Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00671 | ATAATGGGCGCCGTAACTTTGCTCTGCTCTATTTCACTAGTGTTGCTGTTGGCGGTGGTCGATGCTAGAATCCCCGGAGTTTACTCCGGTGGTGCATGGGAGGGCGCACACGCTACTTTCTACGGCGGCAGTGACGCCTCCGGAACAATGGGCGGTGCTTGTGGGTATGGAAACCTGTACAGCCAAGGCTACGGAGTAAGCACTGCGGCACTGAGCACTGCTCTGTTCAACAGCGGGCTCAGTTGCGGTGCCTGCTTTGAGATTAAGTGCGCCGACGACCCAAAATGGTGTCACCCGGGTAACCCATCCATCTTCATCACCGCCACCAATTTCTGCCCTCCTAACTTCGCTCTACCTAACGACAATGGCGGCTGGTGCAACCCTCCCCGTCCCCATTTCGACCTCGCCATGCCAATGTTCCTCAAGATCGCCGAGTACCGCGCAGGAATAGTCCCTGTTTCCTTCCGCCGGGTGGCATGCAGAAAGGCAGGGGGAATCAGGTTCACGATCAACGGCTTCCGTTACTTCAACCTGGTTCTGATCACAAACGTCGCCGGTGCAGGTGATATCGTGCGCGTCAGCGTCAAGGGCGGAAACACTGGCTGGATGACCATGAGCCGGAACTGGGGGCAAAACTGGCAATCTAATTCCGCCTTGGTGGGCCAAACTCTTTCCTTTAGAGTCACGGGCAGTGACGGACGCACCTCTACGTCATGGAACGTGGCGCCATCCAATTGGAAGTTCGGTCAGACTTTCAGCGGGAAGAATTTCCGCGTC | 777 | 56.5 | IMGAVTLLCSISLVLLLAVVDARIPGVYSGGAWEGAHATFYGGSDASGTMGGACGYGNLYSQGYGVSTAALSTALFNSGLSCGACFEIKCADDPKWCHPGNPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVACRKAGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGGNTGWMTMSRNWGQNWQSNSALVGQTLSFRVTGSDGRTSTSWNVAPSNWKFGQTFSGKNFRV | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6450942 | 6452192 | - | Bma031106 | Bma04g00671 | 81040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00671 | 259 | PRINTS | Expansin signature | 90 | 101 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 211 | 232 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 104 | 114 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 140 | 153 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 240 | 256 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 63 | 77 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 164 | 176 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 123 | 140 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | PRINTS | Expansin signature | 176 | 197 | IPR002963 | GO:0009664 | |
Bma04g00671 | 259 | SMART | dpbb_1 | 68 | 155 | IPR007112 | - | |
Bma04g00671 | 259 | SUPERFAMILY | PHL pollen allergen | 163 | 253 | IPR036749 | - | |
Bma04g00671 | 259 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 175 | 254 | IPR007117 | - | |
Bma04g00671 | 259 | Pfam | Expansin C-terminal domain | 166 | 243 | IPR007117 | - | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 50 | 68 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 32 | 47 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 72 | 90 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 202 | 216 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 148 | 164 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | PRINTS | Expansin/Lol pI family signature | 240 | 254 | IPR007118 | GO:0005576 | |
Bma04g00671 | 259 | Gene3D | - | 19 | 161 | IPR036908 | - | |
Bma04g00671 | 259 | PANTHER | EXPANSIN | 4 | 258 | - | - | |
Bma04g00671 | 259 | Pfam | Lytic transglycolase | 68 | 155 | IPR009009 | - | |
Bma04g00671 | 259 | Gene3D | - | 165 | 257 | IPR036749 | - | |
Bma04g00671 | 259 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 51 | 165 | IPR007112 | - | |
Bma04g00671 | 259 | SUPERFAMILY | Barwin-like endoglucanases | 32 | 183 | IPR036908 | - | |
Bma04g00671 | 259 | PANTHER | EXPANSIN-A15 | 4 | 258 | IPR002963 | GO:0009664 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g01865 | Bma04g00671 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00671 | Bma-Chr4:6450942 | Bma08g01113 | Bma-Chr8:50094989 | 1.35E-152 | dispersed | |
Bma01g01865 | Bma-Chr1:68418003 | Bma04g00671 | Bma-Chr4:6450942 | 3.95E-175 | wgd | |
Bma10g00298 | Bma-Chr10:2731295 | Bma04g00671 | Bma-Chr4:6450942 | 1.42E-41 | wgd | |
Bma11g00114 | Bma-Chr11:1110498 | Bma04g00671 | Bma-Chr4:6450942 | 1.22E-163 | wgd | |
Bma04g00671 | Bma-Chr4:6450942 | Bma07g00098 | Bma-Chr7:1745475 | 4.07E-163 | wgd | |
Bma04g00671 | Bma-Chr4:6450942 | Bma08g01001 | Bma-Chr8:49073113 | 3.49E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00671 | - | - | jre:109015812 | 475.707 |