Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00671 ATAATGGGCGCCGTAACTTTGCTCTGCTCTATTTCACTAGTGTTGCTGTTGGCGGTGGTCGATGCTAGAATCCCCGGAGTTTACTCCGGTGGTGCATGGGAGGGCGCACACGCTACTTTCTACGGCGGCAGTGACGCCTCCGGAACAATGGGCGGTGCTTGTGGGTATGGAAACCTGTACAGCCAAGGCTACGGAGTAAGCACTGCGGCACTGAGCACTGCTCTGTTCAACAGCGGGCTCAGTTGCGGTGCCTGCTTTGAGATTAAGTGCGCCGACGACCCAAAATGGTGTCACCCGGGTAACCCATCCATCTTCATCACCGCCACCAATTTCTGCCCTCCTAACTTCGCTCTACCTAACGACAATGGCGGCTGGTGCAACCCTCCCCGTCCCCATTTCGACCTCGCCATGCCAATGTTCCTCAAGATCGCCGAGTACCGCGCAGGAATAGTCCCTGTTTCCTTCCGCCGGGTGGCATGCAGAAAGGCAGGGGGAATCAGGTTCACGATCAACGGCTTCCGTTACTTCAACCTGGTTCTGATCACAAACGTCGCCGGTGCAGGTGATATCGTGCGCGTCAGCGTCAAGGGCGGAAACACTGGCTGGATGACCATGAGCCGGAACTGGGGGCAAAACTGGCAATCTAATTCCGCCTTGGTGGGCCAAACTCTTTCCTTTAGAGTCACGGGCAGTGACGGACGCACCTCTACGTCATGGAACGTGGCGCCATCCAATTGGAAGTTCGGTCAGACTTTCAGCGGGAAGAATTTCCGCGTC 777 56.5 IMGAVTLLCSISLVLLLAVVDARIPGVYSGGAWEGAHATFYGGSDASGTMGGACGYGNLYSQGYGVSTAALSTALFNSGLSCGACFEIKCADDPKWCHPGNPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVACRKAGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGGNTGWMTMSRNWGQNWQSNSALVGQTLSFRVTGSDGRTSTSWNVAPSNWKFGQTFSGKNFRV 259
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 6450942 6452192 - Bma031106 Bma04g00671 81040
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00671 259 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Bma04g00671 259 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Bma04g00671 259 SMART dpbb_1 68 155 IPR007112 -
Bma04g00671 259 SUPERFAMILY PHL pollen allergen 163 253 IPR036749 -
Bma04g00671 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Bma04g00671 259 Pfam Expansin C-terminal domain 166 243 IPR007117 -
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Bma04g00671 259 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Bma04g00671 259 Gene3D - 19 161 IPR036908 -
Bma04g00671 259 PANTHER EXPANSIN 4 258 - -
Bma04g00671 259 Pfam Lytic transglycolase 68 155 IPR009009 -
Bma04g00671 259 Gene3D - 165 257 IPR036749 -
Bma04g00671 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 165 IPR007112 -
Bma04g00671 259 SUPERFAMILY Barwin-like endoglucanases 32 183 IPR036908 -
Bma04g00671 259 PANTHER EXPANSIN-A15 4 258 IPR002963 GO:0009664
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bma01g01865 Bma04g00671 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00671 Bma-Chr4:6450942 Bma08g01113 Bma-Chr8:50094989 1.35E-152 dispersed
Bma01g01865 Bma-Chr1:68418003 Bma04g00671 Bma-Chr4:6450942 3.95E-175 wgd
Bma10g00298 Bma-Chr10:2731295 Bma04g00671 Bma-Chr4:6450942 1.42E-41 wgd
Bma11g00114 Bma-Chr11:1110498 Bma04g00671 Bma-Chr4:6450942 1.22E-163 wgd
Bma04g00671 Bma-Chr4:6450942 Bma07g00098 Bma-Chr7:1745475 4.07E-163 wgd
Bma04g00671 Bma-Chr4:6450942 Bma08g01001 Bma-Chr8:49073113 3.49E-162 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00671 - - jre:109015812 475.707