPRDRFIILSSDGLFQYFTNEQAIAEVEAFLTAFPEGDPAQHLIEAVLFRAARKAGMDFHELLDIPQGERRKYHDDVSVIIISLEGRLWRSLL 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6405083 6407540 - Bma019159.1 Bma04g00665 81034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00665 704 Pfam Protein phosphatase 2C 419 643 IPR001932 -
Bma04g00665 704 MobiDBLite consensus disorder prediction 326 372 - -
Bma04g00665 704 Gene3D - 231 700 IPR036457 -
Bma04g00665 704 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 17 702 - -
Bma04g00665 704 ProSiteProfiles PPM-type phosphatase domain profile. 258 695 IPR001932 -
Bma04g00665 704 SMART PP2C_4 246 693 IPR001932 -
Bma04g00665 704 CDD PP2Cc 395 695 IPR001932 -
Bma04g00665 704 SUPERFAMILY PP2C-like 269 696 IPR036457 -
Bma04g00665 704 Coils Coil 418 438 - -
Bma04g00665 704 PANTHER PROTEIN PHOSPHATASE 2C 17 702 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01213 Bma-Chr2:54178395 Bma04g00665 Bma-Chr4:6405083 7.79E-70 dispersed
Bma04g00665 Bma-Chr4:6405083 Bma05g00390 Bma-Chr5:12241464 3.08E-132 dispersed
Bma12g00221 Bma-Chr12:2919914 Bma04g00665 Bma-Chr4:6405083 4.47E-81 transposed
Bma11g00119 Bma-Chr11:1139330 Bma04g00665 Bma-Chr4:6405083 0 wgd
Bma04g00665 Bma-Chr4:6405083 Bma07g00102 Bma-Chr7:1758738 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00665 - - bhj:120069881 848.195